RNA–Protein interactions for RNA: ENST00000577228.1

CDH8-202, Transcript of cadherin 8, humanhuman

TSL 4

Gene CDH8, Length 539 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-202ENST00000577228 DDX23Q9BUQ8 820 aaKnown RBP12.99□□□□□ -0.33
CDH8-202ENST00000577228 SPATA6Q9NWH7 488 aaPredicted RBP12.99□□□□□ -0.33
CDH8-202ENST00000577228 DNMT3BQ9UBC3 853 aaKnown RBP12.99□□□□□ -0.33
CDH8-202ENST00000577228 MRPS23Q9Y3D9 190 aaKnown RBP12.99□□□□□ -0.33
CDH8-202ENST00000577228 BACE2Q9Y5Z0 518 aa12.99□□□□□ -0.33
CDH8-202ENST00000577228 CACNA1AO00555 2505 aa12.98□□□□□ -0.33
CDH8-202ENST00000577228 OTOGLQ3ZCN5 2332 aa12.98□□□□□ -0.33
CDH8-202ENST00000577228 I3L4J1 428 aa12.98□□□□□ -0.33
CDH8-202ENST00000577228 LAMTOR5O43504 91 aa12.98□□□□□ -0.33
CDH8-202ENST00000577228 KINO60870 393 aaKnown RBP12.98□□□□□ -0.33
CDH8-202ENST00000577228 MUTP22033 750 aa12.98□□□□□ -0.33
CDH8-202ENST00000577228 IGFBP6P24592 240 aaPredicted RBP12.98□□□□□ -0.33
CDH8-202ENST00000577228 TKTP29401 623 aaKnown RBP12.98□□□□□ -0.33
CDH8-202ENST00000577228 CCT6AP40227 531 aaKnown RBP12.98□□□□□ -0.33
CDH8-202ENST00000577228 BRCC3P46736 316 aa12.98□□□□□ -0.33
CDH8-202ENST00000577228 NEK4P51957 841 aa12.98□□□□□ -0.33
CDH8-202ENST00000577228 ST3GAL1Q11201 340 aa12.98□□□□□ -0.33
CDH8-202ENST00000577228 UPP1Q16831 310 aa12.98□□□□□ -0.33
CDH8-202ENST00000577228 CD300LGQ6UXG3 332 aa12.98□□□□□ -0.33
CDH8-202ENST00000577228 MAML2Q8IZL2 1156 aaPredicted RBP12.98□□□□□ -0.33
CDH8-202ENST00000577228 DDX27Q96GQ7 796 aaKnown RBP12.98□□□□□ -0.33
CDH8-202ENST00000577228 C8orf76Q96K31 380 aa12.98□□□□□ -0.33
CDH8-202ENST00000577228 OSBPL6Q9BZF3 934 aa12.98□□□□□ -0.33
CDH8-202ENST00000577228 BHMT2Q9H2M3 363 aa12.98□□□□□ -0.33
CDH8-202ENST00000577228 GOLGA2P5Q9HBQ8 144 aa12.98□□□□□ -0.33
CDH8-202ENST00000577228 POLD4Q9HCU8 107 aa12.98□□□□□ -0.33
CDH8-202ENST00000577228 LTB4R2Q9NPC1 389 aa12.98□□□□□ -0.33
CDH8-202ENST00000577228 ZNF292O60281 2723 aa12.98□□□□□ -0.33
CDH8-202ENST00000577228 CACNA1IQ9P0X4 2223 aa12.98□□□□□ -0.33
CDH8-202ENST00000577228 COL4A3Q01955 1670 aa12.98□□□□□ -0.33
CDH8-202ENST00000577228 MIA3Q5JRA6 1907 aa12.98□□□□□ -0.33
CDH8-202ENST00000577228 SMIM28A0A1B0GU29 152 aa12.97□□□□□ -0.33
CDH8-202ENST00000577228 FAM170BA6NMN3 283 aa12.97□□□□□ -0.33
CDH8-202ENST00000577228 K7ERI5 159 aa12.97□□□□□ -0.33
CDH8-202ENST00000577228 ECI2O75521 394 aa12.97□□□□□ -0.33
CDH8-202ENST00000577228 RHOP08100 348 aa12.97□□□□□ -0.33
CDH8-202ENST00000577228 GRM5P41594 1212 aa12.97□□□□□ -0.33
CDH8-202ENST00000577228 MAGEA9P43362 315 aa12.97□□□□□ -0.33
CDH8-202ENST00000577228 YARSP54577 528 aaKnown RBP12.97□□□□□ -0.33
CDH8-202ENST00000577228 ZNF528Q3MIS6 628 aa12.97□□□□□ -0.33
CDH8-202ENST00000577228 TTC38Q5R3I4 469 aa12.97□□□□□ -0.33
CDH8-202ENST00000577228 C3orf58Q8NDZ4 430 aa12.97□□□□□ -0.33
CDH8-202ENST00000577228 MCRS1Q96EZ8 462 aa12.97□□□□□ -0.33
CDH8-202ENST00000577228 CCDC94Q9BW85 323 aaPredicted RBP12.97□□□□□ -0.33
CDH8-202ENST00000577228 TOPORSQ9NS56 1045 aaPredicted RBP12.97□□□□□ -0.33
CDH8-202ENST00000577228 GDE1Q9NZC3 331 aa12.97□□□□□ -0.33
CDH8-202ENST00000577228 FBXO4Q9UKT5 387 aa12.97□□□□□ -0.33
CDH8-202ENST00000577228 TNFSF13BQ9Y275 285 aa12.97□□□□□ -0.33
CDH8-202ENST00000577228 MTF2Q9Y483 593 aaPredicted RBP12.97□□□□□ -0.33
CDH8-202ENST00000577228 DMDP11532 3685 aa12.97□□□□□ -0.33
CDH8-202ENST00000577228 FANCMQ8IYD8 2048 aa12.96□□□□□ -0.33
CDH8-202ENST00000577228 PHLPP2Q6ZVD8 1323 aa12.96□□□□□ -0.33
CDH8-202ENST00000577228 CCDC169A6NNP5 214 aa12.96□□□□□ -0.33
CDH8-202ENST00000577228 PRRG1O14668 218 aa12.96□□□□□ -0.33
CDH8-202ENST00000577228 SPTLC1O15269 473 aa12.96□□□□□ -0.33
CDH8-202ENST00000577228 LRG1P02750 347 aa12.96□□□□□ -0.33
CDH8-202ENST00000577228 CD72P21854 359 aa12.96□□□□□ -0.33
CDH8-202ENST00000577228 ELF1P32519 619 aa12.96□□□□□ -0.33
CDH8-202ENST00000577228 FXR2P51116 673 aaKnown RBP eCLIP12.96□□□□□ -0.33
CDH8-202ENST00000577228 OSTNP61366 133 aa12.96□□□□□ -0.33
CDH8-202ENST00000577228 ROR1Q01973 937 aa12.96□□□□□ -0.33
CDH8-202ENST00000577228 CSTF1Q05048 431 aaKnown RBP12.96□□□□□ -0.33
CDH8-202ENST00000577228 SOX4Q06945 474 aaPredicted RBP12.96□□□□□ -0.33
CDH8-202ENST00000577228 ECM1Q16610 540 aa12.96□□□□□ -0.33
CDH8-202ENST00000577228 SLC5A9Q2M3M2 681 aa12.96□□□□□ -0.33
CDH8-202ENST00000577228 ZNF568Q3ZCX4 644 aa12.96□□□□□ -0.33
CDH8-202ENST00000577228 VARS2Q5ST30 1063 aaKnown RBP12.96□□□□□ -0.33
CDH8-202ENST00000577228 ZBTB41Q5SVQ8 909 aa12.96□□□□□ -0.33
CDH8-202ENST00000577228 SLC8B1Q6J4K2 584 aa12.96□□□□□ -0.33
CDH8-202ENST00000577228 TPRG1Q6ZUI0 275 aa12.96□□□□□ -0.33
CDH8-202ENST00000577228 DGLUCYQ7Z3D6 616 aa12.96□□□□□ -0.33
CDH8-202ENST00000577228 DCLK2Q8N568 766 aa12.96□□□□□ -0.33
CDH8-202ENST00000577228 CEP120Q8N960 986 aa12.96□□□□□ -0.33
CDH8-202ENST00000577228 SUMF1Q8NBK3 374 aa12.96□□□□□ -0.33
CDH8-202ENST00000577228 CDT1Q9H211 546 aa12.96□□□□□ -0.33
CDH8-202ENST00000577228 FOXP1Q9H334 677 aaPredicted RBP12.96□□□□□ -0.33
CDH8-202ENST00000577228 AVENQ9NQS1 362 aaPredicted RBP12.96□□□□□ -0.33
CDH8-202ENST00000577228 SLC38A7Q9NVC3 462 aa12.96□□□□□ -0.33
CDH8-202ENST00000577228 LRWD1Q9UFC0 647 aa12.96□□□□□ -0.33
CDH8-202ENST00000577228 KIAA1024Q9UPX6 916 aa12.96□□□□□ -0.33
CDH8-202ENST00000577228 NOTCH4Q99466 2003 aa12.96□□□□□ -0.34
CDH8-202ENST00000577228 GPR179Q6PRD1 2367 aa12.95□□□□□ -0.34
CDH8-202ENST00000577228 ARHGEF37A1IGU5 675 aa12.95□□□□□ -0.34
CDH8-202ENST00000577228 PODXLO00592 558 aa12.95□□□□□ -0.34
CDH8-202ENST00000577228 CEBPBP17676 345 aa12.95□□□□□ -0.34
CDH8-202ENST00000577228 PTPN2P17706 415 aa12.95□□□□□ -0.34
CDH8-202ENST00000577228 TARSP26639 723 aaKnown RBP12.95□□□□□ -0.34
CDH8-202ENST00000577228 ARPP19P56211 112 aa12.95□□□□□ -0.34
CDH8-202ENST00000577228 PEX3P56589 373 aa12.95□□□□□ -0.34
CDH8-202ENST00000577228 GNL2Q13823 731 aaKnown RBP12.95□□□□□ -0.34
CDH8-202ENST00000577228 PUM1Q14671 1186 aaKnown RBP eCLIP12.95□□□□□ -0.34
CDH8-202ENST00000577228 XKR4Q5GH76 650 aa12.95□□□□□ -0.34
CDH8-202ENST00000577228 CCDC83Q8IWF9 413 aa12.95□□□□□ -0.34
CDH8-202ENST00000577228 ZNF461Q8TAF7 563 aa12.95□□□□□ -0.34
CDH8-202ENST00000577228 SNX29Q8TEQ0 813 aa12.95□□□□□ -0.34
CDH8-202ENST00000577228 ATRIPQ8WXE1 791 aa12.95□□□□□ -0.34
CDH8-202ENST00000577228 BORCS6Q96GS4 357 aa12.95□□□□□ -0.34
CDH8-202ENST00000577228 NELL2Q99435 816 aa12.95□□□□□ -0.34
CDH8-202ENST00000577228 ACO2Q99798 780 aaKnown RBP12.95□□□□□ -0.34
CDH8-202ENST00000577228 MRPL4Q9BYD3 311 aaKnown RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms