RNA–Protein interactions for RNA: ENST00000578922.1

SMG8-203, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

BASIC

Gene SMG8, Length 2,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-203ENST00000578922 ADAMTS1Q9UHI8 967 aa21.83■■□□□ 1.09
SMG8-203ENST00000578922 PCDHA13Q9Y5I0 950 aa21.83■■□□□ 1.09
SMG8-203ENST00000578922 ZEB2O60315 1214 aa21.82■■□□□ 1.08
SMG8-203ENST00000578922 CYP2C9P11712 490 aa21.82■■□□□ 1.08
SMG8-203ENST00000578922 YY1P25490 414 aa21.82■■□□□ 1.08
SMG8-203ENST00000578922 SOX5P35711 763 aa21.82■■□□□ 1.08
SMG8-203ENST00000578922 VEGFBP49765 207 aa21.82■■□□□ 1.08
SMG8-203ENST00000578922 PURAQ00577 322 aaKnown RBP21.82■■□□□ 1.08
SMG8-203ENST00000578922 ZNF571Q7Z3V5 609 aaPredicted RBP21.82■■□□□ 1.08
SMG8-203ENST00000578922 PPM1KQ8N3J5 372 aa21.82■■□□□ 1.08
SMG8-203ENST00000578922 NFKBIZQ9BYH8 718 aa21.82■■□□□ 1.08
SMG8-203ENST00000578922 RAB20Q9NX57 234 aa21.82■■□□□ 1.08
SMG8-203ENST00000578922 DUSP10Q9Y6W6 482 aa21.82■■□□□ 1.08
SMG8-203ENST00000578922 OGTO15294 1046 aa21.82■■□□□ 1.08
SMG8-203ENST00000578922 TREHO43280 583 aa21.82■■□□□ 1.08
SMG8-203ENST00000578922 GTF2H1P32780 548 aa21.82■■□□□ 1.08
SMG8-203ENST00000578922 HNRNPH2P55795 449 aaKnown RBP21.82■■□□□ 1.08
SMG8-203ENST00000578922 BIRC3Q13489 604 aa21.82■■□□□ 1.08
SMG8-203ENST00000578922 PTPRHQ9HD43 1115 aa21.82■■□□□ 1.08
SMG8-203ENST00000578922 MED4Q9NPJ6 270 aa21.82■■□□□ 1.08
SMG8-203ENST00000578922 CNTNAP2Q9UHC6 1331 aa21.81■■□□□ 1.08
SMG8-203ENST00000578922 HAS3O00219 553 aa21.81■■□□□ 1.08
SMG8-203ENST00000578922 FOXN3O00409 490 aaPredicted RBP21.81■■□□□ 1.08
SMG8-203ENST00000578922 PMM2O15305 246 aa21.81■■□□□ 1.08
SMG8-203ENST00000578922 EVI5O60447 810 aa21.81■■□□□ 1.08
SMG8-203ENST00000578922 TFRCP02786 760 aaKnown RBP21.81■■□□□ 1.08
SMG8-203ENST00000578922 PROZP22891 400 aa21.81■■□□□ 1.08
SMG8-203ENST00000578922 CCND3P30281 292 aaPredicted RBP21.81■■□□□ 1.08
SMG8-203ENST00000578922 AMHR2Q16671 573 aa21.81■■□□□ 1.08
SMG8-203ENST00000578922 REM2Q8IYK8 340 aaPredicted RBP21.81■■□□□ 1.08
SMG8-203ENST00000578922 OR5B17Q8NGF7 314 aa21.81■■□□□ 1.08
SMG8-203ENST00000578922 FAM71BQ8TC56 605 aa21.81■■□□□ 1.08
SMG8-203ENST00000578922 CDT1Q9H211 546 aa21.81■■□□□ 1.08
SMG8-203ENST00000578922 CDHR5Q9HBB8 845 aa21.81■■□□□ 1.08
SMG8-203ENST00000578922 HDAC6Q9UBN7 1215 aa21.81■■□□□ 1.08
SMG8-203ENST00000578922 BRCA2P51587 3418 aa21.81■■□□□ 1.08
SMG8-203ENST00000578922 A0A087X0T9 212 aa21.81■■□□□ 1.08
SMG8-203ENST00000578922 FAM170AA1A519 330 aa21.81■■□□□ 1.08
SMG8-203ENST00000578922 ATP1A1P05023 1023 aaKnown RBP21.81■■□□□ 1.08
SMG8-203ENST00000578922 FAM228BP0C875 321 aa21.81■■□□□ 1.08
SMG8-203ENST00000578922 PRKAR2AP13861 404 aaKnown RBP21.81■■□□□ 1.08
SMG8-203ENST00000578922 VAV2P52735 878 aa21.81■■□□□ 1.08
SMG8-203ENST00000578922 POU5F1BQ06416 359 aa21.81■■□□□ 1.08
SMG8-203ENST00000578922 KIF5AQ12840 1032 aa21.81■■□□□ 1.08
SMG8-203ENST00000578922 HSP90B2PQ58FF3 399 aa21.81■■□□□ 1.08
SMG8-203ENST00000578922 TDRD10Q5VZ19 366 aaKnown RBP21.81■■□□□ 1.08
SMG8-203ENST00000578922 CXCL17Q6UXB2 119 aa21.81■■□□□ 1.08
SMG8-203ENST00000578922 DNAJB3Q8WWF6 145 aa21.81■■□□□ 1.08
SMG8-203ENST00000578922 COQ4Q9Y3A0 265 aa21.81■■□□□ 1.08
SMG8-203ENST00000578922 CLSTN1O94985 981 aa21.8■■□□□ 1.08
SMG8-203ENST00000578922 USP8P40818 1118 aa21.8■■□□□ 1.08
SMG8-203ENST00000578922 MAGEA1P43355 309 aa21.8■■□□□ 1.08
SMG8-203ENST00000578922 CLDN10P78369 228 aa21.8■■□□□ 1.08
SMG8-203ENST00000578922 BRSK2Q8IWQ3 736 aa21.8■■□□□ 1.08
SMG8-203ENST00000578922 TMEM192Q8IY95 271 aa21.8■■□□□ 1.08
SMG8-203ENST00000578922 C7orf31Q8N865 590 aa21.8■■□□□ 1.08
SMG8-203ENST00000578922 TATDN2Q93075 761 aa21.8■■□□□ 1.08
SMG8-203ENST00000578922 TNFSF13BQ9Y275 285 aa21.8■■□□□ 1.08
SMG8-203ENST00000578922 GPR25O00155 361 aa21.8■■□□□ 1.08
SMG8-203ENST00000578922 LCA5LO95447 670 aa21.8■■□□□ 1.08
SMG8-203ENST00000578922 RARBP10826 455 aa21.8■■□□□ 1.08
SMG8-203ENST00000578922 FERP16591 822 aa21.8■■□□□ 1.08
SMG8-203ENST00000578922 ARF4P18085 180 aaPredicted RBP21.8■■□□□ 1.08
SMG8-203ENST00000578922 SCARA3Q6AZY7 606 aa21.8■■□□□ 1.08
SMG8-203ENST00000578922 C15orf39Q6ZRI6 1047 aa21.8■■□□□ 1.08
SMG8-203ENST00000578922 DNAAF5Q86Y56 855 aa21.8■■□□□ 1.08
SMG8-203ENST00000578922 IFNLR1Q8IU57 520 aaPredicted RBP21.8■■□□□ 1.08
SMG8-203ENST00000578922 OSMRQ99650 979 aa21.8■■□□□ 1.08
SMG8-203ENST00000578922 CGRRF1Q99675 332 aa21.8■■□□□ 1.08
SMG8-203ENST00000578922 CPSF3Q9UKF6 684 aaKnown RBP21.8■■□□□ 1.08
SMG8-203ENST00000578922 TRIP12Q14669 1992 aaPredicted RBP21.79■■□□□ 1.08
SMG8-203ENST00000578922 MBLAC1A4D2B0 266 aaPredicted RBP21.79■■□□□ 1.08
SMG8-203ENST00000578922 ENC1O14682 589 aa21.79■■□□□ 1.08
SMG8-203ENST00000578922 SEPT4O43236 478 aa21.79■■□□□ 1.08
SMG8-203ENST00000578922 ERLIN2O94905 339 aa21.79■■□□□ 1.08
SMG8-203ENST00000578922 C4BPAP04003 597 aaKnown RBP21.79■■□□□ 1.08
SMG8-203ENST00000578922 PIK3CAP42336 1068 aa21.79■■□□□ 1.08
SMG8-203ENST00000578922 GJA9P57773 515 aa21.79■■□□□ 1.08
SMG8-203ENST00000578922 ZACNQ401N2 412 aa21.79■■□□□ 1.08
SMG8-203ENST00000578922 KREMEN1Q96MU8 473 aa21.79■■□□□ 1.08
SMG8-203ENST00000578922 NT5C1BQ96P26 610 aa21.79■■□□□ 1.08
SMG8-203ENST00000578922 KATNAL1Q9BW62 490 aa21.79■■□□□ 1.08
SMG8-203ENST00000578922 PDZD7Q9H5P4 517 aa21.79■■□□□ 1.08
SMG8-203ENST00000578922 MACROD2A1Z1Q3 448 aa21.78■■□□□ 1.08
SMG8-203ENST00000578922 C17orf102A2RUQ5 167 aa21.78■■□□□ 1.08
SMG8-203ENST00000578922 TSPAN1O60635 241 aa21.78■■□□□ 1.08
SMG8-203ENST00000578922 HLA-DRAP01903 254 aa21.78■■□□□ 1.08
SMG8-203ENST00000578922 RFX1P22670 979 aa21.78■■□□□ 1.08
SMG8-203ENST00000578922 SLC18A3Q16572 532 aa21.78■■□□□ 1.08
SMG8-203ENST00000578922 FAM187BQ17R55 369 aa21.78■■□□□ 1.08
SMG8-203ENST00000578922 MMS19Q96T76 1030 aa21.78■■□□□ 1.08
SMG8-203ENST00000578922 ADAMTS10Q9H324 1103 aa21.78■■□□□ 1.08
SMG8-203ENST00000578922 SRRDQ9UH36 339 aa21.78■■□□□ 1.08
SMG8-203ENST00000578922 BZW2Q9Y6E2 419 aaKnown RBP21.78■■□□□ 1.08
SMG8-203ENST00000578922 VNN1O95497 513 aa21.78■■□□□ 1.08
SMG8-203ENST00000578922 PRKCIP41743 596 aa21.78■■□□□ 1.08
SMG8-203ENST00000578922 ENPEPQ07075 957 aa21.78■■□□□ 1.08
SMG8-203ENST00000578922 SPOPLQ6IQ16 392 aa21.78■■□□□ 1.08
SMG8-203ENST00000578922 TRIM58Q8NG06 486 aa21.78■■□□□ 1.08
SMG8-203ENST00000578922 HELQQ8TDG4 1101 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms