RNA–Protein interactions for RNA: ENST00000575214.1

HCFC1R1-208, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 2

Gene HCFC1R1, Length 1,365 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-208ENST00000575214 A0A1W2PQ27 194 aa22.57■■□□□ 1.2
HCFC1R1-208ENST00000575214 A0A1W2PQ64 194 aa22.57■■□□□ 1.2
HCFC1R1-208ENST00000575214 A0A1W2PQD8 194 aa22.57■■□□□ 1.2
HCFC1R1-208ENST00000575214 MEFVO15553 781 aaPredicted RBP22.57■■□□□ 1.2
HCFC1R1-208ENST00000575214 PRPF6O94906 941 aaKnown RBP22.57■■□□□ 1.2
HCFC1R1-208ENST00000575214 EFEMP2O95967 443 aa22.57■■□□□ 1.2
HCFC1R1-208ENST00000575214 GLUD2P49448 558 aa22.57■■□□□ 1.2
HCFC1R1-208ENST00000575214 PPP2R3AQ06190 1150 aa22.57■■□□□ 1.2
HCFC1R1-208ENST00000575214 CUL4BQ13620 913 aa22.57■■□□□ 1.2
HCFC1R1-208ENST00000575214 PTCRAQ6ISU1 281 aaPredicted RBP22.57■■□□□ 1.2
HCFC1R1-208ENST00000575214 UNC13DQ70J99 1090 aa22.57■■□□□ 1.2
HCFC1R1-208ENST00000575214 VN1R2Q8NFZ6 395 aa22.57■■□□□ 1.2
HCFC1R1-208ENST00000575214 POMGNT1Q8WZA1 660 aa22.57■■□□□ 1.2
HCFC1R1-208ENST00000575214 UROC1Q96N76 676 aa22.57■■□□□ 1.2
HCFC1R1-208ENST00000575214 EMILIN2Q9BXX0 1053 aa22.57■■□□□ 1.2
HCFC1R1-208ENST00000575214 PLEKHA5Q9HAU0 1116 aa22.57■■□□□ 1.2
HCFC1R1-208ENST00000575214 USP25Q9UHP3 1055 aa22.57■■□□□ 1.2
HCFC1R1-208ENST00000575214 AGO2Q9UKV8 859 aaKnown RBP22.57■■□□□ 1.2
HCFC1R1-208ENST00000575214 SSX2IPQ9Y2D8 614 aa22.57■■□□□ 1.2
HCFC1R1-208ENST00000575214 FAM189A1O60320 539 aa22.56■■□□□ 1.2
HCFC1R1-208ENST00000575214 CLASP2O75122 1294 aaKnown RBP22.56■■□□□ 1.2
HCFC1R1-208ENST00000575214 ANP32AP39687 249 aaKnown RBP22.56■■□□□ 1.2
HCFC1R1-208ENST00000575214 CLCNKBP51801 687 aa22.56■■□□□ 1.2
HCFC1R1-208ENST00000575214 NDUFA8P51970 172 aa22.56■■□□□ 1.2
HCFC1R1-208ENST00000575214 SOX4Q06945 474 aaPredicted RBP22.56■■□□□ 1.2
HCFC1R1-208ENST00000575214 POSTNQ15063 836 aa22.56■■□□□ 1.2
HCFC1R1-208ENST00000575214 USP41Q3LFD5 358 aa22.56■■□□□ 1.2
HCFC1R1-208ENST00000575214 PUS10Q3MIT2 529 aaKnown RBP22.56■■□□□ 1.2
HCFC1R1-208ENST00000575214 FAM26FQ5R3K3 315 aa22.56■■□□□ 1.2
HCFC1R1-208ENST00000575214 ADAMTS19Q8TE59 1207 aa22.56■■□□□ 1.2
HCFC1R1-208ENST00000575214 PAGE5Q96GU1 130 aa22.56■■□□□ 1.2
HCFC1R1-208ENST00000575214 CLEC1BQ9P126 229 aa22.56■■□□□ 1.2
HCFC1R1-208ENST00000575214 CD207Q9UJ71 328 aa22.56■■□□□ 1.2
HCFC1R1-208ENST00000575214 STYXL1Q9Y6J8 313 aa22.56■■□□□ 1.2
HCFC1R1-208ENST00000575214 TTC26A0AVF1 554 aa22.55■■□□□ 1.2
HCFC1R1-208ENST00000575214 B3GAT3O94766 335 aa22.55■■□□□ 1.2
HCFC1R1-208ENST00000575214 DSG1Q02413 1049 aa22.55■■□□□ 1.2
HCFC1R1-208ENST00000575214 ENOX2Q16206 610 aaKnown RBP22.55■■□□□ 1.2
HCFC1R1-208ENST00000575214 UPP1Q16831 310 aa22.55■■□□□ 1.2
HCFC1R1-208ENST00000575214 GLIS3Q8NEA6 775 aa22.55■■□□□ 1.2
HCFC1R1-208ENST00000575214 C18orf25Q96B23 403 aaPredicted RBP22.55■■□□□ 1.2
HCFC1R1-208ENST00000575214 FAM212AQ96EL1 285 aa22.55■■□□□ 1.2
HCFC1R1-208ENST00000575214 KIF12Q96FN5 646 aa22.55■■□□□ 1.2
HCFC1R1-208ENST00000575214 B3GALT6Q96L58 329 aa22.55■■□□□ 1.2
HCFC1R1-208ENST00000575214 TMEM206Q9H813 350 aa22.55■■□□□ 1.2
HCFC1R1-208ENST00000575214 CPSF3Q9UKF6 684 aaKnown RBP22.55■■□□□ 1.2
HCFC1R1-208ENST00000575214 HCFC2Q9Y5Z7 792 aa22.55■■□□□ 1.2
HCFC1R1-208ENST00000575214 FAM237AA0A1B0GTK4 181 aa22.54■■□□□ 1.2
HCFC1R1-208ENST00000575214 LACTBL1A8MY62 500 aa22.54■■□□□ 1.2
HCFC1R1-208ENST00000575214 ADSSP30520 456 aa22.54■■□□□ 1.2
HCFC1R1-208ENST00000575214 ACOT2P49753 483 aa22.54■■□□□ 1.2
HCFC1R1-208ENST00000575214 SPAG1Q07617 926 aa22.54■■□□□ 1.2
HCFC1R1-208ENST00000575214 ELAVL2Q12926 359 aaKnown RBP22.54■■□□□ 1.2
HCFC1R1-208ENST00000575214 KCNC3Q14003 757 aa22.54■■□□□ 1.2
HCFC1R1-208ENST00000575214 DCLRE1AQ6PJP8 1040 aa22.54■■□□□ 1.2
HCFC1R1-208ENST00000575214 CASP10Q92851 521 aa22.54■■□□□ 1.2
HCFC1R1-208ENST00000575214 DDX27Q96GQ7 796 aaKnown RBP22.54■■□□□ 1.2
HCFC1R1-208ENST00000575214 MSLNLQ96KJ4 702 aa22.54■■□□□ 1.2
HCFC1R1-208ENST00000575214 KLHL5Q96PQ7 755 aa22.54■■□□□ 1.2
HCFC1R1-208ENST00000575214 GOLPH3LQ9H4A5 285 aa22.54■■□□□ 1.2
HCFC1R1-208ENST00000575214 CHST7Q9NS84 486 aa22.54■■□□□ 1.2
HCFC1R1-208ENST00000575214 CIZ1Q9ULV3 898 aaPredicted RBP22.54■■□□□ 1.2
HCFC1R1-208ENST00000575214 FAM50BQ9Y247 325 aa22.54■■□□□ 1.2
HCFC1R1-208ENST00000575214 TCHHQ07283 1943 aa22.54■■□□□ 1.2
HCFC1R1-208ENST00000575214 PVALEFA0A1B0GWK0 134 aa22.53■■□□□ 1.2
HCFC1R1-208ENST00000575214 GOLGA6L4A6NEF3 574 aa22.53■■□□□ 1.2
HCFC1R1-208ENST00000575214 GRXCR2A6NFK2 248 aa22.53■■□□□ 1.2
HCFC1R1-208ENST00000575214 TMEM189-UBE2V1I3L0A0 370 aa22.53■■□□□ 1.2
HCFC1R1-208ENST00000575214 PODXLO00592 558 aa22.53■■□□□ 1.2
HCFC1R1-208ENST00000575214 LILRB3O75022 631 aa22.53■■□□□ 1.2
HCFC1R1-208ENST00000575214 CNPP09543 421 aaKnown RBP22.53■■□□□ 1.2
HCFC1R1-208ENST00000575214 IL9P15248 144 aa22.53■■□□□ 1.2
HCFC1R1-208ENST00000575214 KLRC2P26717 231 aa22.53■■□□□ 1.2
HCFC1R1-208ENST00000575214 FAM171A1Q5VUB5 890 aa22.53■■□□□ 1.2
HCFC1R1-208ENST00000575214 KIAA0319Q5VV43 1072 aa22.53■■□□□ 1.2
HCFC1R1-208ENST00000575214 TMEM184AQ6ZMB5 413 aa22.53■■□□□ 1.2
HCFC1R1-208ENST00000575214 CEP57Q86XR8 500 aa22.53■■□□□ 1.2
HCFC1R1-208ENST00000575214 RIN2Q8WYP3 895 aaPredicted RBP22.53■■□□□ 1.2
HCFC1R1-208ENST00000575214 UHRF1Q96T88 793 aaPredicted RBP22.53■■□□□ 1.2
HCFC1R1-208ENST00000575214 TUBGCP4Q9UGJ1 667 aa22.53■■□□□ 1.2
HCFC1R1-208ENST00000575214 CITO14578 2027 aa22.52■■□□□ 1.2
HCFC1R1-208ENST00000575214 EIF3DO15371 548 aaKnown RBP eCLIP22.52■■□□□ 1.2
HCFC1R1-208ENST00000575214 SMAD4Q13485 552 aaKnown RBP22.52■■□□□ 1.2
HCFC1R1-208ENST00000575214 ANKRD54Q6NXT1 300 aa22.52■■□□□ 1.2
HCFC1R1-208ENST00000575214 PPFIBP1Q86W92 1011 aa22.52■■□□□ 1.2
HCFC1R1-208ENST00000575214 C3orf58Q8NDZ4 430 aa22.52■■□□□ 1.2
HCFC1R1-208ENST00000575214 TTPALQ9BTX7 342 aa22.52■■□□□ 1.2
HCFC1R1-208ENST00000575214 NCOR1O75376 2440 aa22.52■■□□□ 1.2
HCFC1R1-208ENST00000575214 MBTPS2O43462 519 aa22.51■■□□□ 1.19
HCFC1R1-208ENST00000575214 XPOTO43592 962 aaKnown RBP22.51■■□□□ 1.19
HCFC1R1-208ENST00000575214 ADH1AP07327 375 aa22.51■■□□□ 1.19
HCFC1R1-208ENST00000575214 GARTP22102 1010 aa22.51■■□□□ 1.19
HCFC1R1-208ENST00000575214 IGFBP6P24592 240 aaPredicted RBP22.51■■□□□ 1.19
HCFC1R1-208ENST00000575214 RPL9P32969 192 aaKnown RBP22.51■■□□□ 1.19
HCFC1R1-208ENST00000575214 EHHADHQ08426 723 aa22.51■■□□□ 1.19
HCFC1R1-208ENST00000575214 RTP2Q5QGT7 225 aa22.51■■□□□ 1.19
HCFC1R1-208ENST00000575214 CD302Q8IX05 232 aa22.51■■□□□ 1.19
HCFC1R1-208ENST00000575214 SMRP1Q8NCR6 262 aa22.51■■□□□ 1.19
HCFC1R1-208ENST00000575214 NECAB3Q96P71 396 aaPredicted RBP22.51■■□□□ 1.19
HCFC1R1-208ENST00000575214 SLC39A2Q9NP94 309 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms