RNA–Protein interactions for RNA: ENST00000578415.1

TSEN54-205, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 994 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-205ENST00000578415 NT5DC1Q5TFE4 455 aa23.11■■□□□ 1.29
TSEN54-205ENST00000578415 POTEHQ6S545 545 aa23.11■■□□□ 1.29
TSEN54-205ENST00000578415 RTL10Q7L3V2 364 aa23.11■■□□□ 1.29
TSEN54-205ENST00000578415 C3orf58Q8NDZ4 430 aa23.11■■□□□ 1.29
TSEN54-205ENST00000578415 DDX27Q96GQ7 796 aaKnown RBP23.11■■□□□ 1.29
TSEN54-205ENST00000578415 BCO2Q9BYV7 579 aa23.11■■□□□ 1.29
TSEN54-205ENST00000578415 OSBPL6Q9BZF3 934 aa23.11■■□□□ 1.29
TSEN54-205ENST00000578415 GOLGA2P5Q9HBQ8 144 aa23.11■■□□□ 1.29
TSEN54-205ENST00000578415 POLD4Q9HCU8 107 aa23.11■■□□□ 1.29
TSEN54-205ENST00000578415 LTB4R2Q9NPC1 389 aa23.11■■□□□ 1.29
TSEN54-205ENST00000578415 SPATA6Q9NWH7 488 aaPredicted RBP23.11■■□□□ 1.29
TSEN54-205ENST00000578415 BACE2Q9Y5Z0 518 aa23.11■■□□□ 1.29
TSEN54-205ENST00000578415 FANCMQ8IYD8 2048 aa23.11■■□□□ 1.29
TSEN54-205ENST00000578415 FRYLO94915 3013 aa23.1■■□□□ 1.29
TSEN54-205ENST00000578415 NOTCH4Q99466 2003 aa23.1■■□□□ 1.29
TSEN54-205ENST00000578415 MED19A0JLT2 244 aaPredicted RBP23.1■■□□□ 1.29
TSEN54-205ENST00000578415 FAM170BA6NMN3 283 aa23.1■■□□□ 1.29
TSEN54-205ENST00000578415 CD72P21854 359 aa23.1■■□□□ 1.29
TSEN54-205ENST00000578415 PPP2R5AQ15172 486 aa23.1■■□□□ 1.29
TSEN54-205ENST00000578415 UPP1Q16831 310 aa23.1■■□□□ 1.29
TSEN54-205ENST00000578415 SLC5A9Q2M3M2 681 aa23.1■■□□□ 1.29
TSEN54-205ENST00000578415 ZNF528Q3MIS6 628 aa23.1■■□□□ 1.29
TSEN54-205ENST00000578415 CEP250Q9BV73 2442 aa23.1■■□□□ 1.29
TSEN54-205ENST00000578415 I3L4J1 428 aa23.09■■□□□ 1.29
TSEN54-205ENST00000578415 LAMTOR5O43504 91 aa23.09■■□□□ 1.29
TSEN54-205ENST00000578415 KINO60870 393 aaKnown RBP23.09■■□□□ 1.29
TSEN54-205ENST00000578415 BRCC3P46736 316 aa23.09■■□□□ 1.29
TSEN54-205ENST00000578415 GUCY1B3Q02153 619 aa23.09■■□□□ 1.29
TSEN54-205ENST00000578415 ECM1Q16610 540 aa23.09■■□□□ 1.29
TSEN54-205ENST00000578415 ATF7IP2Q5U623 682 aa23.09■■□□□ 1.29
TSEN54-205ENST00000578415 DGLUCYQ7Z3D6 616 aa23.09■■□□□ 1.29
TSEN54-205ENST00000578415 ERMNQ8TAM6 284 aa23.09■■□□□ 1.29
TSEN54-205ENST00000578415 FBXO4Q9UKT5 387 aa23.09■■□□□ 1.29
TSEN54-205ENST00000578415 MRPS23Q9Y3D9 190 aaKnown RBP23.09■■□□□ 1.29
TSEN54-205ENST00000578415 RHOP08100 348 aa23.08■■□□□ 1.29
TSEN54-205ENST00000578415 OR52Z1P0C646 297 aa23.08■■□□□ 1.29
TSEN54-205ENST00000578415 EFNA5P52803 228 aa23.08■■□□□ 1.29
TSEN54-205ENST00000578415 SOX4Q06945 474 aaPredicted RBP23.08■■□□□ 1.29
TSEN54-205ENST00000578415 ZNF174Q15697 407 aa23.08■■□□□ 1.29
TSEN54-205ENST00000578415 ANKS3Q6ZW76 656 aa23.08■■□□□ 1.29
TSEN54-205ENST00000578415 CEP120Q8N960 986 aa23.08■■□□□ 1.29
TSEN54-205ENST00000578415 UROC1Q96N76 676 aa23.08■■□□□ 1.29
TSEN54-205ENST00000578415 PLA2G2FQ9BZM2 168 aa23.08■■□□□ 1.29
TSEN54-205ENST00000578415 SMIM28A0A1B0GU29 152 aa23.07■■□□□ 1.28
TSEN54-205ENST00000578415 ECI2O75521 394 aa23.07■■□□□ 1.28
TSEN54-205ENST00000578415 TARSP26639 723 aaKnown RBP23.07■■□□□ 1.28
TSEN54-205ENST00000578415 TPRG1Q6ZUI0 275 aa23.07■■□□□ 1.28
TSEN54-205ENST00000578415 MCRS1Q96EZ8 462 aa23.07■■□□□ 1.28
TSEN54-205ENST00000578415 IFT74Q96LB3 600 aa23.07■■□□□ 1.28
TSEN54-205ENST00000578415 AVENQ9NQS1 362 aaPredicted RBP23.07■■□□□ 1.28
TSEN54-205ENST00000578415 GDE1Q9NZC3 331 aa23.07■■□□□ 1.28
TSEN54-205ENST00000578415 TNFSF13BQ9Y275 285 aa23.07■■□□□ 1.28
TSEN54-205ENST00000578415 ARHGEF37A1IGU5 675 aa23.06■■□□□ 1.28
TSEN54-205ENST00000578415 SHISA7A6NL88 538 aa23.06■■□□□ 1.28
TSEN54-205ENST00000578415 SPTLC1O15269 473 aa23.06■■□□□ 1.28
TSEN54-205ENST00000578415 TRAPPC3O43617 180 aa23.06■■□□□ 1.28
TSEN54-205ENST00000578415 CEBPBP17676 345 aa23.06■■□□□ 1.28
TSEN54-205ENST00000578415 MUTP22033 750 aa23.06■■□□□ 1.28
TSEN54-205ENST00000578415 MAGEA9P43362 315 aa23.06■■□□□ 1.28
TSEN54-205ENST00000578415 ROR1Q01973 937 aa23.06■■□□□ 1.28
TSEN54-205ENST00000578415 CSTF1Q05048 431 aaKnown RBP23.06■■□□□ 1.28
TSEN54-205ENST00000578415 ORC2Q13416 577 aaPredicted RBP23.06■■□□□ 1.28
TSEN54-205ENST00000578415 PUM1Q14671 1186 aaKnown RBP eCLIP23.06■■□□□ 1.28
TSEN54-205ENST00000578415 XKR4Q5GH76 650 aa23.06■■□□□ 1.28
TSEN54-205ENST00000578415 SLC8B1Q6J4K2 584 aa23.06■■□□□ 1.28
TSEN54-205ENST00000578415 ALKAL1Q6UXT8 129 aa23.06■■□□□ 1.28
TSEN54-205ENST00000578415 KIFAP3Q92845 792 aa23.06■■□□□ 1.28
TSEN54-205ENST00000578415 CLDN23Q96B33 292 aa23.06■■□□□ 1.28
TSEN54-205ENST00000578415 BHMT2Q9H2M3 363 aa23.06■■□□□ 1.28
TSEN54-205ENST00000578415 DLL3Q9NYJ7 618 aa23.06■■□□□ 1.28
TSEN54-205ENST00000578415 DAXXQ9UER7 740 aaPredicted RBP23.06■■□□□ 1.28
TSEN54-205ENST00000578415 MIA3Q5JRA6 1907 aa23.06■■□□□ 1.28
TSEN54-205ENST00000578415 NCOR2Q9Y618 2525 aa23.05■■□□□ 1.28
TSEN54-205ENST00000578415 ABLIM3O94929 683 aa23.05■■□□□ 1.28
TSEN54-205ENST00000578415 GRM5P41594 1212 aa23.05■■□□□ 1.28
TSEN54-205ENST00000578415 SAFBQ15424 915 aaKnown RBP eCLIP23.05■■□□□ 1.28
TSEN54-205ENST00000578415 ZBTB41Q5SVQ8 909 aa23.05■■□□□ 1.28
TSEN54-205ENST00000578415 HAUS3Q68CZ6 603 aa23.05■■□□□ 1.28
TSEN54-205ENST00000578415 TANGO2Q6ICL3 276 aa23.05■■□□□ 1.28
TSEN54-205ENST00000578415 ZNF461Q8TAF7 563 aa23.05■■□□□ 1.28
TSEN54-205ENST00000578415 CDT1Q9H211 546 aa23.05■■□□□ 1.28
TSEN54-205ENST00000578415 PCDHGA2Q9Y5H1 932 aa23.05■■□□□ 1.28
TSEN54-205ENST00000578415 PATJQ8NI35 1801 aa23.04■■□□□ 1.28
TSEN54-205ENST00000578415 WDR27A2RRH5 827 aa23.04■■□□□ 1.28
TSEN54-205ENST00000578415 TBC1D4O60343 1298 aa23.04■■□□□ 1.28
TSEN54-205ENST00000578415 FCARP24071 287 aa23.04■■□□□ 1.28
TSEN54-205ENST00000578415 CCT6AP40227 531 aaKnown RBP23.04■■□□□ 1.28
TSEN54-205ENST00000578415 NEK4P51957 841 aa23.04■■□□□ 1.28
TSEN54-205ENST00000578415 FZD5Q13467 585 aa23.04■■□□□ 1.28
TSEN54-205ENST00000578415 VARS2Q5ST30 1063 aaKnown RBP23.04■■□□□ 1.28
TSEN54-205ENST00000578415 APBB1IPQ7Z5R6 666 aaPredicted RBP23.04■■□□□ 1.28
TSEN54-205ENST00000578415 ZBTB44Q8NCP5 570 aa23.04■■□□□ 1.28
TSEN54-205ENST00000578415 NELL1Q92832 810 aa23.04■■□□□ 1.28
TSEN54-205ENST00000578415 ZMAT2Q96NC0 199 aaKnown RBP23.04■■□□□ 1.28
TSEN54-205ENST00000578415 ACO2Q99798 780 aaKnown RBP23.04■■□□□ 1.28
TSEN54-205ENST00000578415 PTPRHQ9HD43 1115 aa23.04■■□□□ 1.28
TSEN54-205ENST00000578415 HEBP1Q9NRV9 189 aa23.04■■□□□ 1.28
TSEN54-205ENST00000578415 K7ERI5 159 aa23.03■■□□□ 1.28
TSEN54-205ENST00000578415 NRG2O14511 850 aaPredicted RBP23.03■■□□□ 1.28
TSEN54-205ENST00000578415 PTPN2P17706 415 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms