RNA–Protein interactions for RNA: ENST00000572760.5

NPLOC4-209, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best) BASIC

Gene NPLOC4, Length 946 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-209ENST00000572760 CCDC127Q96BQ5 260 aa15.74■□□□□ 0.11
NPLOC4-209ENST00000572760 EEF2KMTQ96G04 330 aa15.74■□□□□ 0.11
NPLOC4-209ENST00000572760 ZMAT2Q96NC0 199 aaKnown RBP15.74■□□□□ 0.11
NPLOC4-209ENST00000572760 SAMD11Q96NU1 681 aa15.74■□□□□ 0.11
NPLOC4-209ENST00000572760 TGS1Q96RS0 853 aaKnown RBP15.74■□□□□ 0.11
NPLOC4-209ENST00000572760 TMEM175Q9BSA9 504 aa15.74■□□□□ 0.11
NPLOC4-209ENST00000572760 CWH43Q9H720 699 aa15.74■□□□□ 0.11
NPLOC4-209ENST00000572760 PDE11AQ9HCR9 933 aa15.74■□□□□ 0.11
NPLOC4-209ENST00000572760 HCSTQ9UBK5 93 aa15.74■□□□□ 0.11
NPLOC4-209ENST00000572760 MTUS1Q9ULD2 1270 aa15.74■□□□□ 0.11
NPLOC4-209ENST00000572760 UBQLN1Q9UMX0 589 aaKnown RBP15.74■□□□□ 0.11
NPLOC4-209ENST00000572760 PLAGL2Q9UPG8 496 aa15.74■□□□□ 0.11
NPLOC4-209ENST00000572760 FAN1Q9Y2M0 1017 aa15.74■□□□□ 0.11
NPLOC4-209ENST00000572760 DERAQ9Y315 318 aa15.74■□□□□ 0.11
NPLOC4-209ENST00000572760 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.74■□□□□ 0.11
NPLOC4-209ENST00000572760 CASTOR2A6NHX0 329 aa15.73■□□□□ 0.11
NPLOC4-209ENST00000572760 DLATP10515 647 aaKnown RBP15.73■□□□□ 0.11
NPLOC4-209ENST00000572760 TNNI1P19237 187 aa15.73■□□□□ 0.11
NPLOC4-209ENST00000572760 BCAR1P56945 870 aa15.73■□□□□ 0.11
NPLOC4-209ENST00000572760 TFAMQ00059 246 aaKnown RBP15.73■□□□□ 0.11
NPLOC4-209ENST00000572760 TAP1Q03518 808 aa15.73■□□□□ 0.11
NPLOC4-209ENST00000572760 PSMD6Q15008 389 aa15.73■□□□□ 0.11
NPLOC4-209ENST00000572760 ZSCAN23Q3MJ62 389 aa15.73■□□□□ 0.11
NPLOC4-209ENST00000572760 CCDC40Q4G0X9 1142 aa15.73■□□□□ 0.11
NPLOC4-209ENST00000572760 HABP4Q5JVS0 413 aaKnown RBP15.73■□□□□ 0.11
NPLOC4-209ENST00000572760 TTI2Q6NXR4 508 aa15.73■□□□□ 0.11
NPLOC4-209ENST00000572760 FOXR2Q6PJQ5 311 aa15.73■□□□□ 0.11
NPLOC4-209ENST00000572760 KCNT2Q6UVM3 1135 aa15.73■□□□□ 0.11
NPLOC4-209ENST00000572760 NT5DC4Q86YG4 428 aa15.73■□□□□ 0.11
NPLOC4-209ENST00000572760 CREBRFQ8IUR6 639 aa15.73■□□□□ 0.11
NPLOC4-209ENST00000572760 COLGALT1Q8NBJ5 622 aa15.73■□□□□ 0.11
NPLOC4-209ENST00000572760 MFSD14AQ96MC6 490 aa15.73■□□□□ 0.11
NPLOC4-209ENST00000572760 CEP63Q96MT8 703 aa15.73■□□□□ 0.11
NPLOC4-209ENST00000572760 PPP1R10Q96QC0 940 aaKnown RBP15.73■□□□□ 0.11
NPLOC4-209ENST00000572760 COLEC11Q9BWP8 271 aa15.73■□□□□ 0.11
NPLOC4-209ENST00000572760 SRRTQ9BXP5 876 aaKnown RBP15.73■□□□□ 0.11
NPLOC4-209ENST00000572760 NAT10Q9H0A0 1025 aaKnown RBP15.73■□□□□ 0.11
NPLOC4-209ENST00000572760 CERS4Q9HA82 394 aa15.73■□□□□ 0.11
NPLOC4-209ENST00000572760 DNAJB4Q9UDY4 337 aa15.73■□□□□ 0.11
NPLOC4-209ENST00000572760 R3HCC1Q9Y3T6 440 aaKnown RBP15.73■□□□□ 0.11
NPLOC4-209ENST00000572760 C2CD2Q9Y426 696 aa15.73■□□□□ 0.11
NPLOC4-209ENST00000572760 SCN1AP35498 2009 aa15.73■□□□□ 0.11
NPLOC4-209ENST00000572760 PLXNA4Q9HCM2 1894 aa15.72■□□□□ 0.11
NPLOC4-209ENST00000572760 MAPK13O15264 365 aa15.72■□□□□ 0.11
NPLOC4-209ENST00000572760 MEFVO15553 781 aaPredicted RBP15.72■□□□□ 0.11
NPLOC4-209ENST00000572760 AKAP3O75969 853 aa15.72■□□□□ 0.11
NPLOC4-209ENST00000572760 TNNC2P02585 160 aa15.72■□□□□ 0.11
NPLOC4-209ENST00000572760 GALTP07902 379 aa15.72■□□□□ 0.11
NPLOC4-209ENST00000572760 NFICP08651 508 aa15.72■□□□□ 0.11
NPLOC4-209ENST00000572760 TMEM191BP0C7N4 346 aa15.72■□□□□ 0.11
NPLOC4-209ENST00000572760 BMPR1AP36894 532 aa15.72■□□□□ 0.11
NPLOC4-209ENST00000572760 INTS8Q75QN2 995 aaKnown RBP15.72■□□□□ 0.11
NPLOC4-209ENST00000572760 FILIP1Q7Z7B0 1213 aa15.72■□□□□ 0.11
NPLOC4-209ENST00000572760 COLGALT2Q8IYK4 626 aa15.72■□□□□ 0.11
NPLOC4-209ENST00000572760 ARNTL2Q8WYA1 636 aa15.72■□□□□ 0.11
NPLOC4-209ENST00000572760 CLP1Q92989 425 aaKnown RBP15.72■□□□□ 0.11
NPLOC4-209ENST00000572760 DDX27Q96GQ7 796 aaKnown RBP15.72■□□□□ 0.11
NPLOC4-209ENST00000572760 ANKRD36BP1Q96IX9 119 aa15.72■□□□□ 0.11
NPLOC4-209ENST00000572760 UROC1Q96N76 676 aa15.72■□□□□ 0.11
NPLOC4-209ENST00000572760 DUSP9Q99956 384 aaKnown RBP15.72■□□□□ 0.11
NPLOC4-209ENST00000572760 C17orf80Q9BSJ5 609 aa15.72■□□□□ 0.11
NPLOC4-209ENST00000572760 MKNK1Q9BUB5 465 aa15.72■□□□□ 0.11
NPLOC4-209ENST00000572760 GZF1Q9H116 711 aaPredicted RBP15.72■□□□□ 0.11
NPLOC4-209ENST00000572760 DNAJC25Q9H1X3 360 aa15.72■□□□□ 0.11
NPLOC4-209ENST00000572760 PRG3Q9Y2Y8 225 aaPredicted RBP15.72■□□□□ 0.11
NPLOC4-209ENST00000572760 NT5C1B-RDH14C9J2C7 533 aa15.71■□□□□ 0.11
NPLOC4-209ENST00000572760 SOX1O00570 391 aaPredicted RBP15.71■□□□□ 0.11
NPLOC4-209ENST00000572760 NRP1O14786 923 aa15.71■□□□□ 0.11
NPLOC4-209ENST00000572760 SLC16A3O15427 465 aaKnown RBP15.71■□□□□ 0.11
NPLOC4-209ENST00000572760 ARHGEF15O94989 841 aa15.71■□□□□ 0.11
NPLOC4-209ENST00000572760 GNA14O95837 355 aa15.71■□□□□ 0.11
NPLOC4-209ENST00000572760 RB1P06400 928 aa15.71■□□□□ 0.11
NPLOC4-209ENST00000572760 CYP3A5P20815 502 aa15.71■□□□□ 0.11
NPLOC4-209ENST00000572760 PPM1AP35813 382 aa15.71■□□□□ 0.11
NPLOC4-209ENST00000572760 PBX3P40426 434 aa15.71■□□□□ 0.11
NPLOC4-209ENST00000572760 SLC11A1P49279 550 aa15.71■□□□□ 0.11
NPLOC4-209ENST00000572760 ERVK-21P61565 698 aa15.71■□□□□ 0.11
NPLOC4-209ENST00000572760 DSC1Q08554 894 aa15.71■□□□□ 0.11
NPLOC4-209ENST00000572760 DUOXA2Q1HG44 320 aa15.71■□□□□ 0.11
NPLOC4-209ENST00000572760 ANO6Q4KMQ2 910 aa15.71■□□□□ 0.11
NPLOC4-209ENST00000572760 ZNF697Q5TEC3 545 aa15.71■□□□□ 0.11
NPLOC4-209ENST00000572760 LMBRD2Q68DH5 695 aaPredicted RBP15.71■□□□□ 0.11
NPLOC4-209ENST00000572760 C11orf57Q6ZUT1 292 aaPredicted RBP15.71■□□□□ 0.11
NPLOC4-209ENST00000572760 EFCAB13Q8IY85 973 aa15.71■□□□□ 0.11
NPLOC4-209ENST00000572760 FBXO22Q8NEZ5 403 aa15.71■□□□□ 0.11
NPLOC4-209ENST00000572760 C18orf25Q96B23 403 aaPredicted RBP15.71■□□□□ 0.11
NPLOC4-209ENST00000572760 TMEM169Q96HH4 297 aa15.71■□□□□ 0.11
NPLOC4-209ENST00000572760 LRCH3Q96II8 777 aa15.71■□□□□ 0.11
NPLOC4-209ENST00000572760 CGRRF1Q99675 332 aa15.71■□□□□ 0.11
NPLOC4-209ENST00000572760 PLVAPQ9BX97 442 aa15.71■□□□□ 0.11
NPLOC4-209ENST00000572760 ZNF576Q9H609 170 aa15.71■□□□□ 0.11
NPLOC4-209ENST00000572760 GOLGA2P5Q9HBQ8 144 aa15.71■□□□□ 0.11
NPLOC4-209ENST00000572760 METTL14Q9HCE5 456 aaKnown RBP15.71■□□□□ 0.11
NPLOC4-209ENST00000572760 DPP3Q9NY33 737 aa15.71■□□□□ 0.11
NPLOC4-209ENST00000572760 SPG21Q9NZD8 308 aa15.71■□□□□ 0.11
NPLOC4-209ENST00000572760 TUBGCP4Q9UGJ1 667 aa15.71■□□□□ 0.11
NPLOC4-209ENST00000572760 TMEM265A0A087WTH1 108 aa15.7■□□□□ 0.1
NPLOC4-209ENST00000572760 TADA2AO75478 443 aa15.7■□□□□ 0.1
NPLOC4-209ENST00000572760 RPL9P32969 192 aaKnown RBP15.7■□□□□ 0.1
NPLOC4-209ENST00000572760 VAMP7P51809 220 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms