RNA–Protein interactions for RNA: ENST00000572351.1

NPLOC4-208, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-208ENST00000572351 KCNE1P15382 129 aa10.23□□□□□ -0.77
NPLOC4-208ENST00000572351 CDK11BP21127 795 aaKnown RBP10.23□□□□□ -0.77
NPLOC4-208ENST00000572351 MTIF2P46199 727 aaKnown RBP10.23□□□□□ -0.77
NPLOC4-208ENST00000572351 AFF1P51825 1210 aaKnown RBP10.23□□□□□ -0.77
NPLOC4-208ENST00000572351 BFSP1Q12934 665 aa10.23□□□□□ -0.77
NPLOC4-208ENST00000572351 BIRC3Q13489 604 aa10.23□□□□□ -0.77
NPLOC4-208ENST00000572351 RAB30Q15771 203 aa10.23□□□□□ -0.77
NPLOC4-208ENST00000572351 JADE1Q6IE81 842 aa10.23□□□□□ -0.77
NPLOC4-208ENST00000572351 FRMD5Q7Z6J6 570 aa10.23□□□□□ -0.77
NPLOC4-208ENST00000572351 NT5DC4Q86YG4 428 aa10.23□□□□□ -0.77
NPLOC4-208ENST00000572351 WDR49Q8IV35 697 aa10.23□□□□□ -0.77
NPLOC4-208ENST00000572351 RNF214Q8ND24 703 aa10.23□□□□□ -0.77
NPLOC4-208ENST00000572351 BEST2Q8NFU1 509 aa10.23□□□□□ -0.77
NPLOC4-208ENST00000572351 CACTINQ8WUQ7 758 aaKnown RBP10.23□□□□□ -0.77
NPLOC4-208ENST00000572351 ANKRD36BP1Q96IX9 119 aa10.23□□□□□ -0.77
NPLOC4-208ENST00000572351 CNOT6LQ96LI5 555 aaKnown RBP10.23□□□□□ -0.77
NPLOC4-208ENST00000572351 MFSD14AQ96MC6 490 aa10.23□□□□□ -0.77
NPLOC4-208ENST00000572351 ZMAT2Q96NC0 199 aaKnown RBP10.23□□□□□ -0.77
NPLOC4-208ENST00000572351 MED15Q96RN5 788 aa10.23□□□□□ -0.77
NPLOC4-208ENST00000572351 TSPAN18Q96SJ8 248 aa10.23□□□□□ -0.77
NPLOC4-208ENST00000572351 CGRRF1Q99675 332 aa10.23□□□□□ -0.77
NPLOC4-208ENST00000572351 MMRN2Q9H8L6 949 aa10.23□□□□□ -0.77
NPLOC4-208ENST00000572351 CBX8Q9HC52 389 aa10.23□□□□□ -0.77
NPLOC4-208ENST00000572351 AAASQ9NRG9 546 aa10.23□□□□□ -0.77
NPLOC4-208ENST00000572351 FANCLQ9NW38 375 aa10.23□□□□□ -0.77
NPLOC4-208ENST00000572351 DERAQ9Y315 318 aa10.23□□□□□ -0.77
NPLOC4-208ENST00000572351 MKI67P46013 3256 aaKnown RBP10.23□□□□□ -0.77
NPLOC4-208ENST00000572351 ALPK3Q96L96 1907 aa10.23□□□□□ -0.77
NPLOC4-208ENST00000572351 LTBP2Q14767 1821 aa10.22□□□□□ -0.77
NPLOC4-208ENST00000572351 CASTOR2A6NHX0 329 aa10.22□□□□□ -0.77
NPLOC4-208ENST00000572351 KCNJ18B7U540 433 aa10.22□□□□□ -0.77
NPLOC4-208ENST00000572351 PES1O00541 588 aaKnown RBP10.22□□□□□ -0.77
NPLOC4-208ENST00000572351 INPPL1O15357 1258 aa10.22□□□□□ -0.77
NPLOC4-208ENST00000572351 MEFVO15553 781 aaPredicted RBP10.22□□□□□ -0.77
NPLOC4-208ENST00000572351 PHACTR2O75167 634 aa10.22□□□□□ -0.77
NPLOC4-208ENST00000572351 KRT19P08727 400 aa10.22□□□□□ -0.77
NPLOC4-208ENST00000572351 TRIM49P0CI25 452 aa10.22□□□□□ -0.77
NPLOC4-208ENST00000572351 TRIM49CP0CI26 452 aa10.22□□□□□ -0.77
NPLOC4-208ENST00000572351 AP3M2P53677 418 aa10.22□□□□□ -0.77
NPLOC4-208ENST00000572351 HTRA4P83105 476 aaPredicted RBP10.22□□□□□ -0.77
NPLOC4-208ENST00000572351 TUSC3Q13454 348 aa10.22□□□□□ -0.77
NPLOC4-208ENST00000572351 KCNJ12Q14500 433 aa10.22□□□□□ -0.77
NPLOC4-208ENST00000572351 DUOXA2Q1HG44 320 aa10.22□□□□□ -0.77
NPLOC4-208ENST00000572351 XKR4Q5GH76 650 aa10.22□□□□□ -0.77
NPLOC4-208ENST00000572351 LMBRD2Q68DH5 695 aaPredicted RBP10.22□□□□□ -0.77
NPLOC4-208ENST00000572351 FAM109BQ6ICB4 259 aaPredicted RBP10.22□□□□□ -0.77
NPLOC4-208ENST00000572351 ALKAL1Q6UXT8 129 aa10.22□□□□□ -0.77
NPLOC4-208ENST00000572351 LUZP1Q86V48 1076 aa10.22□□□□□ -0.77
NPLOC4-208ENST00000572351 DHX40Q8IX18 779 aaKnown RBP10.22□□□□□ -0.77
NPLOC4-208ENST00000572351 GSTCDQ8NEC7 633 aa10.22□□□□□ -0.77
NPLOC4-208ENST00000572351 TMC2Q8TDI7 906 aa10.22□□□□□ -0.77
NPLOC4-208ENST00000572351 PARD3BQ8TEW8 1205 aa10.22□□□□□ -0.77
NPLOC4-208ENST00000572351 C18orf25Q96B23 403 aaPredicted RBP10.22□□□□□ -0.77
NPLOC4-208ENST00000572351 ZNF689Q96CS4 500 aaPredicted RBP10.22□□□□□ -0.77
NPLOC4-208ENST00000572351 PPP1R10Q96QC0 940 aaKnown RBP10.22□□□□□ -0.77
NPLOC4-208ENST00000572351 POP1Q99575 1024 aaKnown RBP10.22□□□□□ -0.77
NPLOC4-208ENST00000572351 MTMR12Q9C0I1 747 aa10.22□□□□□ -0.77
NPLOC4-208ENST00000572351 CXCL16Q9H2A7 254 aa10.22□□□□□ -0.77
NPLOC4-208ENST00000572351 SAMSN1Q9NSI8 373 aaKnown RBP10.22□□□□□ -0.77
NPLOC4-208ENST00000572351 INTS13Q9NVM9 706 aa10.22□□□□□ -0.77
NPLOC4-208ENST00000572351 MIOSQ9NXC5 875 aa10.22□□□□□ -0.77
NPLOC4-208ENST00000572351 TUBGCP4Q9UGJ1 667 aa10.22□□□□□ -0.77
NPLOC4-208ENST00000572351 PLAGL2Q9UPG8 496 aa10.22□□□□□ -0.77
NPLOC4-208ENST00000572351 COLQQ9Y215 455 aaPredicted RBP10.22□□□□□ -0.77
NPLOC4-208ENST00000572351 PCDHA11Q9Y5I1 949 aa10.22□□□□□ -0.77
NPLOC4-208ENST00000572351 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.22□□□□□ -0.77
NPLOC4-208ENST00000572351 MRPL42Q9Y6G3 142 aaKnown RBP10.22□□□□□ -0.77
NPLOC4-208ENST00000572351 TRIP12Q14669 1992 aaPredicted RBP10.22□□□□□ -0.77
NPLOC4-208ENST00000572351 A0A1W2PPC1 479 aa10.21□□□□□ -0.77
NPLOC4-208ENST00000572351 LCHNA4D1U4 455 aa10.21□□□□□ -0.77
NPLOC4-208ENST00000572351 LRRIQ3A6PVS8 624 aaPredicted RBP10.21□□□□□ -0.77
NPLOC4-208ENST00000572351 ALDH2P05091 517 aa10.21□□□□□ -0.77
NPLOC4-208ENST00000572351 CA3P07451 260 aa10.21□□□□□ -0.77
NPLOC4-208ENST00000572351 PRKCSHP14314 528 aaPredicted RBP10.21□□□□□ -0.77
NPLOC4-208ENST00000572351 MYOGP15173 224 aa10.21□□□□□ -0.77
NPLOC4-208ENST00000572351 LAG3P18627 525 aa10.21□□□□□ -0.77
NPLOC4-208ENST00000572351 CYP3A5P20815 502 aa10.21□□□□□ -0.77
NPLOC4-208ENST00000572351 EEF1GP26641 437 aaKnown RBP10.21□□□□□ -0.77
NPLOC4-208ENST00000572351 OR1G1P47890 313 aa10.21□□□□□ -0.77
NPLOC4-208ENST00000572351 GCLMP48507 274 aa10.21□□□□□ -0.77
NPLOC4-208ENST00000572351 ALDH7A1P49419 539 aaKnown RBP10.21□□□□□ -0.77
NPLOC4-208ENST00000572351 WNT7BP56706 349 aa10.21□□□□□ -0.77
NPLOC4-208ENST00000572351 DLG4P78352 724 aa10.21□□□□□ -0.77
NPLOC4-208ENST00000572351 ENPEPQ07075 957 aa10.21□□□□□ -0.77
NPLOC4-208ENST00000572351 CETN1Q12798 172 aa10.21□□□□□ -0.77
NPLOC4-208ENST00000572351 TRPC3Q13507 836 aa10.21□□□□□ -0.77
NPLOC4-208ENST00000572351 ZNF280BQ86YH2 543 aa10.21□□□□□ -0.77
NPLOC4-208ENST00000572351 EFCAB13Q8IY85 973 aa10.21□□□□□ -0.77
NPLOC4-208ENST00000572351 PIP4P2Q8N4L2 257 aa10.21□□□□□ -0.77
NPLOC4-208ENST00000572351 SPOCK2Q92563 424 aa10.21□□□□□ -0.77
NPLOC4-208ENST00000572351 DDX27Q96GQ7 796 aaKnown RBP10.21□□□□□ -0.77
NPLOC4-208ENST00000572351 UROC1Q96N76 676 aa10.21□□□□□ -0.77
NPLOC4-208ENST00000572351 ZNF558Q96NG5 402 aa10.21□□□□□ -0.77
NPLOC4-208ENST00000572351 TMEM175Q9BSA9 504 aa10.21□□□□□ -0.77
NPLOC4-208ENST00000572351 PBX4Q9BYU1 374 aa10.21□□□□□ -0.77
NPLOC4-208ENST00000572351 PRO3102Q9H379 93 aa10.21□□□□□ -0.77
NPLOC4-208ENST00000572351 RC3H2Q9HBD1 1191 aaKnown RBP10.21□□□□□ -0.77
NPLOC4-208ENST00000572351 DPP3Q9NY33 737 aa10.21□□□□□ -0.77
NPLOC4-208ENST00000572351 PRG3Q9Y2Y8 225 aaPredicted RBP10.21□□□□□ -0.77
NPLOC4-208ENST00000572351 SIP14410 1827 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms