RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 DRD4P21917 467 aa13.86□□□□□ -0.19
PCDHGB3-201ENST00000576222 ALDH1B1P30837 517 aa13.86□□□□□ -0.19
PCDHGB3-201ENST00000576222 CENPCQ03188 943 aa13.86□□□□□ -0.19
PCDHGB3-201ENST00000576222 KIF22Q14807 665 aa13.86□□□□□ -0.19
PCDHGB3-201ENST00000576222 CYTH1Q15438 398 aa13.86□□□□□ -0.19
PCDHGB3-201ENST00000576222 CDO1Q16878 200 aa13.86□□□□□ -0.19
PCDHGB3-201ENST00000576222 FAM98CQ17RN3 349 aaKnown RBP13.86□□□□□ -0.19
PCDHGB3-201ENST00000576222 DCLK2Q8N568 766 aa13.86□□□□□ -0.19
PCDHGB3-201ENST00000576222 CCDC68Q9H2F9 335 aa13.86□□□□□ -0.19
PCDHGB3-201ENST00000576222 KIAA1586Q9HCI6 787 aa13.86□□□□□ -0.19
PCDHGB3-201ENST00000576222 A1CFQ9NQ94 594 aaKnown RBP13.86□□□□□ -0.19
PCDHGB3-201ENST00000576222 PICK1Q9NRD5 415 aa13.86□□□□□ -0.19
PCDHGB3-201ENST00000576222 NRBP2Q9NSY0 501 aa13.86□□□□□ -0.19
PCDHGB3-201ENST00000576222 PARVAQ9NVD7 372 aa13.86□□□□□ -0.19
PCDHGB3-201ENST00000576222 GTF3C4Q9UKN8 822 aa13.86□□□□□ -0.19
PCDHGB3-201ENST00000576222 MAGED2Q9UNF1 606 aaPredicted RBP13.86□□□□□ -0.19
PCDHGB3-201ENST00000576222 TRIM33Q9UPN9 1127 aa13.86□□□□□ -0.19
PCDHGB3-201ENST00000576222 PPLO60437 1756 aa13.86□□□□□ -0.19
PCDHGB3-201ENST00000576222 SYNJ2BP-COX16A0A087WUM0 186 aa13.86□□□□□ -0.19
PCDHGB3-201ENST00000576222 BBOX1O75936 387 aa13.86□□□□□ -0.19
PCDHGB3-201ENST00000576222 KRT4P19013 534 aa13.86□□□□□ -0.19
PCDHGB3-201ENST00000576222 RPA1P27694 616 aa13.86□□□□□ -0.19
PCDHGB3-201ENST00000576222 ARL4AP40617 200 aa13.86□□□□□ -0.19
PCDHGB3-201ENST00000576222 KCNQ4P56696 695 aa13.86□□□□□ -0.19
PCDHGB3-201ENST00000576222 MTERF2Q49AM1 385 aa13.86□□□□□ -0.19
PCDHGB3-201ENST00000576222 TMEM179Q6ZVK1 233 aa13.86□□□□□ -0.19
PCDHGB3-201ENST00000576222 ACAD11Q709F0 780 aa13.86□□□□□ -0.19
PCDHGB3-201ENST00000576222 CATSPER1Q8NEC5 780 aa13.86□□□□□ -0.19
PCDHGB3-201ENST00000576222 ATP8B4Q8TF62 1192 aa13.86□□□□□ -0.19
PCDHGB3-201ENST00000576222 CPA5Q8WXQ8 436 aa13.86□□□□□ -0.19
PCDHGB3-201ENST00000576222 MSTO1Q9BUK6 570 aa13.86□□□□□ -0.19
PCDHGB3-201ENST00000576222 TUFT1Q9NNX1 390 aa13.86□□□□□ -0.19
PCDHGB3-201ENST00000576222 CD209Q9NNX6 404 aa13.86□□□□□ -0.19
PCDHGB3-201ENST00000576222 COX16Q9P0S2 106 aa13.86□□□□□ -0.19
PCDHGB3-201ENST00000576222 TAF1BQ53T94 588 aaPredicted RBP13.85□□□□□ -0.19
PCDHGB3-201ENST00000576222 WASHC2DQ5SRD0 308 aa13.85□□□□□ -0.19
PCDHGB3-201ENST00000576222 ATG4AQ8WYN0 398 aa13.85□□□□□ -0.19
PCDHGB3-201ENST00000576222 CYP26B1Q9NR63 512 aa13.85□□□□□ -0.19
PCDHGB3-201ENST00000576222 PAIP2BQ9ULR5 123 aaKnown RBP13.85□□□□□ -0.19
PCDHGB3-201ENST00000576222 ATP9AO75110 1047 aa13.85□□□□□ -0.19
PCDHGB3-201ENST00000576222 P4HBP07237 508 aaKnown RBP13.85□□□□□ -0.19
PCDHGB3-201ENST00000576222 SMARCA1P28370 1054 aa13.85□□□□□ -0.19
PCDHGB3-201ENST00000576222 CACNA2D1P54289 1103 aa13.85□□□□□ -0.19
PCDHGB3-201ENST00000576222 DSG1Q02413 1049 aa13.85□□□□□ -0.19
PCDHGB3-201ENST00000576222 STX3Q13277 289 aa13.85□□□□□ -0.19
PCDHGB3-201ENST00000576222 SLFN12LQ6IEE8 588 aa13.85□□□□□ -0.19
PCDHGB3-201ENST00000576222 RBBP8NLQ8NC74 664 aaPredicted RBP13.85□□□□□ -0.19
PCDHGB3-201ENST00000576222 JDP2Q8WYK2 163 aa13.85□□□□□ -0.19
PCDHGB3-201ENST00000576222 LRCH1Q9Y2L9 728 aa13.85□□□□□ -0.19
PCDHGB3-201ENST00000576222 KPNA7A9QM74 516 aa13.85□□□□□ -0.19
PCDHGB3-201ENST00000576222 TBX3O15119 743 aa13.85□□□□□ -0.19
PCDHGB3-201ENST00000576222 RALAP11233 206 aa13.85□□□□□ -0.19
PCDHGB3-201ENST00000576222 CALB2P22676 271 aa13.85□□□□□ -0.19
PCDHGB3-201ENST00000576222 CASP4P49662 377 aa13.85□□□□□ -0.19
PCDHGB3-201ENST00000576222 MRPS9P82933 396 aaKnown RBP13.85□□□□□ -0.19
PCDHGB3-201ENST00000576222 MTDHQ86UE4 582 aaKnown RBP13.85□□□□□ -0.19
PCDHGB3-201ENST00000576222 ZNF34Q8IZ26 560 aa13.85□□□□□ -0.19
PCDHGB3-201ENST00000576222 MCUQ8NE86 351 aa13.85□□□□□ -0.19
PCDHGB3-201ENST00000576222 STK32AQ8WU08 396 aa13.85□□□□□ -0.19
PCDHGB3-201ENST00000576222 HSPBP1Q9NZL4 362 aa13.85□□□□□ -0.19
PCDHGB3-201ENST00000576222 STRIP2Q9ULQ0 834 aa13.85□□□□□ -0.19
PCDHGB3-201ENST00000576222 KCNJ2P63252 427 aa13.85□□□□□ -0.19
PCDHGB3-201ENST00000576222 IFRD2Q12894 506 aaPredicted RBP13.85□□□□□ -0.19
PCDHGB3-201ENST00000576222 PPP6R3Q5H9R7 873 aaPredicted RBP13.85□□□□□ -0.19
PCDHGB3-201ENST00000576222 SPDYCQ5MJ68 293 aa13.85□□□□□ -0.19
PCDHGB3-201ENST00000576222 NT5DC3Q86UY8 548 aa13.85□□□□□ -0.19
PCDHGB3-201ENST00000576222 SCFD1Q8WVM8 642 aa13.85□□□□□ -0.19
PCDHGB3-201ENST00000576222 PALM3A6NDB9 673 aaPredicted RBP13.84□□□□□ -0.19
PCDHGB3-201ENST00000576222 EPHB6O15197 1021 aa13.84□□□□□ -0.19
PCDHGB3-201ENST00000576222 EIF3DO15371 548 aaKnown RBP eCLIP13.84□□□□□ -0.19
PCDHGB3-201ENST00000576222 RPL21P46778 160 aaKnown RBP13.84□□□□□ -0.19
PCDHGB3-201ENST00000576222 EPHA7Q15375 998 aa13.84□□□□□ -0.19
PCDHGB3-201ENST00000576222 SNX30Q5VWJ9 437 aa13.84□□□□□ -0.19
PCDHGB3-201ENST00000576222 FAM149B1Q96BN6 582 aa13.84□□□□□ -0.19
PCDHGB3-201ENST00000576222 NAALADL1Q9UQQ1 740 aa13.84□□□□□ -0.19
PCDHGB3-201ENST00000576222 LDHAP00338 332 aaKnown RBP13.84□□□□□ -0.19
PCDHGB3-201ENST00000576222 EIF2AK2P19525 551 aaKnown RBP13.84□□□□□ -0.19
PCDHGB3-201ENST00000576222 ZNF200P98182 395 aaPredicted RBP13.84□□□□□ -0.19
PCDHGB3-201ENST00000576222 PTK7Q13308 1070 aa13.84□□□□□ -0.19
PCDHGB3-201ENST00000576222 MIIPQ5JXC2 388 aa13.84□□□□□ -0.19
PCDHGB3-201ENST00000576222 RIOK1Q9BRS2 568 aaKnown RBP13.84□□□□□ -0.19
PCDHGB3-201ENST00000576222 ADA2Q9NZK5 511 aa13.84□□□□□ -0.19
PCDHGB3-201ENST00000576222 SRP68Q9UHB9 627 aaKnown RBP13.84□□□□□ -0.19
PCDHGB3-201ENST00000576222 ZHX2Q9Y6X8 837 aa13.84□□□□□ -0.19
PCDHGB3-201ENST00000576222 TBXAS1P24557 533 aaPredicted RBP13.84□□□□□ -0.19
PCDHGB3-201ENST00000576222 SSTR3P32745 418 aaPredicted RBP13.84□□□□□ -0.19
PCDHGB3-201ENST00000576222 QARSP47897 775 aaKnown RBP13.84□□□□□ -0.19
PCDHGB3-201ENST00000576222 ZBTB33Q86T24 672 aa13.84□□□□□ -0.19
PCDHGB3-201ENST00000576222 PRPF39Q86UA1 669 aaKnown RBP13.84□□□□□ -0.19
PCDHGB3-201ENST00000576222 CATSPER3Q86XQ3 398 aa13.84□□□□□ -0.19
PCDHGB3-201ENST00000576222 KCNK16Q96T55 309 aa13.84□□□□□ -0.19
PCDHGB3-201ENST00000576222 ADPGKQ9BRR6 497 aa13.84□□□□□ -0.19
PCDHGB3-201ENST00000576222 APOL6Q9BWW8 343 aa13.84□□□□□ -0.19
PCDHGB3-201ENST00000576222 E7ENQ6 273 aa13.83□□□□□ -0.19
PCDHGB3-201ENST00000576222 ROR1Q01973 937 aa13.83□□□□□ -0.19
PCDHGB3-201ENST00000576222 MFN1Q8IWA4 741 aa13.83□□□□□ -0.19
PCDHGB3-201ENST00000576222 TMEM237Q96Q45 408 aa13.83□□□□□ -0.19
PCDHGB3-201ENST00000576222 RHBDL2Q9NX52 303 aa13.83□□□□□ -0.19
PCDHGB3-201ENST00000576222 F5H6K3 240 aa13.83□□□□□ -0.2
PCDHGB3-201ENST00000576222 ADCY3O60266 1144 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms