RNA–Protein interactions for RNA: ENST00000569891.5

CYLD-216, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 1 (best)

Gene CYLD, Length 4,665 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-216ENST00000569891 CEP128Q6ZU80 1094 aa6.47□□□□□ -1.37
CYLD-216ENST00000569891 PCSK9Q8NBP7 692 aaKnown RBP6.47□□□□□ -1.37
CYLD-216ENST00000569891 BEST2Q8NFU1 509 aa6.47□□□□□ -1.37
CYLD-216ENST00000569891 ACAP3Q96P50 834 aa6.47□□□□□ -1.37
CYLD-216ENST00000569891 ACO2Q99798 780 aaKnown RBP6.47□□□□□ -1.37
CYLD-216ENST00000569891 FEZ2Q9UHY8 353 aaPredicted RBP6.47□□□□□ -1.37
CYLD-216ENST00000569891 CPA4Q9UI42 421 aa6.47□□□□□ -1.37
CYLD-216ENST00000569891 TARSL2A2RTX5 802 aaKnown RBP6.47□□□□□ -1.37
CYLD-216ENST00000569891 LRRIQ3A6PVS8 624 aaPredicted RBP6.47□□□□□ -1.37
CYLD-216ENST00000569891 THAP12O43422 761 aa6.47□□□□□ -1.37
CYLD-216ENST00000569891 RARBP10826 455 aa6.47□□□□□ -1.37
CYLD-216ENST00000569891 SKIP12755 728 aa6.47□□□□□ -1.37
CYLD-216ENST00000569891 MAN1A1P33908 653 aa6.47□□□□□ -1.37
CYLD-216ENST00000569891 ARHGAP25P42331 645 aa6.47□□□□□ -1.37
CYLD-216ENST00000569891 CYP27A1Q02318 531 aa6.47□□□□□ -1.37
CYLD-216ENST00000569891 NCOA4Q13772 614 aa6.47□□□□□ -1.37
CYLD-216ENST00000569891 HSDL1Q3SXM5 330 aa6.47□□□□□ -1.37
CYLD-216ENST00000569891 SV2AQ7L0J3 742 aa6.47□□□□□ -1.37
CYLD-216ENST00000569891 TLK2Q86UE8 772 aa6.47□□□□□ -1.37
CYLD-216ENST00000569891 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.47□□□□□ -1.37
CYLD-216ENST00000569891 ZNF560Q96MR9 790 aa6.47□□□□□ -1.37
CYLD-216ENST00000569891 MTG1Q9BT17 334 aaPredicted RBP6.47□□□□□ -1.37
CYLD-216ENST00000569891 NIF3L1Q9GZT8 377 aa6.47□□□□□ -1.37
CYLD-216ENST00000569891 SNX12Q9UMY4 172 aa6.47□□□□□ -1.37
CYLD-216ENST00000569891 CNTNAP2Q9UHC6 1331 aa6.47□□□□□ -1.37
CYLD-216ENST00000569891 C17orf102A2RUQ5 167 aa6.47□□□□□ -1.37
CYLD-216ENST00000569891 CCDC151A5D8V7 595 aa6.47□□□□□ -1.37
CYLD-216ENST00000569891 ANKRD63C9JTQ0 380 aa6.47□□□□□ -1.37
CYLD-216ENST00000569891 LSM8O95777 96 aaKnown RBP6.47□□□□□ -1.37
CYLD-216ENST00000569891 CD4P01730 458 aa6.47□□□□□ -1.37
CYLD-216ENST00000569891 MYL3P08590 195 aa6.47□□□□□ -1.37
CYLD-216ENST00000569891 PNPLA4P41247 253 aa6.47□□□□□ -1.37
CYLD-216ENST00000569891 SLC1A1P43005 524 aa6.47□□□□□ -1.37
CYLD-216ENST00000569891 SLC8A3P57103 927 aa6.47□□□□□ -1.37
CYLD-216ENST00000569891 CDR2Q01850 454 aa6.47□□□□□ -1.37
CYLD-216ENST00000569891 FSTL1Q12841 308 aa6.47□□□□□ -1.37
CYLD-216ENST00000569891 ZNF699Q32M78 642 aa6.47□□□□□ -1.37
CYLD-216ENST00000569891 KSR1Q8IVT5 923 aa6.47□□□□□ -1.37
CYLD-216ENST00000569891 SHC3Q92529 594 aa6.47□□□□□ -1.37
CYLD-216ENST00000569891 FZD8Q9H461 694 aa6.47□□□□□ -1.37
CYLD-216ENST00000569891 POLD4Q9HCU8 107 aa6.47□□□□□ -1.37
CYLD-216ENST00000569891 B4GALT4O60513 344 aa6.46□□□□□ -1.37
CYLD-216ENST00000569891 DUSP11O75319 330 aaKnown RBP6.46□□□□□ -1.37
CYLD-216ENST00000569891 ACTN1P12814 892 aa6.46□□□□□ -1.37
CYLD-216ENST00000569891 HOXD8P13378 290 aaPredicted RBP6.46□□□□□ -1.37
CYLD-216ENST00000569891 ADCYAP1R1P41586 468 aa6.46□□□□□ -1.37
CYLD-216ENST00000569891 RBP5P82980 135 aa6.46□□□□□ -1.37
CYLD-216ENST00000569891 TAPT1Q6NXT6 567 aa6.46□□□□□ -1.37
CYLD-216ENST00000569891 MTHFD1LQ6UB35 978 aa6.46□□□□□ -1.37
CYLD-216ENST00000569891 MAATS1Q7Z4T9 603 aa6.46□□□□□ -1.37
CYLD-216ENST00000569891 IRF2BP2Q7Z5L9 587 aa6.46□□□□□ -1.37
CYLD-216ENST00000569891 DAAM2Q86T65 1068 aa6.46□□□□□ -1.37
CYLD-216ENST00000569891 FAM71AQ8IYT1 594 aa6.46□□□□□ -1.37
CYLD-216ENST00000569891 TMEM35BQ8NCS4 154 aa6.46□□□□□ -1.37
CYLD-216ENST00000569891 IPO4Q8TEX9 1081 aaKnown RBP6.46□□□□□ -1.37
CYLD-216ENST00000569891 RUFY1Q96T51 708 aa6.46□□□□□ -1.37
CYLD-216ENST00000569891 IFT122Q9HBG6 1241 aa6.46□□□□□ -1.37
CYLD-216ENST00000569891 HOMER3Q9NSC5 361 aa6.46□□□□□ -1.37
CYLD-216ENST00000569891 WDR35Q9P2L0 1181 aa6.46□□□□□ -1.37
CYLD-216ENST00000569891 PUF60Q9UHX1 559 aaKnown RBP6.46□□□□□ -1.37
CYLD-216ENST00000569891 GTF3C4Q9UKN8 822 aa6.46□□□□□ -1.37
CYLD-216ENST00000569891 ITGA11Q9UKX5 1188 aa6.46□□□□□ -1.37
CYLD-216ENST00000569891 C22orf31O95567 290 aa6.46□□□□□ -1.38
CYLD-216ENST00000569891 CYP2C9P11712 490 aa6.46□□□□□ -1.38
CYLD-216ENST00000569891 PSEN2P49810 448 aa6.46□□□□□ -1.38
CYLD-216ENST00000569891 NOP14P78316 857 aaKnown RBP6.46□□□□□ -1.38
CYLD-216ENST00000569891 CLDN10P78369 228 aa6.46□□□□□ -1.38
CYLD-216ENST00000569891 LACTBP83111 547 aaPredicted RBP6.46□□□□□ -1.38
CYLD-216ENST00000569891 TFAMQ00059 246 aaKnown RBP6.46□□□□□ -1.38
CYLD-216ENST00000569891 CUL2Q13617 745 aa6.46□□□□□ -1.38
CYLD-216ENST00000569891 MFSD10Q14728 455 aa6.46□□□□□ -1.38
CYLD-216ENST00000569891 CBWD6Q4V339 395 aa6.46□□□□□ -1.38
CYLD-216ENST00000569891 CBWD3Q5JTY5 395 aa6.46□□□□□ -1.38
CYLD-216ENST00000569891 CBWD5Q5RIA9 395 aa6.46□□□□□ -1.38
CYLD-216ENST00000569891 MORN1Q5T089 497 aa6.46□□□□□ -1.38
CYLD-216ENST00000569891 HGSNATQ68CP4 663 aa6.46□□□□□ -1.38
CYLD-216ENST00000569891 BSNDQ8WZ55 320 aa6.46□□□□□ -1.38
CYLD-216ENST00000569891 WDR24Q96S15 920 aa6.46□□□□□ -1.38
CYLD-216ENST00000569891 PCYT2Q99447 389 aa6.46□□□□□ -1.38
CYLD-216ENST00000569891 KIFC3Q9BVG8 833 aa6.46□□□□□ -1.38
CYLD-216ENST00000569891 WNT8AQ9H1J5 351 aa6.46□□□□□ -1.38
CYLD-216ENST00000569891 C2CD2Q9Y426 696 aa6.46□□□□□ -1.38
CYLD-216ENST00000569891 PCDHGC5Q9Y5F6 944 aa6.46□□□□□ -1.38
CYLD-216ENST00000569891 NCANO14594 1321 aa6.46□□□□□ -1.38
CYLD-216ENST00000569891 A6NJR5 290 aa6.46□□□□□ -1.38
CYLD-216ENST00000569891 LRRN2O75325 713 aa6.46□□□□□ -1.38
CYLD-216ENST00000569891 TADA3O75528 432 aa6.46□□□□□ -1.38
CYLD-216ENST00000569891 HADHBP55084 474 aaKnown RBP6.46□□□□□ -1.38
CYLD-216ENST00000569891 ASTE1Q2TB18 679 aaPredicted RBP6.46□□□□□ -1.38
CYLD-216ENST00000569891 NFRKBQ6P4R8 1299 aa6.46□□□□□ -1.38
CYLD-216ENST00000569891 ZBTB33Q86T24 672 aa6.46□□□□□ -1.38
CYLD-216ENST00000569891 IFT20Q8IY31 132 aa6.46□□□□□ -1.38
CYLD-216ENST00000569891 RPUSD2Q8IZ73 545 aaKnown RBP6.46□□□□□ -1.38
CYLD-216ENST00000569891 RPS6KC1Q96S38 1066 aa6.46□□□□□ -1.38
CYLD-216ENST00000569891 SH2D3AQ9BRG2 576 aa6.46□□□□□ -1.38
CYLD-216ENST00000569891 NOD1Q9Y239 953 aa6.46□□□□□ -1.38
CYLD-216ENST00000569891 ZNF236Q9UL36 1845 aa6.46□□□□□ -1.38
CYLD-216ENST00000569891 DMXL2Q8TDJ6 3036 aa6.46□□□□□ -1.38
CYLD-216ENST00000569891 TMEM150BA6NC51 233 aa6.46□□□□□ -1.38
CYLD-216ENST00000569891 PGRMC1O00264 195 aaKnown RBP6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms