RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 MMP3P08254 477 aa11.94□□□□□ -0.5
SKA2-204ENST00000578519 CYP11B1P15538 503 aa11.94□□□□□ -0.5
SKA2-204ENST00000578519 CUL2Q13617 745 aa11.94□□□□□ -0.5
SKA2-204ENST00000578519 NCOA4Q13772 614 aa11.94□□□□□ -0.5
SKA2-204ENST00000578519 GRIK4Q16099 956 aa11.94□□□□□ -0.5
SKA2-204ENST00000578519 MORN1Q5T089 497 aa11.94□□□□□ -0.5
SKA2-204ENST00000578519 CST9Q5W186 159 aa11.94□□□□□ -0.5
SKA2-204ENST00000578519 ACAD10Q6JQN1 1059 aa11.94□□□□□ -0.5
SKA2-204ENST00000578519 SLFN11Q7Z7L1 901 aa11.94□□□□□ -0.5
SKA2-204ENST00000578519 ZBTB33Q86T24 672 aa11.94□□□□□ -0.5
SKA2-204ENST00000578519 CREG2Q8IUH2 290 aa11.94□□□□□ -0.5
SKA2-204ENST00000578519 ZSWIM2Q8NEG5 633 aa11.94□□□□□ -0.5
SKA2-204ENST00000578519 SLC35G2Q8TBE7 412 aa11.94□□□□□ -0.5
SKA2-204ENST00000578519 NLRP7Q8WX94 980 aa11.94□□□□□ -0.5
SKA2-204ENST00000578519 KREMEN1Q96MU8 473 aa11.94□□□□□ -0.5
SKA2-204ENST00000578519 MMS19Q96T76 1030 aa11.94□□□□□ -0.5
SKA2-204ENST00000578519 PTPN18Q99952 460 aa11.94□□□□□ -0.5
SKA2-204ENST00000578519 C16orf70Q9BSU1 422 aa11.94□□□□□ -0.5
SKA2-204ENST00000578519 PACSIN1Q9BY11 444 aa11.94□□□□□ -0.5
SKA2-204ENST00000578519 GCOM2Q9BZD3 368 aaPredicted RBP11.94□□□□□ -0.5
SKA2-204ENST00000578519 KATNBL1Q9H079 304 aa11.94□□□□□ -0.5
SKA2-204ENST00000578519 R3HDMLQ9H3Y0 253 aa11.94□□□□□ -0.5
SKA2-204ENST00000578519 RNPEPQ9H4A4 650 aa11.94□□□□□ -0.5
SKA2-204ENST00000578519 ASB7Q9H672 318 aa11.94□□□□□ -0.5
SKA2-204ENST00000578519 CPA4Q9UI42 421 aa11.94□□□□□ -0.5
SKA2-204ENST00000578519 CPSF3Q9UKF6 684 aaKnown RBP11.94□□□□□ -0.5
SKA2-204ENST00000578519 PCDHB4Q9Y5E5 795 aa11.94□□□□□ -0.5
SKA2-204ENST00000578519 CNTNAP2Q9UHC6 1331 aa11.93□□□□□ -0.5
SKA2-204ENST00000578519 CCDC188H7C350 402 aa11.93□□□□□ -0.5
SKA2-204ENST00000578519 DYNC1LI2O43237 492 aaPredicted RBP11.93□□□□□ -0.5
SKA2-204ENST00000578519 SRGAP2O75044 1071 aa11.93□□□□□ -0.5
SKA2-204ENST00000578519 FTCDO95954 541 aa11.93□□□□□ -0.5
SKA2-204ENST00000578519 RPLP2P05387 115 aaKnown RBP11.93□□□□□ -0.5
SKA2-204ENST00000578519 RHOXF2BP0C7M4 288 aa11.93□□□□□ -0.5
SKA2-204ENST00000578519 SMPD1P17405 629 aa11.93□□□□□ -0.5
SKA2-204ENST00000578519 ABCB4P21439 1286 aa11.93□□□□□ -0.5
SKA2-204ENST00000578519 PROZP22891 400 aa11.93□□□□□ -0.5
SKA2-204ENST00000578519 ATICP31939 592 aa11.93□□□□□ -0.5
SKA2-204ENST00000578519 CLCN3P51790 818 aa11.93□□□□□ -0.5
SKA2-204ENST00000578519 DCAF4L1Q3SXM0 396 aa11.93□□□□□ -0.5
SKA2-204ENST00000578519 LCE2DQ5TA82 110 aaPredicted RBP11.93□□□□□ -0.5
SKA2-204ENST00000578519 TDRD10Q5VZ19 366 aaKnown RBP11.93□□□□□ -0.5
SKA2-204ENST00000578519 C11orf63Q6NUN7 778 aa11.93□□□□□ -0.5
SKA2-204ENST00000578519 NFRKBQ6P4R8 1299 aa11.93□□□□□ -0.5
SKA2-204ENST00000578519 HDXQ7Z353 690 aa11.93□□□□□ -0.5
SKA2-204ENST00000578519 IFNL1Q8IU54 200 aa11.93□□□□□ -0.5
SKA2-204ENST00000578519 SPATA4Q8NEY3 305 aa11.93□□□□□ -0.5
SKA2-204ENST00000578519 NPLOC4Q8TAT6 608 aa11.93□□□□□ -0.5
SKA2-204ENST00000578519 EPS8L1Q8TE68 723 aa11.93□□□□□ -0.5
SKA2-204ENST00000578519 ZNF516Q92618 1163 aa11.93□□□□□ -0.5
SKA2-204ENST00000578519 TATDN2Q93075 761 aa11.93□□□□□ -0.5
SKA2-204ENST00000578519 FAM212AQ96EL1 285 aa11.93□□□□□ -0.5
SKA2-204ENST00000578519 VCPIP1Q96JH7 1222 aa11.93□□□□□ -0.5
SKA2-204ENST00000578519 RPS6KC1Q96S38 1066 aa11.93□□□□□ -0.5
SKA2-204ENST00000578519 TSPAN18Q96SJ8 248 aa11.93□□□□□ -0.5
SKA2-204ENST00000578519 RHOXF2Q9BQY4 288 aa11.93□□□□□ -0.5
SKA2-204ENST00000578519 SPC25Q9HBM1 224 aa11.93□□□□□ -0.5
SKA2-204ENST00000578519 TOPORSQ9NS56 1045 aaPredicted RBP11.93□□□□□ -0.5
SKA2-204ENST00000578519 SALL4Q9UJQ4 1053 aa11.93□□□□□ -0.5
SKA2-204ENST00000578519 GTF3C4Q9UKN8 822 aa11.93□□□□□ -0.5
SKA2-204ENST00000578519 CEP83Q9Y592 693 aa11.93□□□□□ -0.5
SKA2-204ENST00000578519 LRRC37A2A6NM11 1700 aa11.92□□□□□ -0.5
SKA2-204ENST00000578519 SMIM35A0A1B0GVV1 85 aa11.92□□□□□ -0.5
SKA2-204ENST00000578519 A6NJR5 290 aa11.92□□□□□ -0.5
SKA2-204ENST00000578519 KCNK3O14649 394 aa11.92□□□□□ -0.5
SKA2-204ENST00000578519 MED7O43513 233 aa11.92□□□□□ -0.5
SKA2-204ENST00000578519 MTA2O94776 668 aa11.92□□□□□ -0.5
SKA2-204ENST00000578519 SLC10A3P09131 477 aa11.92□□□□□ -0.5
SKA2-204ENST00000578519 PNMA6AP0CW24 399 aaPredicted RBP11.92□□□□□ -0.5
SKA2-204ENST00000578519 HSPA6P17066 643 aa11.92□□□□□ -0.5
SKA2-204ENST00000578519 AXLP30530 894 aa11.92□□□□□ -0.5
SKA2-204ENST00000578519 NOP14P78316 857 aaKnown RBP11.92□□□□□ -0.5
SKA2-204ENST00000578519 MBTD1Q05BQ5 628 aa11.92□□□□□ -0.5
SKA2-204ENST00000578519 DRP2Q13474 957 aa11.92□□□□□ -0.5
SKA2-204ENST00000578519 CLEC16AQ2KHT3 1053 aa11.92□□□□□ -0.5
SKA2-204ENST00000578519 C17orf99Q6UX52 265 aa11.92□□□□□ -0.5
SKA2-204ENST00000578519 NOP9Q86U38 636 aaKnown RBP11.92□□□□□ -0.5
SKA2-204ENST00000578519 THNSL1Q8IYQ7 743 aa11.92□□□□□ -0.5
SKA2-204ENST00000578519 LINC01465Q8N7H1 131 aa11.92□□□□□ -0.5
SKA2-204ENST00000578519 LRRC57Q8N9N7 239 aa11.92□□□□□ -0.5
SKA2-204ENST00000578519 LRRN4CLQ8ND94 238 aa11.92□□□□□ -0.5
SKA2-204ENST00000578519 ACTRT1Q8TDG2 376 aa11.92□□□□□ -0.5
SKA2-204ENST00000578519 TRAPPC12Q8WVT3 735 aa11.92□□□□□ -0.5
SKA2-204ENST00000578519 APBA2Q99767 749 aa11.92□□□□□ -0.5
SKA2-204ENST00000578519 WNT8AQ9H1J5 351 aa11.92□□□□□ -0.5
SKA2-204ENST00000578519 MRPL47Q9HD33 250 aaKnown RBP11.92□□□□□ -0.5
SKA2-204ENST00000578519 PTPRHQ9HD43 1115 aa11.92□□□□□ -0.5
SKA2-204ENST00000578519 NOCTQ9UK39 431 aaKnown RBP11.92□□□□□ -0.5
SKA2-204ENST00000578519 A0A087WZ62 844 aa11.91□□□□□ -0.5
SKA2-204ENST00000578519 GOLGA6L10A0A0M3HER8 536 aa11.91□□□□□ -0.5
SKA2-204ENST00000578519 PGRMC1O00264 195 aaKnown RBP11.91□□□□□ -0.5
SKA2-204ENST00000578519 TNPO2O14787 897 aaKnown RBP11.91□□□□□ -0.5
SKA2-204ENST00000578519 CEP104O60308 925 aa11.91□□□□□ -0.5
SKA2-204ENST00000578519 CYP1A2P05177 515 aa11.91□□□□□ -0.5
SKA2-204ENST00000578519 CETN2P41208 172 aa11.91□□□□□ -0.5
SKA2-204ENST00000578519 NSFP46459 744 aaKnown RBP11.91□□□□□ -0.5
SKA2-204ENST00000578519 TFAMQ00059 246 aaKnown RBP11.91□□□□□ -0.5
SKA2-204ENST00000578519 FMO1Q01740 532 aa11.91□□□□□ -0.5
SKA2-204ENST00000578519 TAF3Q5VWG9 929 aa11.91□□□□□ -0.5
SKA2-204ENST00000578519 MFSD14CQ5VZR4 134 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms