RNA–Protein interactions for RNA: ENST00000577699.6

AP003028.1-201, humanhuman

TSL 5 BASIC

Gene AP003028.1, Length 1,033 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003028.1-201ENST00000577699 CLCNKBP51801 687 aa12.42□□□□□ -0.42
AP003028.1-201ENST00000577699 YARSP54577 528 aaKnown RBP12.42□□□□□ -0.42
AP003028.1-201ENST00000577699 STARD6P59095 220 aa12.42□□□□□ -0.42
AP003028.1-201ENST00000577699 UPP1Q16831 310 aa12.42□□□□□ -0.42
AP003028.1-201ENST00000577699 PABPC1LQ4VXU2 614 aaKnown RBP12.42□□□□□ -0.42
AP003028.1-201ENST00000577699 NT5DC1Q5TFE4 455 aa12.42□□□□□ -0.42
AP003028.1-201ENST00000577699 ANKS3Q6ZW76 656 aa12.42□□□□□ -0.42
AP003028.1-201ENST00000577699 CCDC83Q8IWF9 413 aa12.42□□□□□ -0.42
AP003028.1-201ENST00000577699 ST13P5Q8NFI4 369 aaPredicted RBP12.42□□□□□ -0.42
AP003028.1-201ENST00000577699 FBXO18Q8NFZ0 1043 aa12.42□□□□□ -0.42
AP003028.1-201ENST00000577699 KCNG4Q8TDN1 519 aa12.42□□□□□ -0.42
AP003028.1-201ENST00000577699 RPP25Q9BUL9 199 aaKnown RBP12.42□□□□□ -0.42
AP003028.1-201ENST00000577699 RAB34Q9BZG1 259 aa12.42□□□□□ -0.42
AP003028.1-201ENST00000577699 FOXQ1Q9C009 403 aa12.42□□□□□ -0.42
AP003028.1-201ENST00000577699 LRWD1Q9UFC0 647 aa12.42□□□□□ -0.42
AP003028.1-201ENST00000577699 NOL7Q9UMY1 257 aaKnown RBP12.42□□□□□ -0.42
AP003028.1-201ENST00000577699 KIAA1024Q9UPX6 916 aa12.42□□□□□ -0.42
AP003028.1-201ENST00000577699 TNFSF13BQ9Y275 285 aa12.42□□□□□ -0.42
AP003028.1-201ENST00000577699 BACE2Q9Y5Z0 518 aa12.42□□□□□ -0.42
AP003028.1-201ENST00000577699 STK24Q9Y6E0 443 aa12.42□□□□□ -0.42
AP003028.1-201ENST00000577699 CDY1Q9Y6F8 540 aa12.42□□□□□ -0.42
AP003028.1-201ENST00000577699 TRIP11Q15643 1979 aa12.41□□□□□ -0.42
AP003028.1-201ENST00000577699 K7ERI5 159 aa12.41□□□□□ -0.42
AP003028.1-201ENST00000577699 TKTP29401 623 aaKnown RBP12.41□□□□□ -0.42
AP003028.1-201ENST00000577699 GRM5P41594 1212 aa12.41□□□□□ -0.42
AP003028.1-201ENST00000577699 GPC5P78333 572 aa12.41□□□□□ -0.42
AP003028.1-201ENST00000577699 HMGN5P82970 282 aaKnown RBP12.41□□□□□ -0.42
AP003028.1-201ENST00000577699 PFKPQ01813 784 aa12.41□□□□□ -0.42
AP003028.1-201ENST00000577699 DMP1Q13316 513 aaPredicted RBP12.41□□□□□ -0.42
AP003028.1-201ENST00000577699 ECM1Q16610 540 aa12.41□□□□□ -0.42
AP003028.1-201ENST00000577699 ZNF568Q3ZCX4 644 aa12.41□□□□□ -0.42
AP003028.1-201ENST00000577699 C1orf210Q8IVY1 113 aa12.41□□□□□ -0.42
AP003028.1-201ENST00000577699 NPAS3Q8IXF0 933 aa12.41□□□□□ -0.42
AP003028.1-201ENST00000577699 FANCMQ8IYD8 2048 aa12.41□□□□□ -0.42
AP003028.1-201ENST00000577699 C3orf58Q8NDZ4 430 aa12.41□□□□□ -0.42
AP003028.1-201ENST00000577699 ITFG1Q8TB96 612 aa12.41□□□□□ -0.42
AP003028.1-201ENST00000577699 SNX29Q8TEQ0 813 aa12.41□□□□□ -0.42
AP003028.1-201ENST00000577699 DDX27Q96GQ7 796 aaKnown RBP12.41□□□□□ -0.42
AP003028.1-201ENST00000577699 KXD1Q9BQD3 176 aa12.41□□□□□ -0.42
AP003028.1-201ENST00000577699 CCDC94Q9BW85 323 aaPredicted RBP12.41□□□□□ -0.42
AP003028.1-201ENST00000577699 DDX19AQ9NUU7 478 aaKnown RBP12.41□□□□□ -0.42
AP003028.1-201ENST00000577699 SLC38A7Q9NVC3 462 aa12.41□□□□□ -0.42
AP003028.1-201ENST00000577699 HCFC1R1Q9NWW0 138 aa12.41□□□□□ -0.42
AP003028.1-201ENST00000577699 PPP4R2Q9NY27 417 aa12.41□□□□□ -0.42
AP003028.1-201ENST00000577699 R4GN57 208 aa12.41□□□□□ -0.42
AP003028.1-201ENST00000577699 CEP250Q9BV73 2442 aa12.41□□□□□ -0.42
AP003028.1-201ENST00000577699 NOTCH4Q99466 2003 aa12.4□□□□□ -0.42
AP003028.1-201ENST00000577699 PATJQ8NI35 1801 aa12.4□□□□□ -0.42
AP003028.1-201ENST00000577699 SMIM28A0A1B0GU29 152 aa12.4□□□□□ -0.42
AP003028.1-201ENST00000577699 KANSL1LA0AUZ9 987 aa12.4□□□□□ -0.42
AP003028.1-201ENST00000577699 CCDC169A6NNP5 214 aa12.4□□□□□ -0.42
AP003028.1-201ENST00000577699 I3L4J1 428 aa12.4□□□□□ -0.42
AP003028.1-201ENST00000577699 SP9P0CG40 484 aa12.4□□□□□ -0.42
AP003028.1-201ENST00000577699 GLULP15104 373 aa12.4□□□□□ -0.42
AP003028.1-201ENST00000577699 IGFBP6P24592 240 aaPredicted RBP12.4□□□□□ -0.42
AP003028.1-201ENST00000577699 NPTX2P47972 431 aa12.4□□□□□ -0.42
AP003028.1-201ENST00000577699 PEX3P56589 373 aa12.4□□□□□ -0.42
AP003028.1-201ENST00000577699 PRKCQQ04759 706 aa12.4□□□□□ -0.42
AP003028.1-201ENST00000577699 SNW1Q13573 536 aaKnown RBP12.4□□□□□ -0.42
AP003028.1-201ENST00000577699 PDIA5Q14554 519 aa12.4□□□□□ -0.42
AP003028.1-201ENST00000577699 NBR1Q14596 966 aa12.4□□□□□ -0.42
AP003028.1-201ENST00000577699 MLF2Q15773 248 aaPredicted RBP12.4□□□□□ -0.42
AP003028.1-201ENST00000577699 XKR4Q5GH76 650 aa12.4□□□□□ -0.42
AP003028.1-201ENST00000577699 CD300LGQ6UXG3 332 aa12.4□□□□□ -0.42
AP003028.1-201ENST00000577699 RSPO2Q6UXX9 243 aaPredicted RBP12.4□□□□□ -0.42
AP003028.1-201ENST00000577699 ERMP1Q7Z2K6 904 aa12.4□□□□□ -0.42
AP003028.1-201ENST00000577699 C4orf32Q8N8J7 132 aa12.4□□□□□ -0.42
AP003028.1-201ENST00000577699 IGSF22Q8N9C0 903 aa12.4□□□□□ -0.42
AP003028.1-201ENST00000577699 FAM184AQ8NB25 1140 aa12.4□□□□□ -0.42
AP003028.1-201ENST00000577699 DRC1Q96MC2 740 aa12.4□□□□□ -0.42
AP003028.1-201ENST00000577699 ACO2Q99798 780 aaKnown RBP12.4□□□□□ -0.42
AP003028.1-201ENST00000577699 DDX23Q9BUQ8 820 aaKnown RBP12.4□□□□□ -0.42
AP003028.1-201ENST00000577699 MRPL4Q9BYD3 311 aaKnown RBP12.4□□□□□ -0.42
AP003028.1-201ENST00000577699 CDT1Q9H211 546 aa12.4□□□□□ -0.42
AP003028.1-201ENST00000577699 GOLGA2P5Q9HBQ8 144 aa12.4□□□□□ -0.42
AP003028.1-201ENST00000577699 POLD4Q9HCU8 107 aa12.4□□□□□ -0.42
AP003028.1-201ENST00000577699 GDE1Q9NZC3 331 aa12.4□□□□□ -0.42
AP003028.1-201ENST00000577699 DNMT3BQ9UBC3 853 aaKnown RBP12.4□□□□□ -0.42
AP003028.1-201ENST00000577699 MRPS23Q9Y3D9 190 aaKnown RBP12.4□□□□□ -0.42
AP003028.1-201ENST00000577699 COL4A3Q01955 1670 aa12.4□□□□□ -0.42
AP003028.1-201ENST00000577699 CACNA1IQ9P0X4 2223 aa12.39□□□□□ -0.43
AP003028.1-201ENST00000577699 CITO14578 2027 aa12.39□□□□□ -0.43
AP003028.1-201ENST00000577699 LAD1O00515 517 aa12.39□□□□□ -0.43
AP003028.1-201ENST00000577699 PODXLO00592 558 aa12.39□□□□□ -0.43
AP003028.1-201ENST00000577699 MCF2P10911 925 aa12.39□□□□□ -0.43
AP003028.1-201ENST00000577699 U2AF2P26368 475 aaKnown RBP eCLIP12.39□□□□□ -0.43
AP003028.1-201ENST00000577699 ID4P47928 161 aa12.39□□□□□ -0.43
AP003028.1-201ENST00000577699 ROR1Q01973 937 aa12.39□□□□□ -0.43
AP003028.1-201ENST00000577699 SOX4Q06945 474 aaPredicted RBP12.39□□□□□ -0.43
AP003028.1-201ENST00000577699 PTGDRQ13258 359 aa12.39□□□□□ -0.43
AP003028.1-201ENST00000577699 SLC8B1Q6J4K2 584 aa12.39□□□□□ -0.43
AP003028.1-201ENST00000577699 ALKAL1Q6UXT8 129 aa12.39□□□□□ -0.43
AP003028.1-201ENST00000577699 DAW1Q8N136 415 aa12.39□□□□□ -0.43
AP003028.1-201ENST00000577699 CEP120Q8N960 986 aa12.39□□□□□ -0.43
AP003028.1-201ENST00000577699 ZNF461Q8TAF7 563 aa12.39□□□□□ -0.43
AP003028.1-201ENST00000577699 ING5Q8WYH8 240 aa12.39□□□□□ -0.43
AP003028.1-201ENST00000577699 ZSCAN31Q96LW9 406 aaPredicted RBP12.39□□□□□ -0.43
AP003028.1-201ENST00000577699 BCO2Q9BYV7 579 aa12.39□□□□□ -0.43
AP003028.1-201ENST00000577699 OSBPL6Q9BZF3 934 aa12.39□□□□□ -0.43
AP003028.1-201ENST00000577699 TMEM134Q9H6X4 195 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms