RNA–Protein interactions for RNA: ENST00000570668.1

SMG6-206, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-206ENST00000570668 PPFIBP1Q86W92 1011 aa12.16□□□□□ -0.46
SMG6-206ENST00000570668 CCDC65Q8IXS2 484 aa12.16□□□□□ -0.46
SMG6-206ENST00000570668 TMEM87AQ8NBN3 555 aa12.16□□□□□ -0.46
SMG6-206ENST00000570668 SLC22A17Q8WUG5 538 aa12.16□□□□□ -0.46
SMG6-206ENST00000570668 CASP10Q92851 521 aa12.16□□□□□ -0.46
SMG6-206ENST00000570668 DDX27Q96GQ7 796 aaKnown RBP12.16□□□□□ -0.46
SMG6-206ENST00000570668 SPATA32Q96LK8 384 aa12.16□□□□□ -0.46
SMG6-206ENST00000570668 KLHL5Q96PQ7 755 aa12.16□□□□□ -0.46
SMG6-206ENST00000570668 PYM1Q9BRP8 204 aaKnown RBP12.16□□□□□ -0.46
SMG6-206ENST00000570668 EMILIN2Q9BXX0 1053 aa12.16□□□□□ -0.46
SMG6-206ENST00000570668 RXFP1Q9HBX9 757 aa12.16□□□□□ -0.46
SMG6-206ENST00000570668 PCDHB13Q9Y5F0 798 aa12.16□□□□□ -0.46
SMG6-206ENST00000570668 STYXL1Q9Y6J8 313 aa12.16□□□□□ -0.46
SMG6-206ENST00000570668 TTC26A0AVF1 554 aa12.15□□□□□ -0.46
SMG6-206ENST00000570668 ANKRD63C9JTQ0 380 aa12.15□□□□□ -0.46
SMG6-206ENST00000570668 TNFRSF10AO00220 468 aa12.15□□□□□ -0.46
SMG6-206ENST00000570668 C2CD2LO14523 706 aa12.15□□□□□ -0.46
SMG6-206ENST00000570668 B3GAT3O94766 335 aa12.15□□□□□ -0.46
SMG6-206ENST00000570668 ADRB2P07550 413 aa12.15□□□□□ -0.46
SMG6-206ENST00000570668 CXCL8P10145 99 aa12.15□□□□□ -0.46
SMG6-206ENST00000570668 CMA1P23946 247 aa12.15□□□□□ -0.46
SMG6-206ENST00000570668 CLCNKBP51801 687 aa12.15□□□□□ -0.46
SMG6-206ENST00000570668 CASP5P51878 434 aa12.15□□□□□ -0.46
SMG6-206ENST00000570668 ELAVL2Q12926 359 aaKnown RBP12.15□□□□□ -0.46
SMG6-206ENST00000570668 ALCAMQ13740 583 aa12.15□□□□□ -0.46
SMG6-206ENST00000570668 UPP1Q16831 310 aa12.15□□□□□ -0.46
SMG6-206ENST00000570668 SLFN12LQ6IEE8 588 aa12.15□□□□□ -0.46
SMG6-206ENST00000570668 LLGL2Q6P1M3 1020 aa12.15□□□□□ -0.46
SMG6-206ENST00000570668 SYCE2Q6PIF2 218 aa12.15□□□□□ -0.46
SMG6-206ENST00000570668 HASPINQ8TF76 798 aa12.15□□□□□ -0.46
SMG6-206ENST00000570668 C7orf25Q9BPX7 421 aa12.15□□□□□ -0.46
SMG6-206ENST00000570668 MSTO1Q9BUK6 570 aa12.15□□□□□ -0.46
SMG6-206ENST00000570668 SCAND2PQ9GZW5 306 aaPredicted RBP12.15□□□□□ -0.46
SMG6-206ENST00000570668 S1PR5Q9H228 398 aa12.15□□□□□ -0.46
SMG6-206ENST00000570668 GOLGA2P5Q9HBQ8 144 aa12.15□□□□□ -0.46
SMG6-206ENST00000570668 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.15□□□□□ -0.46
SMG6-206ENST00000570668 TBC1D7Q9P0N9 293 aa12.15□□□□□ -0.46
SMG6-206ENST00000570668 PRKAG3Q9UGI9 489 aa12.15□□□□□ -0.46
SMG6-206ENST00000570668 KCNH3Q9ULD8 1083 aa12.15□□□□□ -0.46
SMG6-206ENST00000570668 EXOC7Q9UPT5 735 aa12.15□□□□□ -0.46
SMG6-206ENST00000570668 TISP43B9A030 160 aa12.14□□□□□ -0.47
SMG6-206ENST00000570668 TEX28O15482 410 aa12.14□□□□□ -0.47
SMG6-206ENST00000570668 GCNT3O95395 438 aa12.14□□□□□ -0.47
SMG6-206ENST00000570668 C1RP00736 705 aa12.14□□□□□ -0.47
SMG6-206ENST00000570668 ADH1AP07327 375 aa12.14□□□□□ -0.47
SMG6-206ENST00000570668 MYBP10242 640 aa12.14□□□□□ -0.47
SMG6-206ENST00000570668 EPCAMP16422 314 aa12.14□□□□□ -0.47
SMG6-206ENST00000570668 IGFBP6P24592 240 aaPredicted RBP12.14□□□□□ -0.47
SMG6-206ENST00000570668 KLRC2P26717 231 aa12.14□□□□□ -0.47
SMG6-206ENST00000570668 RPL9P32969 192 aaKnown RBP12.14□□□□□ -0.47
SMG6-206ENST00000570668 TNFSF9P41273 254 aa12.14□□□□□ -0.47
SMG6-206ENST00000570668 CLCN4P51793 760 aa12.14□□□□□ -0.47
SMG6-206ENST00000570668 NUCB2P80303 420 aa12.14□□□□□ -0.47
SMG6-206ENST00000570668 POU5F1Q01860 360 aaKnown RBP12.14□□□□□ -0.47
SMG6-206ENST00000570668 KCNA1Q09470 495 aa12.14□□□□□ -0.47
SMG6-206ENST00000570668 POSTNQ15063 836 aa12.14□□□□□ -0.47
SMG6-206ENST00000570668 ZBTB6Q15916 424 aa12.14□□□□□ -0.47
SMG6-206ENST00000570668 ENOX2Q16206 610 aaKnown RBP12.14□□□□□ -0.47
SMG6-206ENST00000570668 TPRNQ4KMQ1 711 aa12.14□□□□□ -0.47
SMG6-206ENST00000570668 ZBTB41Q5SVQ8 909 aa12.14□□□□□ -0.47
SMG6-206ENST00000570668 L1TD1Q5T7N2 865 aaKnown RBP12.14□□□□□ -0.47
SMG6-206ENST00000570668 FAM171A1Q5VUB5 890 aa12.14□□□□□ -0.47
SMG6-206ENST00000570668 CD300LGQ6UXG3 332 aa12.14□□□□□ -0.47
SMG6-206ENST00000570668 C3orf58Q8NDZ4 430 aa12.14□□□□□ -0.47
SMG6-206ENST00000570668 SUSD6Q92537 303 aa12.14□□□□□ -0.47
SMG6-206ENST00000570668 B3GALT6Q96L58 329 aa12.14□□□□□ -0.47
SMG6-206ENST00000570668 ACCSQ96QU6 501 aa12.14□□□□□ -0.47
SMG6-206ENST00000570668 TSPAN18Q96SJ8 248 aa12.14□□□□□ -0.47
SMG6-206ENST00000570668 TTPALQ9BTX7 342 aa12.14□□□□□ -0.47
SMG6-206ENST00000570668 FGFBP2Q9BYJ0 223 aa12.14□□□□□ -0.47
SMG6-206ENST00000570668 RPF1Q9H9Y2 349 aaKnown RBP12.14□□□□□ -0.47
SMG6-206ENST00000570668 DZANK1Q9NVP4 752 aa12.14□□□□□ -0.47
SMG6-206ENST00000570668 FNIP2Q9P278 1114 aa12.14□□□□□ -0.47
SMG6-206ENST00000570668 CPSF3Q9UKF6 684 aaKnown RBP12.14□□□□□ -0.47
SMG6-206ENST00000570668 HPSEQ9Y251 543 aa12.14□□□□□ -0.47
SMG6-206ENST00000570668 USP15Q9Y4E8 981 aaPredicted RBP12.14□□□□□ -0.47
SMG6-206ENST00000570668 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.14□□□□□ -0.47
SMG6-206ENST00000570668 PDCD11Q14690 1871 aaKnown RBP12.14□□□□□ -0.47
SMG6-206ENST00000570668 FAM237AA0A1B0GTK4 181 aa12.13□□□□□ -0.47
SMG6-206ENST00000570668 PODXLO00592 558 aa12.13□□□□□ -0.47
SMG6-206ENST00000570668 TRAPPC3O43617 180 aa12.13□□□□□ -0.47
SMG6-206ENST00000570668 ACTN4O43707 911 aaKnown RBP12.13□□□□□ -0.47
SMG6-206ENST00000570668 SLFN14P0C7P3 912 aa12.13□□□□□ -0.47
SMG6-206ENST00000570668 FGFR3P22607 806 aa12.13□□□□□ -0.47
SMG6-206ENST00000570668 ADSSP30520 456 aa12.13□□□□□ -0.47
SMG6-206ENST00000570668 ASIC1P78348 528 aa12.13□□□□□ -0.47
SMG6-206ENST00000570668 CREMQ03060 361 aa12.13□□□□□ -0.47
SMG6-206ENST00000570668 ZP2Q05996 745 aa12.13□□□□□ -0.47
SMG6-206ENST00000570668 PPP2R3AQ06190 1150 aa12.13□□□□□ -0.47
SMG6-206ENST00000570668 EHHADHQ08426 723 aa12.13□□□□□ -0.47
SMG6-206ENST00000570668 RTP2Q5QGT7 225 aa12.13□□□□□ -0.47
SMG6-206ENST00000570668 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.13□□□□□ -0.47
SMG6-206ENST00000570668 UNC13DQ70J99 1090 aa12.13□□□□□ -0.47
SMG6-206ENST00000570668 ADHFE1Q8IWW8 467 aa12.13□□□□□ -0.47
SMG6-206ENST00000570668 CD302Q8IX05 232 aa12.13□□□□□ -0.47
SMG6-206ENST00000570668 GJD3Q8N144 294 aa12.13□□□□□ -0.47
SMG6-206ENST00000570668 RIN2Q8WYP3 895 aaPredicted RBP12.13□□□□□ -0.47
SMG6-206ENST00000570668 PIK3R5Q8WYR1 880 aa12.13□□□□□ -0.47
SMG6-206ENST00000570668 C18orf25Q96B23 403 aaPredicted RBP12.13□□□□□ -0.47
SMG6-206ENST00000570668 FBXL18Q96ME1 805 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms