RNA–Protein interactions for RNA: ENST00000574099.1

CCDC40-211, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-211ENST00000574099 PRMT7Q9NVM4 692 aaPredicted RBP19.37■□□□□ 0.69
CCDC40-211ENST00000574099 MRPS17Q9Y2R5 130 aaKnown RBP19.37■□□□□ 0.69
CCDC40-211ENST00000574099 GDAQ9Y2T3 454 aa19.37■□□□□ 0.69
CCDC40-211ENST00000574099 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.37■□□□□ 0.69
CCDC40-211ENST00000574099 ACACBO00763 2458 aa19.37■□□□□ 0.69
CCDC40-211ENST00000574099 I3L4J1 428 aa19.36■□□□□ 0.69
CCDC40-211ENST00000574099 N4BP3O15049 544 aa19.36■□□□□ 0.69
CCDC40-211ENST00000574099 LYPLA2O95372 231 aa19.36■□□□□ 0.69
CCDC40-211ENST00000574099 FGFR3P22607 806 aa19.36■□□□□ 0.69
CCDC40-211ENST00000574099 TKTP29401 623 aaKnown RBP19.36■□□□□ 0.69
CCDC40-211ENST00000574099 PPP4R3CPQ6ZMV5 832 aa19.36■□□□□ 0.69
CCDC40-211ENST00000574099 ZBTB8OSQ8IWT0 167 aa19.36■□□□□ 0.69
CCDC40-211ENST00000574099 PRIMPOLQ96LW4 560 aa19.36■□□□□ 0.69
CCDC40-211ENST00000574099 HSD17B14Q9BPX1 270 aa19.36■□□□□ 0.69
CCDC40-211ENST00000574099 RAB23Q9ULC3 237 aa19.36■□□□□ 0.69
CCDC40-211ENST00000574099 CYP46A1Q9Y6A2 500 aa19.36■□□□□ 0.69
CCDC40-211ENST00000574099 COL4A2P08572 1712 aa19.36■□□□□ 0.69
CCDC40-211ENST00000574099 B3GAT3O94766 335 aa19.35■□□□□ 0.69
CCDC40-211ENST00000574099 XBP1P17861 261 aa19.35■□□□□ 0.69
CCDC40-211ENST00000574099 NR5A1Q13285 461 aa19.35■□□□□ 0.69
CCDC40-211ENST00000574099 ST3GAL2Q16842 350 aa19.35■□□□□ 0.69
CCDC40-211ENST00000574099 PRR23BQ6ZRT6 265 aa19.35■□□□□ 0.69
CCDC40-211ENST00000574099 ELSPBP1Q96BH3 223 aa19.35■□□□□ 0.69
CCDC40-211ENST00000574099 DDX27Q96GQ7 796 aaKnown RBP19.35■□□□□ 0.69
CCDC40-211ENST00000574099 FZD8Q9H461 694 aa19.35■□□□□ 0.69
CCDC40-211ENST00000574099 BRD9Q9H8M2 597 aa19.35■□□□□ 0.69
CCDC40-211ENST00000574099 GDE1Q9NZC3 331 aa19.35■□□□□ 0.69
CCDC40-211ENST00000574099 PCDHA12Q9UN75 941 aa19.35■□□□□ 0.69
CCDC40-211ENST00000574099 TRIP11Q15643 1979 aa19.35■□□□□ 0.69
CCDC40-211ENST00000574099 LRG1P02750 347 aa19.34■□□□□ 0.69
CCDC40-211ENST00000574099 EDN1P05305 212 aa19.34■□□□□ 0.69
CCDC40-211ENST00000574099 ADRB1P08588 477 aa19.34■□□□□ 0.69
CCDC40-211ENST00000574099 FCARP24071 287 aa19.34■□□□□ 0.69
CCDC40-211ENST00000574099 CLCNKBP51801 687 aa19.34■□□□□ 0.69
CCDC40-211ENST00000574099 SCRN1Q12765 414 aa19.34■□□□□ 0.69
CCDC40-211ENST00000574099 PRPF4BQ13523 1007 aaKnown RBP19.34■□□□□ 0.69
CCDC40-211ENST00000574099 CALCRLQ16602 461 aa19.34■□□□□ 0.69
CCDC40-211ENST00000574099 EEF1DP3Q658K8 133 aa19.34■□□□□ 0.69
CCDC40-211ENST00000574099 CDCA2Q69YH5 1023 aaPredicted RBP19.34■□□□□ 0.69
CCDC40-211ENST00000574099 CENPQQ7L2Z9 268 aaPredicted RBP19.34■□□□□ 0.69
CCDC40-211ENST00000574099 DNASE1L2Q92874 299 aa19.34■□□□□ 0.69
CCDC40-211ENST00000574099 ADPGKQ9BRR6 497 aa19.34■□□□□ 0.69
CCDC40-211ENST00000574099 FAM126AQ9BYI3 521 aaPredicted RBP19.34■□□□□ 0.69
CCDC40-211ENST00000574099 CHRDQ9H2X0 955 aa19.34■□□□□ 0.69
CCDC40-211ENST00000574099 TTC12Q9H892 705 aaPredicted RBP19.34■□□□□ 0.69
CCDC40-211ENST00000574099 GOLGA2P5Q9HBQ8 144 aa19.34■□□□□ 0.69
CCDC40-211ENST00000574099 LOC105378220A0A1B0GUY1 285 aaPredicted RBP19.33■□□□□ 0.68
CCDC40-211ENST00000574099 NRG2O14511 850 aaPredicted RBP19.33■□□□□ 0.68
CCDC40-211ENST00000574099 CDKL5O76039 1030 aa19.33■□□□□ 0.68
CCDC40-211ENST00000574099 REC8O95072 547 aa19.33■□□□□ 0.68
CCDC40-211ENST00000574099 PRKCBP05771 671 aa19.33■□□□□ 0.68
CCDC40-211ENST00000574099 TDGF1P13385 188 aa19.33■□□□□ 0.68
CCDC40-211ENST00000574099 KCNA4P22459 653 aa19.33■□□□□ 0.68
CCDC40-211ENST00000574099 TXKP42681 527 aa19.33■□□□□ 0.68
CCDC40-211ENST00000574099 BRCC3P46736 316 aa19.33■□□□□ 0.68
CCDC40-211ENST00000574099 FAM187BQ17R55 369 aa19.33■□□□□ 0.68
CCDC40-211ENST00000574099 PPM1JQ5JR12 505 aa19.33■□□□□ 0.68
CCDC40-211ENST00000574099 C3orf58Q8NDZ4 430 aa19.33■□□□□ 0.68
CCDC40-211ENST00000574099 BSNDQ8WZ55 320 aa19.33■□□□□ 0.68
CCDC40-211ENST00000574099 TCEAL4Q96EI5 215 aa19.33■□□□□ 0.68
CCDC40-211ENST00000574099 CORO1BQ9BR76 489 aa19.33■□□□□ 0.68
CCDC40-211ENST00000574099 MAP1BP46821 2468 aaKnown RBP19.33■□□□□ 0.68
CCDC40-211ENST00000574099 STK36Q9NRP7 1315 aa19.32■□□□□ 0.68
CCDC40-211ENST00000574099 PRRG1O14668 218 aa19.32■□□□□ 0.68
CCDC40-211ENST00000574099 PTPN2P17706 415 aa19.32■□□□□ 0.68
CCDC40-211ENST00000574099 ATP2B1P20020 1258 aa19.32■□□□□ 0.68
CCDC40-211ENST00000574099 ARPP19P56211 112 aa19.32■□□□□ 0.68
CCDC40-211ENST00000574099 ROR1Q01973 937 aa19.32■□□□□ 0.68
CCDC40-211ENST00000574099 MAPK6Q16659 721 aa19.32■□□□□ 0.68
CCDC40-211ENST00000574099 FAM78AQ5JUQ0 283 aa19.32■□□□□ 0.68
CCDC40-211ENST00000574099 LAIR1Q6GTX8 287 aa19.32■□□□□ 0.68
CCDC40-211ENST00000574099 ANKS3Q6ZW76 656 aa19.32■□□□□ 0.68
CCDC40-211ENST00000574099 ZNF687Q8N1G0 1237 aa19.32■□□□□ 0.68
CCDC40-211ENST00000574099 ZFP14Q9HCL3 533 aa19.32■□□□□ 0.68
CCDC40-211ENST00000574099 BACE2Q9Y5Z0 518 aa19.32■□□□□ 0.68
CCDC40-211ENST00000574099 ZFHX4Q86UP3 3567 aa19.32■□□□□ 0.68
CCDC40-211ENST00000574099 TMEM189-UBE2V1I3L0A0 370 aa19.31■□□□□ 0.68
CCDC40-211ENST00000574099 MAN2B1O00754 1011 aa19.31■□□□□ 0.68
CCDC40-211ENST00000574099 WNT7AO00755 349 aa19.31■□□□□ 0.68
CCDC40-211ENST00000574099 ELF1P32519 619 aa19.31■□□□□ 0.68
CCDC40-211ENST00000574099 KRT2P35908 639 aa19.31■□□□□ 0.68
CCDC40-211ENST00000574099 NRLP54845 237 aa19.31■□□□□ 0.68
CCDC40-211ENST00000574099 PRSS36Q5K4E3 855 aa19.31■□□□□ 0.68
CCDC40-211ENST00000574099 CD300LGQ6UXG3 332 aa19.31■□□□□ 0.68
CCDC40-211ENST00000574099 RTL10Q7L3V2 364 aa19.31■□□□□ 0.68
CCDC40-211ENST00000574099 MCPH1Q8NEM0 835 aa19.31■□□□□ 0.68
CCDC40-211ENST00000574099 NETO1Q8TDF5 533 aa19.31■□□□□ 0.68
CCDC40-211ENST00000574099 FAM3CQ92520 227 aa19.31■□□□□ 0.68
CCDC40-211ENST00000574099 CHAMP1Q96JM3 812 aa19.31■□□□□ 0.68
CCDC40-211ENST00000574099 PPP1R10Q96QC0 940 aaKnown RBP19.31■□□□□ 0.68
CCDC40-211ENST00000574099 KIFC3Q9BVG8 833 aa19.31■□□□□ 0.68
CCDC40-211ENST00000574099 TRMT61BQ9BVS5 477 aaKnown RBP19.31■□□□□ 0.68
CCDC40-211ENST00000574099 C2orf40Q9H1Z8 148 aa19.31■□□□□ 0.68
CCDC40-211ENST00000574099 LMAN1LQ9HAT1 526 aa19.31■□□□□ 0.68
CCDC40-211ENST00000574099 PDRG1Q9NUG6 133 aa19.31■□□□□ 0.68
CCDC40-211ENST00000574099 PDCD11Q14690 1871 aaKnown RBP19.31■□□□□ 0.68
CCDC40-211ENST00000574099 RALGAPA1Q6GYQ0 2036 aa19.3■□□□□ 0.68
CCDC40-211ENST00000574099 WDR27A2RRH5 827 aa19.3■□□□□ 0.68
CCDC40-211ENST00000574099 NEMFO60524 1076 aa19.3■□□□□ 0.68
CCDC40-211ENST00000574099 GDI1P31150 447 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms