RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 TAB2Q9NYJ8 693 aa7.15□□□□□ -1.26
CTDNEP1-204ENST00000570484 PARP2Q9UGN5 583 aa7.15□□□□□ -1.26
CTDNEP1-204ENST00000570484 LRFN2Q9ULH4 789 aa7.15□□□□□ -1.26
CTDNEP1-204ENST00000570484 R3HCC1Q9Y3T6 440 aaKnown RBP7.15□□□□□ -1.26
CTDNEP1-204ENST00000570484 STYXL1Q9Y6J8 313 aa7.15□□□□□ -1.26
CTDNEP1-204ENST00000570484 XPOTO43592 962 aaKnown RBP7.14□□□□□ -1.27
CTDNEP1-204ENST00000570484 NBNO60934 754 aa7.14□□□□□ -1.27
CTDNEP1-204ENST00000570484 EFCAB14O75071 495 aa7.14□□□□□ -1.27
CTDNEP1-204ENST00000570484 RECQL4O94761 1208 aa7.14□□□□□ -1.27
CTDNEP1-204ENST00000570484 AFPP02771 609 aaKnown RBP7.14□□□□□ -1.27
CTDNEP1-204ENST00000570484 ADRB2P07550 413 aa7.14□□□□□ -1.27
CTDNEP1-204ENST00000570484 TMEM191BP0C7N4 346 aa7.14□□□□□ -1.27
CTDNEP1-204ENST00000570484 STAG3L1P0CL83 205 aa7.14□□□□□ -1.27
CTDNEP1-204ENST00000570484 CXCL8P10145 99 aa7.14□□□□□ -1.27
CTDNEP1-204ENST00000570484 ITGA4P13612 1032 aa7.14□□□□□ -1.27
CTDNEP1-204ENST00000570484 ATP1A3P13637 1013 aa7.14□□□□□ -1.27
CTDNEP1-204ENST00000570484 SIP14410 1827 aa7.14□□□□□ -1.27
CTDNEP1-204ENST00000570484 ZNF18P17022 549 aa7.14□□□□□ -1.27
CTDNEP1-204ENST00000570484 TNNI1P19237 187 aa7.14□□□□□ -1.27
CTDNEP1-204ENST00000570484 MYH9P35579 1960 aaKnown RBP7.14□□□□□ -1.27
CTDNEP1-204ENST00000570484 KCNJ6P48051 423 aa7.14□□□□□ -1.27
CTDNEP1-204ENST00000570484 CASP4P49662 377 aa7.14□□□□□ -1.27
CTDNEP1-204ENST00000570484 ACOT2P49753 483 aa7.14□□□□□ -1.27
CTDNEP1-204ENST00000570484 MXI1P50539 228 aa7.14□□□□□ -1.27
CTDNEP1-204ENST00000570484 MMP16P51512 607 aa7.14□□□□□ -1.27
CTDNEP1-204ENST00000570484 VAMP7P51809 220 aa7.14□□□□□ -1.27
CTDNEP1-204ENST00000570484 COPS2P61201 443 aa7.14□□□□□ -1.27
CTDNEP1-204ENST00000570484 MYL7Q01449 175 aa7.14□□□□□ -1.27
CTDNEP1-204ENST00000570484 FPGSQ05932 587 aa7.14□□□□□ -1.27
CTDNEP1-204ENST00000570484 CYP24A1Q07973 514 aa7.14□□□□□ -1.27
CTDNEP1-204ENST00000570484 BIRC3Q13489 604 aa7.14□□□□□ -1.27
CTDNEP1-204ENST00000570484 MBTPS1Q14703 1052 aa7.14□□□□□ -1.27
CTDNEP1-204ENST00000570484 NCAPHQ15003 741 aa7.14□□□□□ -1.27
CTDNEP1-204ENST00000570484 KRT31Q15323 416 aa7.14□□□□□ -1.27
CTDNEP1-204ENST00000570484 PLEKHG4Q58EX7 1191 aa7.14□□□□□ -1.27
CTDNEP1-204ENST00000570484 CNKSR3Q6P9H4 555 aa7.14□□□□□ -1.27
CTDNEP1-204ENST00000570484 TRAF7Q6Q0C0 670 aa7.14□□□□□ -1.27
CTDNEP1-204ENST00000570484 FRMD5Q7Z6J6 570 aa7.14□□□□□ -1.27
CTDNEP1-204ENST00000570484 BRSK2Q8IWQ3 736 aa7.14□□□□□ -1.27
CTDNEP1-204ENST00000570484 CD302Q8IX05 232 aa7.14□□□□□ -1.27
CTDNEP1-204ENST00000570484 RPUSD2Q8IZ73 545 aaKnown RBP7.14□□□□□ -1.27
CTDNEP1-204ENST00000570484 ABI1Q8IZP0 508 aa7.14□□□□□ -1.27
CTDNEP1-204ENST00000570484 CCDC150Q8NCX0 1101 aa7.14□□□□□ -1.27
CTDNEP1-204ENST00000570484 DBF4BQ8NFT6 615 aa7.14□□□□□ -1.27
CTDNEP1-204ENST00000570484 TMEM174Q8WUU8 243 aa7.14□□□□□ -1.27
CTDNEP1-204ENST00000570484 ZNF516Q92618 1163 aa7.14□□□□□ -1.27
CTDNEP1-204ENST00000570484 ANKRD36BP1Q96IX9 119 aa7.14□□□□□ -1.27
CTDNEP1-204ENST00000570484 TUBGCP2Q9BSJ2 902 aa7.14□□□□□ -1.27
CTDNEP1-204ENST00000570484 EIF2AQ9BY44 585 aaKnown RBP7.14□□□□□ -1.27
CTDNEP1-204ENST00000570484 IMPG2Q9BZV3 1241 aa7.14□□□□□ -1.27
CTDNEP1-204ENST00000570484 TRIM5Q9C035 493 aa7.14□□□□□ -1.27
CTDNEP1-204ENST00000570484 MTIF3Q9H2K0 278 aaKnown RBP7.14□□□□□ -1.27
CTDNEP1-204ENST00000570484 AGO3Q9H9G7 860 aaKnown RBP7.14□□□□□ -1.27
CTDNEP1-204ENST00000570484 PTPRHQ9HD43 1115 aa7.14□□□□□ -1.27
CTDNEP1-204ENST00000570484 DMAC2Q9NW81 257 aa7.14□□□□□ -1.27
CTDNEP1-204ENST00000570484 IPPQ9Y573 584 aa7.14□□□□□ -1.27
CTDNEP1-204ENST00000570484 PCDHB2Q9Y5E7 798 aa7.14□□□□□ -1.27
CTDNEP1-204ENST00000570484 NR2E3Q9Y5X4 410 aa7.14□□□□□ -1.27
CTDNEP1-204ENST00000570484 TANC1Q9C0D5 1861 aa7.13□□□□□ -1.27
CTDNEP1-204ENST00000570484 TRIM43BA6NCK2 446 aa7.13□□□□□ -1.27
CTDNEP1-204ENST00000570484 ZBBXA8MT70 800 aa7.13□□□□□ -1.27
CTDNEP1-204ENST00000570484 LGALS16A8MUM7 142 aa7.13□□□□□ -1.27
CTDNEP1-204ENST00000570484 ABLIM1O14639 778 aa7.13□□□□□ -1.27
CTDNEP1-204ENST00000570484 PHACTR2O75167 634 aa7.13□□□□□ -1.27
CTDNEP1-204ENST00000570484 BAIAP3O94812 1187 aa7.13□□□□□ -1.27
CTDNEP1-204ENST00000570484 TNNC2P02585 160 aa7.13□□□□□ -1.27
CTDNEP1-204ENST00000570484 CXCL10P02778 98 aa7.13□□□□□ -1.27
CTDNEP1-204ENST00000570484 AMHP03971 560 aa7.13□□□□□ -1.27
CTDNEP1-204ENST00000570484 TRIM49P0CI25 452 aa7.13□□□□□ -1.27
CTDNEP1-204ENST00000570484 TRIM49CP0CI26 452 aa7.13□□□□□ -1.27
CTDNEP1-204ENST00000570484 CSF2RAP15509 400 aa7.13□□□□□ -1.27
CTDNEP1-204ENST00000570484 HOXA11P31270 313 aaPredicted RBP7.13□□□□□ -1.27
CTDNEP1-204ENST00000570484 TNFSF9P41273 254 aa7.13□□□□□ -1.27
CTDNEP1-204ENST00000570484 PIK3CAP42336 1068 aa7.13□□□□□ -1.27
CTDNEP1-204ENST00000570484 COPB1P53618 953 aaKnown RBP7.13□□□□□ -1.27
CTDNEP1-204ENST00000570484 AP3M2P53677 418 aa7.13□□□□□ -1.27
CTDNEP1-204ENST00000570484 MARSP56192 900 aaKnown RBP7.13□□□□□ -1.27
CTDNEP1-204ENST00000570484 UBASH3AP57075 661 aa7.13□□□□□ -1.27
CTDNEP1-204ENST00000570484 TFAMQ00059 246 aaKnown RBP7.13□□□□□ -1.27
CTDNEP1-204ENST00000570484 FANCCQ00597 558 aa7.13□□□□□ -1.27
CTDNEP1-204ENST00000570484 POU5F1Q01860 360 aaKnown RBP7.13□□□□□ -1.27
CTDNEP1-204ENST00000570484 IKBKEQ14164 716 aa7.13□□□□□ -1.27
CTDNEP1-204ENST00000570484 TMEM132DQ14C87 1099 aa7.13□□□□□ -1.27
CTDNEP1-204ENST00000570484 PSMD6Q15008 389 aa7.13□□□□□ -1.27
CTDNEP1-204ENST00000570484 SEZ6Q53EL9 994 aa7.13□□□□□ -1.27
CTDNEP1-204ENST00000570484 MFSD5Q6N075 450 aa7.13□□□□□ -1.27
CTDNEP1-204ENST00000570484 PSRC1Q6PGN9 363 aaPredicted RBP7.13□□□□□ -1.27
CTDNEP1-204ENST00000570484 SARM1Q6SZW1 724 aa7.13□□□□□ -1.27
CTDNEP1-204ENST00000570484 GLB1LQ6UWU2 654 aa7.13□□□□□ -1.27
CTDNEP1-204ENST00000570484 SLC24A5Q71RS6 500 aa7.13□□□□□ -1.27
CTDNEP1-204ENST00000570484 WDR49Q8IV35 697 aa7.13□□□□□ -1.27
CTDNEP1-204ENST00000570484 CEP120Q8N960 986 aa7.13□□□□□ -1.27
CTDNEP1-204ENST00000570484 PRR7Q8TB68 274 aa7.13□□□□□ -1.27
CTDNEP1-204ENST00000570484 URGCPQ8TCY9 931 aa7.13□□□□□ -1.27
CTDNEP1-204ENST00000570484 TRIM43Q96BQ3 446 aaPredicted RBP7.13□□□□□ -1.27
CTDNEP1-204ENST00000570484 SNX27Q96L92 541 aa7.13□□□□□ -1.27
CTDNEP1-204ENST00000570484 FBXL18Q96ME1 805 aa7.13□□□□□ -1.27
CTDNEP1-204ENST00000570484 MED15Q96RN5 788 aa7.13□□□□□ -1.27
CTDNEP1-204ENST00000570484 SPSB2Q99619 263 aa7.13□□□□□ -1.27
CTDNEP1-204ENST00000570484 CGRRF1Q99675 332 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms