RNA–Protein interactions for RNA: ENST00000578773.1

GGA3-206, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-206ENST00000578773 BMP2KQ9NSY1 1161 aaPredicted RBP12.39□□□□□ -0.43
GGA3-206ENST00000578773 PTPN13Q12923 2485 aa12.39□□□□□ -0.43
GGA3-206ENST00000578773 MGAQ8IWI9 3026 aa12.39□□□□□ -0.43
GGA3-206ENST00000578773 SF3B1O75533 1304 aaKnown RBP eCLIP12.38□□□□□ -0.436e-8■■■■■ 80.2
GGA3-206ENST00000578773 ERICH2A1L162 156 aa12.38□□□□□ -0.43
GGA3-206ENST00000578773 MYBPHLA2RUH7 354 aa12.38□□□□□ -0.43
GGA3-206ENST00000578773 BCKDHBP21953 392 aa12.38□□□□□ -0.43
GGA3-206ENST00000578773 NAPAP54920 295 aa12.38□□□□□ -0.43
GGA3-206ENST00000578773 HNRNPUQ00839 825 aaKnown RBP eCLIP12.38□□□□□ -0.43
GGA3-206ENST00000578773 TNK2Q07912 1038 aa12.38□□□□□ -0.43
GGA3-206ENST00000578773 DGKKQ5KSL6 1271 aa12.38□□□□□ -0.43
GGA3-206ENST00000578773 RAB44Q7Z6P3 723 aaPredicted RBP12.38□□□□□ -0.43
GGA3-206ENST00000578773 PIP4P1Q86T03 277 aa12.38□□□□□ -0.43
GGA3-206ENST00000578773 ZSCAN18Q8TBC5 510 aaPredicted RBP12.38□□□□□ -0.43
GGA3-206ENST00000578773 LENG9Q96B70 501 aa12.38□□□□□ -0.43
GGA3-206ENST00000578773 UNC45AQ9H3U1 944 aa12.38□□□□□ -0.43
GGA3-206ENST00000578773 CHMP4BQ9H444 224 aaKnown RBP12.38□□□□□ -0.43
GGA3-206ENST00000578773 AVENQ9NQS1 362 aaPredicted RBP12.38□□□□□ -0.43
GGA3-206ENST00000578773 DISC1Q9NRI5 854 aa12.38□□□□□ -0.43
GGA3-206ENST00000578773 RAI2Q9Y5P3 530 aa12.38□□□□□ -0.43
GGA3-206ENST00000578773 CDY1Q9Y6F8 540 aa12.38□□□□□ -0.43
GGA3-206ENST00000578773 OBSL1O75147 1896 aa12.38□□□□□ -0.43
GGA3-206ENST00000578773 EDIL3O43854 480 aa12.37□□□□□ -0.43
GGA3-206ENST00000578773 TSPAN1O60635 241 aa12.37□□□□□ -0.43
GGA3-206ENST00000578773 DDAH1O94760 285 aa12.37□□□□□ -0.43
GGA3-206ENST00000578773 SEC24AO95486 1093 aa12.37□□□□□ -0.43
GGA3-206ENST00000578773 SRGAP2CP0DJJ0 459 aa12.37□□□□□ -0.43
GGA3-206ENST00000578773 PTPN2P17706 415 aa12.37□□□□□ -0.43
GGA3-206ENST00000578773 SMARCA1P28370 1054 aa12.37□□□□□ -0.43
GGA3-206ENST00000578773 ADCY7P51828 1080 aa12.37□□□□□ -0.43
GGA3-206ENST00000578773 NAIF1Q69YI7 327 aaPredicted RBP12.37□□□□□ -0.43
GGA3-206ENST00000578773 MARCH9Q86YJ5 346 aa12.37□□□□□ -0.43
GGA3-206ENST00000578773 MFSD6LQ8IWD5 586 aa12.37□□□□□ -0.43
GGA3-206ENST00000578773 MB21D2Q8IYB1 491 aaPredicted RBP12.37□□□□□ -0.43
GGA3-206ENST00000578773 CSGALNACT1Q8TDX6 532 aa12.37□□□□□ -0.43
GGA3-206ENST00000578773 DEPDC1BQ8WUY9 529 aa12.37□□□□□ -0.43
GGA3-206ENST00000578773 CHFRQ96EP1 664 aa12.37□□□□□ -0.43
GGA3-206ENST00000578773 INO80BQ9C086 356 aaPredicted RBP12.37□□□□□ -0.43
GGA3-206ENST00000578773 TCEAL9Q9UHQ7 104 aa12.37□□□□□ -0.43
GGA3-206ENST00000578773 PLXND1Q9Y4D7 1925 aa12.37□□□□□ -0.43
GGA3-206ENST00000578773 CNTNAP5Q8WYK1 1306 aa12.37□□□□□ -0.43
GGA3-206ENST00000578773 USP9XQ93008 2570 aaPredicted RBP12.36□□□□□ -0.43
GGA3-206ENST00000578773 GOLGA4Q13439 2230 aaKnown RBP12.36□□□□□ -0.43
GGA3-206ENST00000578773 WDR64B1ANS9 1081 aa12.36□□□□□ -0.43
GGA3-206ENST00000578773 E7EWF7 191 aa12.36□□□□□ -0.43
GGA3-206ENST00000578773 I3L4J1 428 aa12.36□□□□□ -0.43
GGA3-206ENST00000578773 KHNYNO15037 678 aaKnown RBP12.36□□□□□ -0.43
GGA3-206ENST00000578773 MAFO75444 373 aaPredicted RBP12.36□□□□□ -0.43
GGA3-206ENST00000578773 AKAP3O75969 853 aa12.36□□□□□ -0.43
GGA3-206ENST00000578773 CALM1P0DP23 149 aa12.36□□□□□ -0.43
GGA3-206ENST00000578773 CALM2P0DP24 149 aa12.36□□□□□ -0.43
GGA3-206ENST00000578773 CALM3P0DP25 149 aa12.36□□□□□ -0.43
GGA3-206ENST00000578773 PTH1RQ03431 593 aa12.36□□□□□ -0.43
GGA3-206ENST00000578773 TEAD2Q15562 447 aa12.36□□□□□ -0.43
GGA3-206ENST00000578773 UVSSAQ2YD98 709 aa12.36□□□□□ -0.43
GGA3-206ENST00000578773 PRR16Q569H4 304 aa12.36□□□□□ -0.43
GGA3-206ENST00000578773 STXBP5Q5T5C0 1151 aa12.36□□□□□ -0.43
GGA3-206ENST00000578773 FSTL4Q6MZW2 842 aa12.36□□□□□ -0.43
GGA3-206ENST00000578773 TMTC3Q6ZXV5 915 aa12.36□□□□□ -0.43
GGA3-206ENST00000578773 PNPLA1Q8N8W4 532 aa12.36□□□□□ -0.43
GGA3-206ENST00000578773 SLC39A7Q92504 469 aa12.36□□□□□ -0.43
GGA3-206ENST00000578773 TMEM143Q96AN5 459 aa12.36□□□□□ -0.43
GGA3-206ENST00000578773 MAP3K14Q99558 947 aa12.36□□□□□ -0.43
GGA3-206ENST00000578773 NIFKQ9BYG3 293 aaKnown RBP12.36□□□□□ -0.43
GGA3-206ENST00000578773 CCDC86Q9H6F5 360 aaKnown RBP12.36□□□□□ -0.43
GGA3-206ENST00000578773 DIAPH3Q9NSV4 1193 aa12.36□□□□□ -0.43
GGA3-206ENST00000578773 TBC1D22BQ9NU19 505 aa12.36□□□□□ -0.43
GGA3-206ENST00000578773 MTRRQ9UBK8 725 aa12.36□□□□□ -0.43
GGA3-206ENST00000578773 COL4A3BPQ9Y5P4 624 aa12.36□□□□□ -0.43
GGA3-206ENST00000578773 TEX15Q9BXT5 2789 aa12.35□□□□□ -0.43
GGA3-206ENST00000578773 COL5A1P20908 1838 aaPredicted RBP12.35□□□□□ -0.43
GGA3-206ENST00000578773 CCDC163A0A0D9SF12 145 aa12.35□□□□□ -0.43
GGA3-206ENST00000578773 CCDC194A0A1B0GVG4 234 aa12.35□□□□□ -0.43
GGA3-206ENST00000578773 ARHGEF37A1IGU5 675 aa12.35□□□□□ -0.43
GGA3-206ENST00000578773 NR1I2O75469 434 aa12.35□□□□□ -0.43
GGA3-206ENST00000578773 MYL4P12829 197 aa12.35□□□□□ -0.43
GGA3-206ENST00000578773 TKTP29401 623 aaKnown RBP12.35□□□□□ -0.43
GGA3-206ENST00000578773 GBP1P32455 592 aa12.35□□□□□ -0.43
GGA3-206ENST00000578773 NPEPPSP55786 919 aa12.35□□□□□ -0.43
GGA3-206ENST00000578773 GRIK3Q13003 919 aa12.35□□□□□ -0.43
GGA3-206ENST00000578773 ELF2Q15723 593 aa12.35□□□□□ -0.43
GGA3-206ENST00000578773 PMS2CLQ68D20 193 aa12.35□□□□□ -0.43
GGA3-206ENST00000578773 ZNF843Q8N446 348 aa12.35□□□□□ -0.43
GGA3-206ENST00000578773 OR2I1PQ8NGU4 316 aa12.35□□□□□ -0.43
GGA3-206ENST00000578773 PRPF31Q8WWY3 499 aaKnown RBP12.35□□□□□ -0.43
GGA3-206ENST00000578773 CAMK1GQ96NX5 476 aa12.35□□□□□ -0.43
GGA3-206ENST00000578773 C8orf33Q9H7E9 229 aaPredicted RBP12.35□□□□□ -0.43
GGA3-206ENST00000578773 UBN1Q9NPG3 1134 aa12.35□□□□□ -0.43
GGA3-206ENST00000578773 MBD1Q9UIS9 605 aaPredicted RBP12.35□□□□□ -0.43
GGA3-206ENST00000578773 SLC8A2Q9UPR5 921 aa12.35□□□□□ -0.43
GGA3-206ENST00000578773 ANK1P16157 1881 aa12.34□□□□□ -0.43
GGA3-206ENST00000578773 ANTXRLA6NF34 631 aa12.34□□□□□ -0.43
GGA3-206ENST00000578773 SMCO2A6NFE2 343 aa12.34□□□□□ -0.43
GGA3-206ENST00000578773 PTGESO14684 152 aa12.34□□□□□ -0.43
GGA3-206ENST00000578773 MSH4O15457 936 aa12.34□□□□□ -0.43
GGA3-206ENST00000578773 B4GALT5O43286 388 aa12.34□□□□□ -0.43
GGA3-206ENST00000578773 FOSP01100 380 aaPredicted RBP12.34□□□□□ -0.43
GGA3-206ENST00000578773 PRKCBP05771 671 aa12.34□□□□□ -0.43
GGA3-206ENST00000578773 CYP3A4P08684 503 aa12.34□□□□□ -0.43
GGA3-206ENST00000578773 U2AF2P26368 475 aaKnown RBP eCLIP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms