RNA–Protein interactions for RNA: ENST00000578234.1

SMARCD2-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 2

Gene SMARCD2, Length 595 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-207ENST00000578234 TRAPPC3O43617 180 aa13.8□□□□□ -0.2
SMARCD2-207ENST00000578234 XYLBO75191 536 aa13.8□□□□□ -0.2
SMARCD2-207ENST00000578234 POU2F2P09086 479 aa13.8□□□□□ -0.2
SMARCD2-207ENST00000578234 OR1D2P34982 312 aa13.8□□□□□ -0.2
SMARCD2-207ENST00000578234 ID4P47928 161 aa13.8□□□□□ -0.2
SMARCD2-207ENST00000578234 PTGDRQ13258 359 aa13.8□□□□□ -0.2
SMARCD2-207ENST00000578234 UPP1Q16831 310 aa13.8□□□□□ -0.2
SMARCD2-207ENST00000578234 KIFC3Q9BVG8 833 aa13.8□□□□□ -0.2
SMARCD2-207ENST00000578234 ARHGEF3Q9NR81 526 aa13.8□□□□□ -0.2
SMARCD2-207ENST00000578234 DDX19AQ9NUU7 478 aaKnown RBP13.8□□□□□ -0.2
SMARCD2-207ENST00000578234 MTRRQ9UBK8 725 aa13.8□□□□□ -0.2
SMARCD2-207ENST00000578234 SIT1Q9Y3P8 196 aa13.8□□□□□ -0.2
SMARCD2-207ENST00000578234 LAD1O00515 517 aa13.79□□□□□ -0.2
SMARCD2-207ENST00000578234 GRM5P41594 1212 aa13.79□□□□□ -0.2
SMARCD2-207ENST00000578234 NPTX2P47972 431 aa13.79□□□□□ -0.2
SMARCD2-207ENST00000578234 CLCNKBP51801 687 aa13.79□□□□□ -0.2
SMARCD2-207ENST00000578234 NTHL1P78549 312 aa13.79□□□□□ -0.2
SMARCD2-207ENST00000578234 XKR4Q5GH76 650 aa13.79□□□□□ -0.2
SMARCD2-207ENST00000578234 GLRA4Q5JXX5 417 aa13.79□□□□□ -0.2
SMARCD2-207ENST00000578234 AXDND1Q5T1B0 1012 aaPredicted RBP13.79□□□□□ -0.2
SMARCD2-207ENST00000578234 ALKAL1Q6UXT8 129 aa13.79□□□□□ -0.2
SMARCD2-207ENST00000578234 ANKS3Q6ZW76 656 aa13.79□□□□□ -0.2
SMARCD2-207ENST00000578234 SLC7A14Q8TBB6 771 aa13.79□□□□□ -0.2
SMARCD2-207ENST00000578234 FGF13Q92913 245 aa13.79□□□□□ -0.2
SMARCD2-207ENST00000578234 FGF14Q92915 247 aa13.79□□□□□ -0.2
SMARCD2-207ENST00000578234 ACO2Q99798 780 aaKnown RBP13.79□□□□□ -0.2
SMARCD2-207ENST00000578234 SEMA4AQ9H3S1 761 aa13.79□□□□□ -0.2
SMARCD2-207ENST00000578234 TMEM134Q9H6X4 195 aa13.79□□□□□ -0.2
SMARCD2-207ENST00000578234 TOPORSQ9NS56 1045 aaPredicted RBP13.79□□□□□ -0.2
SMARCD2-207ENST00000578234 DNM3Q9UQ16 869 aa13.79□□□□□ -0.2
SMARCD2-207ENST00000578234 KIF3AQ9Y496 699 aa13.79□□□□□ -0.2
SMARCD2-207ENST00000578234 BACE2Q9Y5Z0 518 aa13.79□□□□□ -0.2
SMARCD2-207ENST00000578234 PHLPP2Q6ZVD8 1323 aa13.79□□□□□ -0.2
SMARCD2-207ENST00000578234 WDR87Q6ZQQ6 2873 aa13.79□□□□□ -0.2
SMARCD2-207ENST00000578234 MYH15Q9Y2K3 1946 aa13.78□□□□□ -0.2
SMARCD2-207ENST00000578234 SMIM28A0A1B0GU29 152 aa13.78□□□□□ -0.2
SMARCD2-207ENST00000578234 H3BQV1 296 aa13.78□□□□□ -0.2
SMARCD2-207ENST00000578234 IGFBP6P24592 240 aaPredicted RBP13.78□□□□□ -0.2
SMARCD2-207ENST00000578234 TOB1P50616 345 aaPredicted RBP13.78□□□□□ -0.2
SMARCD2-207ENST00000578234 YARSP54577 528 aaKnown RBP13.78□□□□□ -0.2
SMARCD2-207ENST00000578234 PEX3P56589 373 aa13.78□□□□□ -0.2
SMARCD2-207ENST00000578234 STARD6P59095 220 aa13.78□□□□□ -0.2
SMARCD2-207ENST00000578234 NBR1Q14596 966 aa13.78□□□□□ -0.2
SMARCD2-207ENST00000578234 PARM1Q6UWI2 310 aa13.78□□□□□ -0.2
SMARCD2-207ENST00000578234 CD300LGQ6UXG3 332 aa13.78□□□□□ -0.2
SMARCD2-207ENST00000578234 MTSS1LQ765P7 747 aa13.78□□□□□ -0.2
SMARCD2-207ENST00000578234 KIAA2013Q8IYS2 634 aa13.78□□□□□ -0.2
SMARCD2-207ENST00000578234 DAW1Q8N136 415 aa13.78□□□□□ -0.2
SMARCD2-207ENST00000578234 SNX29Q8TEQ0 813 aa13.78□□□□□ -0.2
SMARCD2-207ENST00000578234 DDX27Q96GQ7 796 aaKnown RBP13.78□□□□□ -0.2
SMARCD2-207ENST00000578234 SHDQ96IW2 340 aa13.78□□□□□ -0.2
SMARCD2-207ENST00000578234 RPP25Q9BUL9 199 aaKnown RBP13.78□□□□□ -0.2
SMARCD2-207ENST00000578234 CCDC94Q9BW85 323 aaPredicted RBP13.78□□□□□ -0.2
SMARCD2-207ENST00000578234 FOXQ1Q9C009 403 aa13.78□□□□□ -0.2
SMARCD2-207ENST00000578234 C17orf75Q9HAS0 396 aa13.78□□□□□ -0.2
SMARCD2-207ENST00000578234 PTPRHQ9HD43 1115 aa13.78□□□□□ -0.2
SMARCD2-207ENST00000578234 DLGAP2Q9P1A6 1054 aa13.78□□□□□ -0.2
SMARCD2-207ENST00000578234 KCNH3Q9ULD8 1083 aa13.78□□□□□ -0.2
SMARCD2-207ENST00000578234 RBM19Q9Y4C8 960 aaKnown RBP13.78□□□□□ -0.2
SMARCD2-207ENST00000578234 PCDHB6Q9Y5E3 794 aa13.78□□□□□ -0.2
SMARCD2-207ENST00000578234 CDY1Q9Y6F8 540 aa13.78□□□□□ -0.2
SMARCD2-207ENST00000578234 MIA3Q5JRA6 1907 aa13.78□□□□□ -0.2
SMARCD2-207ENST00000578234 CCDC169A6NNP5 214 aa13.77□□□□□ -0.21
SMARCD2-207ENST00000578234 E9PMD0 336 aa13.77□□□□□ -0.21
SMARCD2-207ENST00000578234 LMNAP02545 664 aaKnown RBP13.77□□□□□ -0.21
SMARCD2-207ENST00000578234 HSP90AA1P07900 732 aaKnown RBP13.77□□□□□ -0.21
SMARCD2-207ENST00000578234 TKTP29401 623 aaKnown RBP13.77□□□□□ -0.21
SMARCD2-207ENST00000578234 PRPHP41219 470 aa13.77□□□□□ -0.21
SMARCD2-207ENST00000578234 ARPP19P56211 112 aa13.77□□□□□ -0.21
SMARCD2-207ENST00000578234 GPC5P78333 572 aa13.77□□□□□ -0.21
SMARCD2-207ENST00000578234 DMP1Q13316 513 aaPredicted RBP13.77□□□□□ -0.21
SMARCD2-207ENST00000578234 SNW1Q13573 536 aaKnown RBP13.77□□□□□ -0.21
SMARCD2-207ENST00000578234 UBXN2BQ14CS0 331 aa13.77□□□□□ -0.21
SMARCD2-207ENST00000578234 ZNF568Q3ZCX4 644 aa13.77□□□□□ -0.21
SMARCD2-207ENST00000578234 KRT79Q5XKE5 535 aa13.77□□□□□ -0.21
SMARCD2-207ENST00000578234 LARP1BQ659C4 914 aaKnown RBP13.77□□□□□ -0.21
SMARCD2-207ENST00000578234 MCTP1Q6DN14 999 aa13.77□□□□□ -0.21
SMARCD2-207ENST00000578234 RSPO2Q6UXX9 243 aaPredicted RBP13.77□□□□□ -0.21
SMARCD2-207ENST00000578234 CEP120Q8N960 986 aa13.77□□□□□ -0.21
SMARCD2-207ENST00000578234 C3orf58Q8NDZ4 430 aa13.77□□□□□ -0.21
SMARCD2-207ENST00000578234 ITFG1Q8TB96 612 aa13.77□□□□□ -0.21
SMARCD2-207ENST00000578234 DRC1Q96MC2 740 aa13.77□□□□□ -0.21
SMARCD2-207ENST00000578234 NTPCRQ9BSD7 190 aaKnown RBP13.77□□□□□ -0.21
SMARCD2-207ENST00000578234 MRPL4Q9BYD3 311 aaKnown RBP13.77□□□□□ -0.21
SMARCD2-207ENST00000578234 CDT1Q9H211 546 aa13.77□□□□□ -0.21
SMARCD2-207ENST00000578234 GOLGA2P5Q9HBQ8 144 aa13.77□□□□□ -0.21
SMARCD2-207ENST00000578234 SLC38A7Q9NVC3 462 aa13.77□□□□□ -0.21
SMARCD2-207ENST00000578234 SPATA6Q9NWH7 488 aaPredicted RBP13.77□□□□□ -0.21
SMARCD2-207ENST00000578234 CACNA1IQ9P0X4 2223 aa13.77□□□□□ -0.21
SMARCD2-207ENST00000578234 ARHGAP28Q9P2N2 729 aa13.77□□□□□ -0.21
SMARCD2-207ENST00000578234 DNMT3BQ9UBC3 853 aaKnown RBP13.77□□□□□ -0.21
SMARCD2-207ENST00000578234 NOTCH4Q99466 2003 aa13.76□□□□□ -0.21
SMARCD2-207ENST00000578234 KCNE1P15382 129 aa13.76□□□□□ -0.21
SMARCD2-207ENST00000578234 PROZP22891 400 aa13.76□□□□□ -0.21
SMARCD2-207ENST00000578234 FOXK2Q01167 660 aa13.76□□□□□ -0.21
SMARCD2-207ENST00000578234 SOX4Q06945 474 aaPredicted RBP13.76□□□□□ -0.21
SMARCD2-207ENST00000578234 MAPK7Q13164 816 aa13.76□□□□□ -0.21
SMARCD2-207ENST00000578234 PABPC1LQ4VXU2 614 aaKnown RBP13.76□□□□□ -0.21
SMARCD2-207ENST00000578234 SLC8B1Q6J4K2 584 aa13.76□□□□□ -0.21
SMARCD2-207ENST00000578234 RINT1Q6NUQ1 792 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms