RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 PI4K2AQ9BTU6 479 aa20.34■□□□□ 0.85
SCARF1-206ENST00000573852 THAP12O43422 761 aa20.34■□□□□ 0.85
SCARF1-206ENST00000573852 SUN1O94901 812 aa20.34■□□□□ 0.85
SCARF1-206ENST00000573852 LYPLA2O95372 231 aa20.34■□□□□ 0.85
SCARF1-206ENST00000573852 MMP10P09238 476 aa20.34■□□□□ 0.85
SCARF1-206ENST00000573852 KRT5P13647 590 aa20.34■□□□□ 0.85
SCARF1-206ENST00000573852 BRAFP15056 766 aa20.34■□□□□ 0.85
SCARF1-206ENST00000573852 MRPS9P82933 396 aaKnown RBP20.34■□□□□ 0.85
SCARF1-206ENST00000573852 C2CD6Q53TS8 623 aa20.34■□□□□ 0.85
SCARF1-206ENST00000573852 PLA2G4FQ68DD2 849 aa20.34■□□□□ 0.85
SCARF1-206ENST00000573852 FAM160B2Q86V87 743 aa20.34■□□□□ 0.85
SCARF1-206ENST00000573852 C7orf43Q8WVR3 580 aa20.34■□□□□ 0.85
SCARF1-206ENST00000573852 IWS1Q96ST2 819 aa20.34■□□□□ 0.85
SCARF1-206ENST00000573852 DEFB129Q9H1M3 183 aa20.34■□□□□ 0.85
SCARF1-206ENST00000573852 ATP6V0A4Q9HBG4 840 aa20.34■□□□□ 0.85
SCARF1-206ENST00000573852 ANAPC5Q9UJX4 755 aa20.34■□□□□ 0.85
SCARF1-206ENST00000573852 CCPG1Q9ULG6 757 aa20.34■□□□□ 0.85
SCARF1-206ENST00000573852 ATP5DP30049 168 aa20.33■□□□□ 0.85
SCARF1-206ENST00000573852 ADCY8P40145 1251 aa20.33■□□□□ 0.85
SCARF1-206ENST00000573852 ZNF268Q14587 947 aaPredicted RBP20.33■□□□□ 0.85
SCARF1-206ENST00000573852 TLDC1Q6P9B6 456 aa20.33■□□□□ 0.85
SCARF1-206ENST00000573852 SEPT14Q6ZU15 432 aa20.33■□□□□ 0.85
SCARF1-206ENST00000573852 TMEM161BQ8NDZ6 487 aa20.33■□□□□ 0.85
SCARF1-206ENST00000573852 TBK1Q9UHD2 729 aa20.33■□□□□ 0.85
SCARF1-206ENST00000573852 PLA2G6O60733 806 aa20.33■□□□□ 0.84
SCARF1-206ENST00000573852 UNGP13051 313 aaPredicted RBP20.33■□□□□ 0.84
SCARF1-206ENST00000573852 ATF2P15336 505 aa20.33■□□□□ 0.84
SCARF1-206ENST00000573852 ZKSCAN8Q15776 578 aaPredicted RBP20.33■□□□□ 0.84
SCARF1-206ENST00000573852 SYDE1Q6ZW31 735 aaPredicted RBP20.33■□□□□ 0.84
SCARF1-206ENST00000573852 SV2AQ7L0J3 742 aa20.33■□□□□ 0.84
SCARF1-206ENST00000573852 MCOLN2Q8IZK6 566 aa20.33■□□□□ 0.84
SCARF1-206ENST00000573852 CPA5Q8WXQ8 436 aa20.33■□□□□ 0.84
SCARF1-206ENST00000573852 FAM118BQ9BPY3 351 aa20.33■□□□□ 0.84
SCARF1-206ENST00000573852 HEMGNQ9BXL5 484 aa20.33■□□□□ 0.84
SCARF1-206ENST00000573852 PNMA3Q9UL41 463 aa20.33■□□□□ 0.84
SCARF1-206ENST00000573852 UBIAD1Q9Y5Z9 338 aa20.33■□□□□ 0.84
SCARF1-206ENST00000573852 ZNF536O15090 1300 aa20.33■□□□□ 0.84
SCARF1-206ENST00000573852 O00370 1275 aa20.32■□□□□ 0.84
SCARF1-206ENST00000573852 RRM1P23921 792 aa20.32■□□□□ 0.84
SCARF1-206ENST00000573852 BNIP1Q12981 228 aa20.32■□□□□ 0.84
SCARF1-206ENST00000573852 SPATA21Q7Z572 469 aa20.32■□□□□ 0.84
SCARF1-206ENST00000573852 CDAN1Q8IWY9 1227 aa20.32■□□□□ 0.84
SCARF1-206ENST00000573852 STAMBPL1Q96FJ0 436 aa20.32■□□□□ 0.84
SCARF1-206ENST00000573852 DDX27Q96GQ7 796 aaKnown RBP20.32■□□□□ 0.84
SCARF1-206ENST00000573852 TRAIPQ9BWF2 469 aa20.32■□□□□ 0.84
SCARF1-206ENST00000573852 FEM1BQ9UK73 627 aa20.32■□□□□ 0.84
SCARF1-206ENST00000573852 L3MBTL1Q9Y468 752 aa20.32■□□□□ 0.84
SCARF1-206ENST00000573852 IGF2BP3O00425 579 aaKnown RBP eCLIP20.32■□□□□ 0.84
SCARF1-206ENST00000573852 TCEA3O75764 348 aa20.32■□□□□ 0.84
SCARF1-206ENST00000573852 GJB6O95452 261 aa20.32■□□□□ 0.84
SCARF1-206ENST00000573852 GAS8O95995 478 aa20.32■□□□□ 0.84
SCARF1-206ENST00000573852 NPTX2P47972 431 aa20.32■□□□□ 0.84
SCARF1-206ENST00000573852 ALDH5A1P51649 535 aaPredicted RBP20.32■□□□□ 0.84
SCARF1-206ENST00000573852 ADCY1Q08828 1119 aa20.32■□□□□ 0.84
SCARF1-206ENST00000573852 XKR9Q5GH70 373 aa20.32■□□□□ 0.84
SCARF1-206ENST00000573852 CGB2Q6NT52 195 aa20.32■□□□□ 0.84
SCARF1-206ENST00000573852 SLC39A4Q6P5W5 647 aa20.32■□□□□ 0.84
SCARF1-206ENST00000573852 CRELD2Q6UXH1 353 aaPredicted RBP20.32■□□□□ 0.84
SCARF1-206ENST00000573852 NIPA1Q7RTP0 329 aa20.32■□□□□ 0.84
SCARF1-206ENST00000573852 ATL2Q8NHH9 583 aa20.32■□□□□ 0.84
SCARF1-206ENST00000573852 PRKAG3Q9UGI9 489 aa20.32■□□□□ 0.84
SCARF1-206ENST00000573852 ARL2BPQ9Y2Y0 163 aa20.32■□□□□ 0.84
SCARF1-206ENST00000573852 NEU2Q9Y3R4 380 aa20.32■□□□□ 0.84
SCARF1-206ENST00000573852 SORBS3O60504 671 aa20.31■□□□□ 0.84
SCARF1-206ENST00000573852 MTMR1Q13613 665 aa20.31■□□□□ 0.84
SCARF1-206ENST00000573852 MAP4K3Q8IVH8 894 aa20.31■□□□□ 0.84
SCARF1-206ENST00000573852 FITM2Q8N6M3 262 aa20.31■□□□□ 0.84
SCARF1-206ENST00000573852 GRK7Q8WTQ7 553 aa20.31■□□□□ 0.84
SCARF1-206ENST00000573852 CLEC4DQ8WXI8 215 aa20.31■□□□□ 0.84
SCARF1-206ENST00000573852 MFSD14AQ96MC6 490 aa20.31■□□□□ 0.84
SCARF1-206ENST00000573852 TGS1Q96RS0 853 aaKnown RBP20.31■□□□□ 0.84
SCARF1-206ENST00000573852 VEZTQ9HBM0 779 aa20.31■□□□□ 0.84
SCARF1-206ENST00000573852 EXOC7Q9UPT5 735 aa20.31■□□□□ 0.84
SCARF1-206ENST00000573852 NAALADL1Q9UQQ1 740 aa20.31■□□□□ 0.84
SCARF1-206ENST00000573852 MAN1A1P33908 653 aa20.31■□□□□ 0.84
SCARF1-206ENST00000573852 CAP2P40123 477 aa20.31■□□□□ 0.84
SCARF1-206ENST00000573852 COPS2P61201 443 aa20.31■□□□□ 0.84
SCARF1-206ENST00000573852 KIF2BQ8N4N8 673 aa20.31■□□□□ 0.84
SCARF1-206ENST00000573852 MAIP1Q8WWC4 291 aa20.31■□□□□ 0.84
SCARF1-206ENST00000573852 DENND3A2RUS2 1198 aa20.3■□□□□ 0.84
SCARF1-206ENST00000573852 ICAM1P05362 532 aa20.3■□□□□ 0.84
SCARF1-206ENST00000573852 RPSAP08865 295 aaKnown RBP20.3■□□□□ 0.84
SCARF1-206ENST00000573852 RALAP11233 206 aa20.3■□□□□ 0.84
SCARF1-206ENST00000573852 PTGER2P43116 358 aa20.3■□□□□ 0.84
SCARF1-206ENST00000573852 CAV1Q03135 178 aa20.3■□□□□ 0.84
SCARF1-206ENST00000573852 C4orf19Q8IY42 314 aa20.3■□□□□ 0.84
SCARF1-206ENST00000573852 SRRM1Q8IYB3 904 aaKnown RBP20.3■□□□□ 0.84
SCARF1-206ENST00000573852 TMC2Q8TDI7 906 aa20.3■□□□□ 0.84
SCARF1-206ENST00000573852 AGAP11Q8TF27 550 aa20.3■□□□□ 0.84
SCARF1-206ENST00000573852 RMDN2Q96LZ7 410 aa20.3■□□□□ 0.84
SCARF1-206ENST00000573852 LGALS13Q9UHV8 139 aa20.3■□□□□ 0.84
SCARF1-206ENST00000573852 MYPNQ86TC9 1320 aa20.3■□□□□ 0.84
SCARF1-206ENST00000573852 YDJCA8MPS7 323 aa20.3■□□□□ 0.84
SCARF1-206ENST00000573852 SOX10P56693 466 aa20.3■□□□□ 0.84
SCARF1-206ENST00000573852 CYP24A1Q07973 514 aa20.3■□□□□ 0.84
SCARF1-206ENST00000573852 PRUNE1Q86TP1 453 aa20.3■□□□□ 0.84
SCARF1-206ENST00000573852 BSNDQ8WZ55 320 aa20.3■□□□□ 0.84
SCARF1-206ENST00000573852 C9orf72Q96LT7 481 aa20.3■□□□□ 0.84
SCARF1-206ENST00000573852 TIPINQ9BVW5 301 aa20.3■□□□□ 0.84
SCARF1-206ENST00000573852 AVENQ9NQS1 362 aaPredicted RBP20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms