RNA–Protein interactions for RNA: ENST00000578896.1

GGA3-207, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-207ENST00000578896 CDY1Q9Y6F8 540 aa9.82□□□□□ -0.84
GGA3-207ENST00000578896 ZNF292O60281 2723 aa9.82□□□□□ -0.84
GGA3-207ENST00000578896 ZMYM2Q9UBW7 1377 aa9.81□□□□□ -0.84
GGA3-207ENST00000578896 NPHP3-ACAD11A0A0J9YXS1 232 aa9.81□□□□□ -0.84
GGA3-207ENST00000578896 PRR23AA6NEV1 266 aa9.81□□□□□ -0.84
GGA3-207ENST00000578896 ANHXE9PGG2 379 aa9.81□□□□□ -0.84
GGA3-207ENST00000578896 SLC16A4O15374 487 aa9.81□□□□□ -0.84
GGA3-207ENST00000578896 SRFP11831 508 aa9.81□□□□□ -0.84
GGA3-207ENST00000578896 U2AF2P26368 475 aaKnown RBP eCLIP9.81□□□□□ -0.84
GGA3-207ENST00000578896 NBL1P41271 181 aa9.81□□□□□ -0.84
GGA3-207ENST00000578896 TRAPPC10P48553 1259 aa9.81□□□□□ -0.84
GGA3-207ENST00000578896 EFNA5P52803 228 aa9.81□□□□□ -0.84
GGA3-207ENST00000578896 NUBP1P53384 320 aa9.81□□□□□ -0.84
GGA3-207ENST00000578896 ARPP19P56211 112 aa9.81□□□□□ -0.84
GGA3-207ENST00000578896 CACNB1Q02641 598 aaPredicted RBP9.81□□□□□ -0.84
GGA3-207ENST00000578896 CREMQ03060 361 aa9.81□□□□□ -0.84
GGA3-207ENST00000578896 MAPK7Q13164 816 aa9.81□□□□□ -0.84
GGA3-207ENST00000578896 ORC2Q13416 577 aaPredicted RBP9.81□□□□□ -0.84
GGA3-207ENST00000578896 ANGPT1Q15389 498 aa9.81□□□□□ -0.84
GGA3-207ENST00000578896 ZNF568Q3ZCX4 644 aa9.81□□□□□ -0.84
GGA3-207ENST00000578896 C8orf34Q49A92 452 aa9.81□□□□□ -0.84
GGA3-207ENST00000578896 KRT79Q5XKE5 535 aa9.81□□□□□ -0.84
GGA3-207ENST00000578896 MCTP1Q6DN14 999 aa9.81□□□□□ -0.84
GGA3-207ENST00000578896 RINT1Q6NUQ1 792 aa9.81□□□□□ -0.84
GGA3-207ENST00000578896 DCLRE1AQ6PJP8 1040 aa9.81□□□□□ -0.84
GGA3-207ENST00000578896 POTEHQ6S545 545 aa9.81□□□□□ -0.84
GGA3-207ENST00000578896 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.81□□□□□ -0.84
GGA3-207ENST00000578896 C1orf186Q6ZWK4 172 aa9.81□□□□□ -0.84
GGA3-207ENST00000578896 CCDC105Q8IYK2 499 aa9.81□□□□□ -0.84
GGA3-207ENST00000578896 GPR65Q8IYL9 337 aa9.81□□□□□ -0.84
GGA3-207ENST00000578896 IGSF22Q8N9C0 903 aa9.81□□□□□ -0.84
GGA3-207ENST00000578896 C18orf25Q96B23 403 aaPredicted RBP9.81□□□□□ -0.84
GGA3-207ENST00000578896 DDX27Q96GQ7 796 aaKnown RBP9.81□□□□□ -0.84
GGA3-207ENST00000578896 PNMA5Q96PV4 448 aa9.81□□□□□ -0.84
GGA3-207ENST00000578896 TCHPQ9BT92 498 aa9.81□□□□□ -0.84
GGA3-207ENST00000578896 RHOBTB2Q9BYZ6 727 aa9.81□□□□□ -0.84
GGA3-207ENST00000578896 FOXQ1Q9C009 403 aa9.81□□□□□ -0.84
GGA3-207ENST00000578896 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.81□□□□□ -0.84
GGA3-207ENST00000578896 DNMT3BQ9UBC3 853 aaKnown RBP9.81□□□□□ -0.84
GGA3-207ENST00000578896 WNT16Q9UBV4 365 aa9.81□□□□□ -0.84
GGA3-207ENST00000578896 DNM3Q9UQ16 869 aa9.81□□□□□ -0.84
GGA3-207ENST00000578896 TNFSF13BQ9Y275 285 aa9.81□□□□□ -0.84
GGA3-207ENST00000578896 SDK1Q7Z5N4 2213 aa9.8□□□□□ -0.84
GGA3-207ENST00000578896 PODXLO00592 558 aa9.8□□□□□ -0.84
GGA3-207ENST00000578896 NRG2O14511 850 aaPredicted RBP9.8□□□□□ -0.84
GGA3-207ENST00000578896 PAPLNO95428 1278 aa9.8□□□□□ -0.84
GGA3-207ENST00000578896 MUTP22033 750 aa9.8□□□□□ -0.84
GGA3-207ENST00000578896 GRM5P41594 1212 aa9.8□□□□□ -0.84
GGA3-207ENST00000578896 SPAG1Q07617 926 aa9.8□□□□□ -0.84
GGA3-207ENST00000578896 ELAVL2Q12926 359 aaKnown RBP9.8□□□□□ -0.84
GGA3-207ENST00000578896 SNW1Q13573 536 aaKnown RBP9.8□□□□□ -0.84
GGA3-207ENST00000578896 RAB33AQ14088 237 aa9.8□□□□□ -0.84
GGA3-207ENST00000578896 PDIA5Q14554 519 aa9.8□□□□□ -0.84
GGA3-207ENST00000578896 UPP1Q16831 310 aa9.8□□□□□ -0.84
GGA3-207ENST00000578896 ERICH6BQ5W0A0 696 aa9.8□□□□□ -0.84
GGA3-207ENST00000578896 ALKAL1Q6UXT8 129 aa9.8□□□□□ -0.84
GGA3-207ENST00000578896 DTHD1Q6ZMT9 781 aa9.8□□□□□ -0.84
GGA3-207ENST00000578896 FGF13Q92913 245 aa9.8□□□□□ -0.84
GGA3-207ENST00000578896 MCRS1Q96EZ8 462 aa9.8□□□□□ -0.84
GGA3-207ENST00000578896 KXD1Q9BQD3 176 aa9.8□□□□□ -0.84
GGA3-207ENST00000578896 RTP3Q9BQQ7 232 aa9.8□□□□□ -0.84
GGA3-207ENST00000578896 CCDC94Q9BW85 323 aaPredicted RBP9.8□□□□□ -0.84
GGA3-207ENST00000578896 MRPL4Q9BYD3 311 aaKnown RBP9.8□□□□□ -0.84
GGA3-207ENST00000578896 PTPRHQ9HD43 1115 aa9.8□□□□□ -0.84
GGA3-207ENST00000578896 KMT5AQ9NQR1 393 aa9.8□□□□□ -0.84
GGA3-207ENST00000578896 ARHGEF3Q9NR81 526 aa9.8□□□□□ -0.84
GGA3-207ENST00000578896 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.8□□□□□ -0.84
GGA3-207ENST00000578896 SH2B1Q9NRF2 756 aaPredicted RBP9.8□□□□□ -0.84
GGA3-207ENST00000578896 MTRRQ9UBK8 725 aa9.8□□□□□ -0.84
GGA3-207ENST00000578896 CDH7Q9ULB5 785 aa9.8□□□□□ -0.84
GGA3-207ENST00000578896 R4GN57 208 aa9.8□□□□□ -0.84
GGA3-207ENST00000578896 MIA3Q5JRA6 1907 aa9.8□□□□□ -0.84
GGA3-207ENST00000578896 FRYLO94915 3013 aa9.8□□□□□ -0.84
GGA3-207ENST00000578896 DCHS1Q96JQ0 3298 aa9.8□□□□□ -0.84
GGA3-207ENST00000578896 PROB1E7EW31 1015 aa9.79□□□□□ -0.84
GGA3-207ENST00000578896 TMEM189-UBE2V1I3L0A0 370 aa9.79□□□□□ -0.84
GGA3-207ENST00000578896 ABLIM1O14639 778 aa9.79□□□□□ -0.84
GGA3-207ENST00000578896 XYLBO75191 536 aa9.79□□□□□ -0.84
GGA3-207ENST00000578896 CD2BP2O95400 341 aaKnown RBP9.79□□□□□ -0.84
GGA3-207ENST00000578896 C1RP00736 705 aa9.79□□□□□ -0.84
GGA3-207ENST00000578896 HNRNPA1P09651 372 aaKnown RBP eCLIP9.79□□□□□ -0.84
GGA3-207ENST00000578896 GLULP15104 373 aa9.79□□□□□ -0.84
GGA3-207ENST00000578896 CD72P21854 359 aa9.79□□□□□ -0.84
GGA3-207ENST00000578896 YARSP54577 528 aaKnown RBP9.79□□□□□ -0.84
GGA3-207ENST00000578896 DMP1Q13316 513 aaPredicted RBP9.79□□□□□ -0.84
GGA3-207ENST00000578896 SLC5A9Q2M3M2 681 aa9.79□□□□□ -0.84
GGA3-207ENST00000578896 VARS2Q5ST30 1063 aaKnown RBP9.79□□□□□ -0.84
GGA3-207ENST00000578896 ADSSL1Q8N142 457 aa9.79□□□□□ -0.84
GGA3-207ENST00000578896 NKD2Q969F2 451 aaPredicted RBP9.79□□□□□ -0.84
GGA3-207ENST00000578896 SNX27Q96L92 541 aa9.79□□□□□ -0.84
GGA3-207ENST00000578896 ACAP3Q96P50 834 aa9.79□□□□□ -0.84
GGA3-207ENST00000578896 PLA2G2FQ9BZM2 168 aa9.79□□□□□ -0.84
GGA3-207ENST00000578896 TMEM134Q9H6X4 195 aa9.79□□□□□ -0.84
GGA3-207ENST00000578896 ARHGAP28Q9P2N2 729 aa9.79□□□□□ -0.84
GGA3-207ENST00000578896 ANKFY1Q9P2R3 1169 aa9.79□□□□□ -0.84
GGA3-207ENST00000578896 MTF2Q9Y483 593 aaPredicted RBP9.79□□□□□ -0.84
GGA3-207ENST00000578896 PHLPP2Q6ZVD8 1323 aa9.79□□□□□ -0.84
GGA3-207ENST00000578896 ANK1P16157 1881 aa9.79□□□□□ -0.84
GGA3-207ENST00000578896 PDCD11Q14690 1871 aaKnown RBP9.79□□□□□ -0.84
GGA3-207ENST00000578896 WDR27A2RRH5 827 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms