RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 ZNF574Q6ZN55 896 aaPredicted RBP7.48□□□□□ -1.21
HERPUD1-217ENST00000569429 SYT13Q7L8C5 426 aa7.48□□□□□ -1.21
HERPUD1-217ENST00000569429 CCDC60Q8IWA6 550 aaPredicted RBP7.48□□□□□ -1.21
HERPUD1-217ENST00000569429 PLEKHM2Q8IWE5 1019 aa7.48□□□□□ -1.21
HERPUD1-217ENST00000569429 SMARCC2Q8TAQ2 1214 aa7.48□□□□□ -1.21
HERPUD1-217ENST00000569429 LNX1Q8TBB1 728 aaPredicted RBP7.48□□□□□ -1.21
HERPUD1-217ENST00000569429 ZNF668Q96K58 619 aaPredicted RBP7.48□□□□□ -1.21
HERPUD1-217ENST00000569429 TMEM209Q96SK2 561 aa7.48□□□□□ -1.21
HERPUD1-217ENST00000569429 SDF4Q9BRK5 362 aa7.48□□□□□ -1.21
HERPUD1-217ENST00000569429 ZKSCAN3Q9BRR0 538 aa7.48□□□□□ -1.21
HERPUD1-217ENST00000569429 BCL11AQ9H165 835 aa7.48□□□□□ -1.21
HERPUD1-217ENST00000569429 RIOX1Q9H6W3 641 aa7.48□□□□□ -1.21
HERPUD1-217ENST00000569429 TMEM74BQ9NUR3 256 aa7.48□□□□□ -1.21
HERPUD1-217ENST00000569429 SLC6A14Q9UN76 642 aa7.48□□□□□ -1.21
HERPUD1-217ENST00000569429 PIN4Q9Y237 131 aaKnown RBP7.48□□□□□ -1.21
HERPUD1-217ENST00000569429 PCDHB2Q9Y5E7 798 aa7.48□□□□□ -1.21
HERPUD1-217ENST00000569429 ZMYM6O95789 1325 aa7.48□□□□□ -1.21
HERPUD1-217ENST00000569429 MED13Q9UHV7 2174 aa7.47□□□□□ -1.21
HERPUD1-217ENST00000569429 BACH1O14867 736 aa7.47□□□□□ -1.21
HERPUD1-217ENST00000569429 TLX3O43711 291 aaPredicted RBP7.47□□□□□ -1.21
HERPUD1-217ENST00000569429 CBFA2T3O75081 653 aa7.47□□□□□ -1.21
HERPUD1-217ENST00000569429 CSDE1O75534 798 aaKnown RBP7.47□□□□□ -1.21
HERPUD1-217ENST00000569429 GJB3O75712 270 aa7.47□□□□□ -1.21
HERPUD1-217ENST00000569429 BCKDHBP21953 392 aa7.47□□□□□ -1.21
HERPUD1-217ENST00000569429 SFPQP23246 707 aaKnown RBP eCLIP7.47□□□□□ -1.21
HERPUD1-217ENST00000569429 ADSSP30520 456 aa7.47□□□□□ -1.21
HERPUD1-217ENST00000569429 CDC42EP1Q00587 391 aa7.47□□□□□ -1.21
HERPUD1-217ENST00000569429 SPIRE1Q08AE8 756 aa7.47□□□□□ -1.21
HERPUD1-217ENST00000569429 PKDCCQ504Y2 493 aa7.47□□□□□ -1.21
HERPUD1-217ENST00000569429 TMEM196Q5HYL7 178 aa7.47□□□□□ -1.21
HERPUD1-217ENST00000569429 USP17L6PQ6QN14 398 aa7.47□□□□□ -1.21
HERPUD1-217ENST00000569429 MFSD6Q6ZSS7 791 aa7.47□□□□□ -1.21
HERPUD1-217ENST00000569429 HOMER1Q86YM7 354 aa7.47□□□□□ -1.21
HERPUD1-217ENST00000569429 YAF2Q8IY57 180 aa7.47□□□□□ -1.21
HERPUD1-217ENST00000569429 MINDY1Q8N5J2 469 aa7.47□□□□□ -1.21
HERPUD1-217ENST00000569429 DAGLBQ8NCG7 672 aa7.47□□□□□ -1.21
HERPUD1-217ENST00000569429 CEP76Q8TAP6 659 aa7.47□□□□□ -1.21
HERPUD1-217ENST00000569429 NLRP7Q8WX94 980 aa7.47□□□□□ -1.21
HERPUD1-217ENST00000569429 FRAT1Q92837 279 aaPredicted RBP7.47□□□□□ -1.21
HERPUD1-217ENST00000569429 CUL5Q93034 780 aa7.47□□□□□ -1.21
HERPUD1-217ENST00000569429 TCEAL4Q96EI5 215 aa7.47□□□□□ -1.21
HERPUD1-217ENST00000569429 ZSWIM3Q96MP5 696 aa7.47□□□□□ -1.21
HERPUD1-217ENST00000569429 PIGSQ96S52 555 aa7.47□□□□□ -1.21
HERPUD1-217ENST00000569429 ARID3AQ99856 593 aa7.47□□□□□ -1.21
HERPUD1-217ENST00000569429 GTPBP2Q9BX10 602 aaKnown RBP7.47□□□□□ -1.21
HERPUD1-217ENST00000569429 GCOM2Q9BZD3 368 aaPredicted RBP7.47□□□□□ -1.21
HERPUD1-217ENST00000569429 CAPN10Q9HC96 672 aa7.47□□□□□ -1.21
HERPUD1-217ENST00000569429 UBN1Q9NPG3 1134 aa7.47□□□□□ -1.21
HERPUD1-217ENST00000569429 ZNF302Q9NR11 478 aa7.47□□□□□ -1.21
HERPUD1-217ENST00000569429 KCNH7Q9NS40 1196 aa7.47□□□□□ -1.21
HERPUD1-217ENST00000569429 ECHDC1Q9NTX5 307 aa7.47□□□□□ -1.21
HERPUD1-217ENST00000569429 POLR3BQ9NW08 1133 aaPredicted RBP7.47□□□□□ -1.21
HERPUD1-217ENST00000569429 GTSE1Q9NYZ3 720 aa7.47□□□□□ -1.21
HERPUD1-217ENST00000569429 PILRBQ9UKJ0 227 aa7.47□□□□□ -1.21
HERPUD1-217ENST00000569429 ADAM28Q9UKQ2 775 aa7.47□□□□□ -1.21
HERPUD1-217ENST00000569429 INVSQ9Y283 1065 aa7.47□□□□□ -1.21
HERPUD1-217ENST00000569429 DENND4CQ5VZ89 1909 aa7.46□□□□□ -1.21
HERPUD1-217ENST00000569429 CSMD1Q96PZ7 3565 aa7.46□□□□□ -1.22
HERPUD1-217ENST00000569429 FBN3Q75N90 2809 aa7.46□□□□□ -1.22
HERPUD1-217ENST00000569429 DNHD1Q96M86 4753 aa7.46□□□□□ -1.22
HERPUD1-217ENST00000569429 PNMA6FA0A0J9YX94 578 aa7.46□□□□□ -1.22
HERPUD1-217ENST00000569429 ARHGEF37A1IGU5 675 aa7.46□□□□□ -1.22
HERPUD1-217ENST00000569429 ADAM12O43184 909 aa7.46□□□□□ -1.22
HERPUD1-217ENST00000569429 FGAP02671 866 aa7.46□□□□□ -1.22
HERPUD1-217ENST00000569429 SERPINF2P08697 491 aa7.46□□□□□ -1.22
HERPUD1-217ENST00000569429 CCR2P41597 374 aa7.46□□□□□ -1.22
HERPUD1-217ENST00000569429 DGKEP52429 567 aa7.46□□□□□ -1.22
HERPUD1-217ENST00000569429 GFPT1Q06210 699 aaPredicted RBP7.46□□□□□ -1.22
HERPUD1-217ENST00000569429 GRSF1Q12849 480 aaKnown RBP eCLIP7.46□□□□□ -1.22
HERPUD1-217ENST00000569429 GRM4Q14833 912 aa7.46□□□□□ -1.22
HERPUD1-217ENST00000569429 PSMD5Q16401 504 aa7.46□□□□□ -1.22
HERPUD1-217ENST00000569429 DUOXA1Q1HG43 343 aa7.46□□□□□ -1.22
HERPUD1-217ENST00000569429 SLC35G1Q2M3R5 365 aa7.46□□□□□ -1.22
HERPUD1-217ENST00000569429 SPDYCQ5MJ68 293 aa7.46□□□□□ -1.22
HERPUD1-217ENST00000569429 VPS53Q5VIR6 699 aa7.46□□□□□ -1.22
HERPUD1-217ENST00000569429 FSTL4Q6MZW2 842 aa7.46□□□□□ -1.22
HERPUD1-217ENST00000569429 LPCAT2Q7L5N7 544 aa7.46□□□□□ -1.22
HERPUD1-217ENST00000569429 RASSF3Q86WH2 238 aa7.46□□□□□ -1.22
HERPUD1-217ENST00000569429 IQCA1Q86XH1 822 aa7.46□□□□□ -1.22
HERPUD1-217ENST00000569429 TMC8Q8IU68 726 aa7.46□□□□□ -1.22
HERPUD1-217ENST00000569429 NAXDQ8IW45 347 aa7.46□□□□□ -1.22
HERPUD1-217ENST00000569429 LRRC71Q8N4P6 559 aa7.46□□□□□ -1.22
HERPUD1-217ENST00000569429 ZSCAN18Q8TBC5 510 aaPredicted RBP7.46□□□□□ -1.22
HERPUD1-217ENST00000569429 ESR2Q92731 530 aa7.46□□□□□ -1.22
HERPUD1-217ENST00000569429 MED8Q96G25 268 aa7.46□□□□□ -1.22
HERPUD1-217ENST00000569429 SCLT1Q96NL6 688 aa7.46□□□□□ -1.22
HERPUD1-217ENST00000569429 TTPALQ9BTX7 342 aa7.46□□□□□ -1.22
HERPUD1-217ENST00000569429 INO80BQ9C086 356 aaPredicted RBP7.46□□□□□ -1.22
HERPUD1-217ENST00000569429 GPR88Q9GZN0 384 aa7.46□□□□□ -1.22
HERPUD1-217ENST00000569429 LY9Q9HBG7 655 aa7.46□□□□□ -1.22
HERPUD1-217ENST00000569429 TOR4AQ9NXH8 423 aa7.46□□□□□ -1.22
HERPUD1-217ENST00000569429 MAD2L2Q9UI95 211 aa7.46□□□□□ -1.22
HERPUD1-217ENST00000569429 PAXBP1Q9Y5B6 917 aa7.46□□□□□ -1.22
HERPUD1-217ENST00000569429 MAFBQ9Y5Q3 323 aaPredicted RBP7.46□□□□□ -1.22
HERPUD1-217ENST00000569429 SPG11Q96JI7 2443 aa7.46□□□□□ -1.22
HERPUD1-217ENST00000569429 SVILO95425 2214 aa7.46□□□□□ -1.22
HERPUD1-217ENST00000569429 ARID2Q68CP9 1835 aa7.45□□□□□ -1.22
HERPUD1-217ENST00000569429 CRYBG3Q68DQ2 2970 aa7.45□□□□□ -1.22
HERPUD1-217ENST00000569429 PALM3A6NDB9 673 aaPredicted RBP7.45□□□□□ -1.22
HERPUD1-217ENST00000569429 ARHGAP33O14559 1287 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms