RNA–Protein interactions for RNA: ENST00000578469.1

SREBF1-218, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-218ENST00000578469 ATRIPQ8WXE1 791 aa18.28■□□□□ 0.52
SREBF1-218ENST00000578469 LENG1Q96BZ8 264 aaPredicted RBP18.28■□□□□ 0.52
SREBF1-218ENST00000578469 IFT122Q9HBG6 1241 aa18.28■□□□□ 0.52
SREBF1-218ENST00000578469 PDE11AQ9HCR9 933 aa18.28■□□□□ 0.52
SREBF1-218ENST00000578469 TTLL13PA6NNM8 815 aa18.27■□□□□ 0.52
SREBF1-218ENST00000578469 ZNF263O14978 683 aa18.27■□□□□ 0.52
SREBF1-218ENST00000578469 URI1O94763 535 aaPredicted RBP18.27■□□□□ 0.52
SREBF1-218ENST00000578469 MYCNP04198 464 aaPredicted RBP18.27■□□□□ 0.52
SREBF1-218ENST00000578469 PTK2Q05397 1052 aa18.27■□□□□ 0.52
SREBF1-218ENST00000578469 BIRC3Q13489 604 aa18.27■□□□□ 0.52
SREBF1-218ENST00000578469 KYAT1Q16773 422 aa18.27■□□□□ 0.52
SREBF1-218ENST00000578469 ZACNQ401N2 412 aa18.27■□□□□ 0.52
SREBF1-218ENST00000578469 C15orf39Q6ZRI6 1047 aa18.27■□□□□ 0.52
SREBF1-218ENST00000578469 APBB1IPQ7Z5R6 666 aaPredicted RBP18.27■□□□□ 0.52
SREBF1-218ENST00000578469 ARHGEF19Q8IW93 802 aa18.27■□□□□ 0.52
SREBF1-218ENST00000578469 PPM1KQ8N3J5 372 aa18.27■□□□□ 0.52
SREBF1-218ENST00000578469 TAS1R2Q8TE23 839 aa18.27■□□□□ 0.52
SREBF1-218ENST00000578469 SEMA4DQ92854 862 aa18.27■□□□□ 0.52
SREBF1-218ENST00000578469 PTPRHQ9HD43 1115 aa18.27■□□□□ 0.52
SREBF1-218ENST00000578469 ADAMTS1Q9UHI8 967 aa18.27■□□□□ 0.52
SREBF1-218ENST00000578469 CNTNAP2Q9UHC6 1331 aa18.26■□□□□ 0.51
SREBF1-218ENST00000578469 CTAGE9A4FU28 777 aa18.26■□□□□ 0.51
SREBF1-218ENST00000578469 ABLIM1O14639 778 aa18.26■□□□□ 0.51
SREBF1-218ENST00000578469 PJA2O43164 708 aa18.26■□□□□ 0.51
SREBF1-218ENST00000578469 SEPT4O43236 478 aa18.26■□□□□ 0.51
SREBF1-218ENST00000578469 PHACTR2O75167 634 aa18.26■□□□□ 0.51
SREBF1-218ENST00000578469 ERLIN2O94905 339 aa18.26■□□□□ 0.51
SREBF1-218ENST00000578469 C4BPAP04003 597 aaKnown RBP18.26■□□□□ 0.51
SREBF1-218ENST00000578469 MCF2P10911 925 aa18.26■□□□□ 0.51
SREBF1-218ENST00000578469 CYP2C9P11712 490 aa18.26■□□□□ 0.51
SREBF1-218ENST00000578469 PIK3CAP42336 1068 aa18.26■□□□□ 0.51
SREBF1-218ENST00000578469 GJA9P57773 515 aa18.26■□□□□ 0.51
SREBF1-218ENST00000578469 BEX3Q00994 111 aa18.26■□□□□ 0.51
SREBF1-218ENST00000578469 POU5F1Q01860 360 aaKnown RBP18.26■□□□□ 0.51
SREBF1-218ENST00000578469 NCBP1Q09161 790 aaKnown RBP18.26■□□□□ 0.51
SREBF1-218ENST00000578469 BMS1Q14692 1282 aaKnown RBP18.26■□□□□ 0.51
SREBF1-218ENST00000578469 ZBTB41Q5SVQ8 909 aa18.26■□□□□ 0.51
SREBF1-218ENST00000578469 SLC39A5Q6ZMH5 540 aa18.26■□□□□ 0.51
SREBF1-218ENST00000578469 ZNF571Q7Z3V5 609 aaPredicted RBP18.26■□□□□ 0.51
SREBF1-218ENST00000578469 WDR49Q8IV35 697 aa18.26■□□□□ 0.51
SREBF1-218ENST00000578469 ZNF710Q8N1W2 664 aa18.26■□□□□ 0.51
SREBF1-218ENST00000578469 SLC35F6Q8N357 371 aa18.26■□□□□ 0.51
SREBF1-218ENST00000578469 TRPV1Q8NER1 839 aa18.26■□□□□ 0.51
SREBF1-218ENST00000578469 MAFAQ8NHW3 353 aaPredicted RBP18.26■□□□□ 0.51
SREBF1-218ENST00000578469 ZNF516Q92618 1163 aa18.26■□□□□ 0.51
SREBF1-218ENST00000578469 SECISBP2LQ93073 1101 aaKnown RBP18.26■□□□□ 0.51
SREBF1-218ENST00000578469 WDR24Q96S15 920 aa18.26■□□□□ 0.51
SREBF1-218ENST00000578469 GCOM2Q9BZD3 368 aaPredicted RBP18.26■□□□□ 0.51
SREBF1-218ENST00000578469 IRX2Q9BZI1 471 aaPredicted RBP18.26■□□□□ 0.51
SREBF1-218ENST00000578469 MINDY3Q9H8M7 445 aa18.26■□□□□ 0.51
SREBF1-218ENST00000578469 C1orf112Q9NSG2 853 aa18.26■□□□□ 0.51
SREBF1-218ENST00000578469 CPSF3Q9UKF6 684 aaKnown RBP18.26■□□□□ 0.51
SREBF1-218ENST00000578469 A0A087X0T9 212 aa18.25■□□□□ 0.51
SREBF1-218ENST00000578469 UQCRHLA0A096LP55 91 aa18.25■□□□□ 0.51
SREBF1-218ENST00000578469 C17orf102A2RUQ5 167 aa18.25■□□□□ 0.51
SREBF1-218ENST00000578469 MBLAC1A4D2B0 266 aaPredicted RBP18.25■□□□□ 0.51
SREBF1-218ENST00000578469 FOXN3O00409 490 aaPredicted RBP18.25■□□□□ 0.51
SREBF1-218ENST00000578469 B4GALT5O43286 388 aa18.25■□□□□ 0.51
SREBF1-218ENST00000578469 IL18RAPO95256 599 aa18.25■□□□□ 0.51
SREBF1-218ENST00000578469 HLA-DRAP01903 254 aa18.25■□□□□ 0.51
SREBF1-218ENST00000578469 UQCRHP07919 91 aa18.25■□□□□ 0.51
SREBF1-218ENST00000578469 C6orf222P0C671 652 aaPredicted RBP18.25■□□□□ 0.51
SREBF1-218ENST00000578469 FAM228BP0C875 321 aa18.25■□□□□ 0.51
SREBF1-218ENST00000578469 RARBP10826 455 aa18.25■□□□□ 0.51
SREBF1-218ENST00000578469 TUBB2AQ13885 445 aa18.25■□□□□ 0.51
SREBF1-218ENST00000578469 THNSL1Q8IYQ7 743 aa18.25■□□□□ 0.51
SREBF1-218ENST00000578469 C7orf31Q8N865 590 aa18.25■□□□□ 0.51
SREBF1-218ENST00000578469 PPP1R16BQ96T49 567 aa18.25■□□□□ 0.51
SREBF1-218ENST00000578469 CDX2Q99626 313 aaPredicted RBP18.25■□□□□ 0.51
SREBF1-218ENST00000578469 NAPGQ99747 312 aaPredicted RBP18.25■□□□□ 0.51
SREBF1-218ENST00000578469 MTG1Q9BT17 334 aaPredicted RBP18.25■□□□□ 0.51
SREBF1-218ENST00000578469 TUBB2BQ9BVA1 445 aa18.25■□□□□ 0.51
SREBF1-218ENST00000578469 GPR88Q9GZN0 384 aa18.25■□□□□ 0.51
SREBF1-218ENST00000578469 LACRTQ9GZZ8 138 aa18.25■□□□□ 0.51
SREBF1-218ENST00000578469 FAM49AQ9H0Q0 323 aaPredicted RBP18.25■□□□□ 0.51
SREBF1-218ENST00000578469 CDT1Q9H211 546 aa18.25■□□□□ 0.51
SREBF1-218ENST00000578469 RPF1Q9H9Y2 349 aaKnown RBP18.25■□□□□ 0.51
SREBF1-218ENST00000578469 TRIM10Q9UDY6 481 aa18.25■□□□□ 0.51
SREBF1-218ENST00000578469 EVPLQ92817 2033 aa18.25■□□□□ 0.51
SREBF1-218ENST00000578469 RCCD1A6NED2 376 aa18.24■□□□□ 0.51
SREBF1-218ENST00000578469 FAM189A1O60320 539 aa18.24■□□□□ 0.51
SREBF1-218ENST00000578469 LRRN2O75325 713 aa18.24■□□□□ 0.51
SREBF1-218ENST00000578469 TACC1O75410 805 aa18.24■□□□□ 0.51
SREBF1-218ENST00000578469 TNFAIP3P21580 790 aa18.24■□□□□ 0.51
SREBF1-218ENST00000578469 TNFSF9P41273 254 aa18.24■□□□□ 0.51
SREBF1-218ENST00000578469 SMAD3P84022 425 aaKnown RBP18.24■□□□□ 0.51
SREBF1-218ENST00000578469 PURAQ00577 322 aaKnown RBP18.24■□□□□ 0.51
SREBF1-218ENST00000578469 GCNT1Q02742 428 aa18.24■□□□□ 0.51
SREBF1-218ENST00000578469 PCBP1Q15365 356 aaKnown RBP eCLIP18.24■□□□□ 0.51
SREBF1-218ENST00000578469 SHHQ15465 462 aa18.24■□□□□ 0.51
SREBF1-218ENST00000578469 NAB2Q15742 525 aa18.24■□□□□ 0.51
SREBF1-218ENST00000578469 AMHR2Q16671 573 aa18.24■□□□□ 0.51
SREBF1-218ENST00000578469 SEZ6Q53EL9 994 aa18.24■□□□□ 0.51
SREBF1-218ENST00000578469 EEF1DP3Q658K8 133 aa18.24■□□□□ 0.51
SREBF1-218ENST00000578469 LMBRD2Q68DH5 695 aaPredicted RBP18.24■□□□□ 0.51
SREBF1-218ENST00000578469 HELQQ8TDG4 1101 aa18.24■□□□□ 0.51
SREBF1-218ENST00000578469 FAM212AQ96EL1 285 aa18.24■□□□□ 0.51
SREBF1-218ENST00000578469 ADPGKQ9BRR6 497 aa18.24■□□□□ 0.51
SREBF1-218ENST00000578469 UPF3AQ9H1J1 476 aaKnown RBP18.24■□□□□ 0.51
SREBF1-218ENST00000578469 L2HGDHQ9H9P8 463 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms