RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 RNF39Q9H2S5 420 aa17.41■□□□□ 0.38
USB1-215ENST00000569252 UBE2ZQ9H832 354 aaPredicted RBP17.41■□□□□ 0.38
USB1-215ENST00000569252 KLK14Q9P0G3 267 aa17.41■□□□□ 0.38
USB1-215ENST00000569252 MAGEC2Q9UBF1 373 aaPredicted RBP17.41■□□□□ 0.38
USB1-215ENST00000569252 CPSF3Q9UKF6 684 aaKnown RBP17.41■□□□□ 0.38
USB1-215ENST00000569252 INPP5FQ9Y2H2 1132 aa17.41■□□□□ 0.38
USB1-215ENST00000569252 INSL6Q9Y581 213 aa17.41■□□□□ 0.38
USB1-215ENST00000569252 C5orf42Q9H799 3197 aa17.4■□□□□ 0.38
USB1-215ENST00000569252 TRIM49BA6NDI0 452 aa17.4■□□□□ 0.38
USB1-215ENST00000569252 TBKBP1A7MCY6 615 aa17.4■□□□□ 0.38
USB1-215ENST00000569252 XPOTO43592 962 aaKnown RBP17.4■□□□□ 0.38
USB1-215ENST00000569252 TPM4P67936 248 aa17.4■□□□□ 0.38
USB1-215ENST00000569252 SPOUT1Q5T280 376 aaKnown RBP17.4■□□□□ 0.38
USB1-215ENST00000569252 FILIP1Q7Z7B0 1213 aa17.4■□□□□ 0.38
USB1-215ENST00000569252 ZNF598Q86UK7 904 aaKnown RBP17.4■□□□□ 0.38
USB1-215ENST00000569252 FAM114A1Q8IWE2 563 aa17.4■□□□□ 0.38
USB1-215ENST00000569252 CEP120Q8N960 986 aa17.4■□□□□ 0.38
USB1-215ENST00000569252 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.4■□□□□ 0.38
USB1-215ENST00000569252 HELQQ8TDG4 1101 aa17.4■□□□□ 0.38
USB1-215ENST00000569252 CACTINQ8WUQ7 758 aaKnown RBP17.4■□□□□ 0.38
USB1-215ENST00000569252 TSPAN18Q96SJ8 248 aa17.4■□□□□ 0.38
USB1-215ENST00000569252 RAD9AQ99638 391 aa17.4■□□□□ 0.38
USB1-215ENST00000569252 SRRTQ9BXP5 876 aaKnown RBP17.4■□□□□ 0.38
USB1-215ENST00000569252 MRPL9Q9BYD2 267 aaKnown RBP17.4■□□□□ 0.38
USB1-215ENST00000569252 TMEM117Q9H0C3 514 aa17.4■□□□□ 0.38
USB1-215ENST00000569252 DMAC2Q9NW81 257 aa17.4■□□□□ 0.38
USB1-215ENST00000569252 R3HCC1Q9Y3T6 440 aaKnown RBP17.4■□□□□ 0.38
USB1-215ENST00000569252 MICAL3Q7RTP6 2002 aa17.39■□□□□ 0.37
USB1-215ENST00000569252 ARL5CA6NH57 179 aa17.39■□□□□ 0.37
USB1-215ENST00000569252 H3BQ06 376 aaPredicted RBP17.39■□□□□ 0.37
USB1-215ENST00000569252 OFD1O75665 1012 aa17.39■□□□□ 0.37
USB1-215ENST00000569252 CSPG5O95196 566 aa17.39■□□□□ 0.37
USB1-215ENST00000569252 THP07101 528 aa17.39■□□□□ 0.37
USB1-215ENST00000569252 FGFR1P11362 822 aa17.39■□□□□ 0.37
USB1-215ENST00000569252 TNFSF9P41273 254 aa17.39■□□□□ 0.37
USB1-215ENST00000569252 BTG3Q14201 252 aaPredicted RBP17.39■□□□□ 0.37
USB1-215ENST00000569252 CCDC40Q4G0X9 1142 aa17.39■□□□□ 0.37
USB1-215ENST00000569252 ZCWPW2Q504Y3 356 aa17.39■□□□□ 0.37
USB1-215ENST00000569252 NOMO2Q5JPE7 1267 aa17.39■□□□□ 0.37
USB1-215ENST00000569252 SPATA1Q5VX52 437 aa17.39■□□□□ 0.37
USB1-215ENST00000569252 TTI2Q6NXR4 508 aa17.39■□□□□ 0.37
USB1-215ENST00000569252 AGMOQ6ZNB7 445 aa17.39■□□□□ 0.37
USB1-215ENST00000569252 FAM186BQ8IYM0 893 aa17.39■□□□□ 0.37
USB1-215ENST00000569252 ENOX1Q8TC92 643 aaKnown RBP17.39■□□□□ 0.37
USB1-215ENST00000569252 GAD1Q99259 594 aa17.39■□□□□ 0.37
USB1-215ENST00000569252 TSPY26PQ9H489 355 aa17.39■□□□□ 0.37
USB1-215ENST00000569252 ASB7Q9H672 318 aa17.39■□□□□ 0.37
USB1-215ENST00000569252 METTL14Q9HCE5 456 aaKnown RBP17.39■□□□□ 0.37
USB1-215ENST00000569252 SLC38A7Q9NVC3 462 aa17.39■□□□□ 0.37
USB1-215ENST00000569252 HCN4Q9Y3Q4 1203 aa17.39■□□□□ 0.37
USB1-215ENST00000569252 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.39■□□□□ 0.37
USB1-215ENST00000569252 LACTBL1A8MY62 500 aa17.38■□□□□ 0.37
USB1-215ENST00000569252 MAPK13O15264 365 aa17.38■□□□□ 0.37
USB1-215ENST00000569252 SLC16A3O15427 465 aaKnown RBP17.38■□□□□ 0.37
USB1-215ENST00000569252 DGKIO75912 1065 aa17.38■□□□□ 0.37
USB1-215ENST00000569252 CXCL8P10145 99 aa17.38■□□□□ 0.37
USB1-215ENST00000569252 MLH1P40692 756 aa17.38■□□□□ 0.37
USB1-215ENST00000569252 ZNF165P49910 485 aa17.38■□□□□ 0.37
USB1-215ENST00000569252 PMS1P54277 932 aaKnown RBP17.38■□□□□ 0.37
USB1-215ENST00000569252 ERVK-21P61565 698 aa17.38■□□□□ 0.37
USB1-215ENST00000569252 SLC10A6Q3KNW5 377 aa17.38■□□□□ 0.37
USB1-215ENST00000569252 LRSAM1Q6UWE0 723 aa17.38■□□□□ 0.37
USB1-215ENST00000569252 INTS8Q75QN2 995 aaKnown RBP17.38■□□□□ 0.37
USB1-215ENST00000569252 CBWD2Q8IUF1 395 aa17.38■□□□□ 0.37
USB1-215ENST00000569252 ANKRD20A12PQ8NF67 263 aa17.38■□□□□ 0.37
USB1-215ENST00000569252 FBXL18Q96ME1 805 aa17.38■□□□□ 0.37
USB1-215ENST00000569252 TGS1Q96RS0 853 aaKnown RBP17.38■□□□□ 0.37
USB1-215ENST00000569252 MKNK1Q9BUB5 465 aa17.38■□□□□ 0.37
USB1-215ENST00000569252 WDFY4Q6ZS81 3184 aa17.38■□□□□ 0.37
USB1-215ENST00000569252 ATG2AQ2TAZ0 1938 aa17.37■□□□□ 0.37
USB1-215ENST00000569252 PIEZO1Q92508 2521 aa17.37■□□□□ 0.37
USB1-215ENST00000569252 STX10O60499 249 aa17.37■□□□□ 0.37
USB1-215ENST00000569252 POMCP01189 267 aa17.37■□□□□ 0.37
USB1-215ENST00000569252 ATF7P17544 494 aaPredicted RBP17.37■□□□□ 0.37
USB1-215ENST00000569252 TNNI1P19237 187 aa17.37■□□□□ 0.37
USB1-215ENST00000569252 CDK11BP21127 795 aaKnown RBP17.37■□□□□ 0.37
USB1-215ENST00000569252 MYL5Q02045 173 aa17.37■□□□□ 0.37
USB1-215ENST00000569252 ENOX2Q16206 610 aaKnown RBP17.37■□□□□ 0.37
USB1-215ENST00000569252 PAN2Q504Q3 1202 aaKnown RBP17.37■□□□□ 0.37
USB1-215ENST00000569252 ZBTB41Q5SVQ8 909 aa17.37■□□□□ 0.37
USB1-215ENST00000569252 CRELD2Q6UXH1 353 aaPredicted RBP17.37■□□□□ 0.37
USB1-215ENST00000569252 NT5DC4Q86YG4 428 aa17.37■□□□□ 0.37
USB1-215ENST00000569252 BRSK2Q8IWQ3 736 aa17.37■□□□□ 0.37
USB1-215ENST00000569252 TMEM192Q8IY95 271 aa17.37■□□□□ 0.37
USB1-215ENST00000569252 FIBCD1Q8N539 461 aa17.37■□□□□ 0.37
USB1-215ENST00000569252 CCDC127Q96BQ5 260 aa17.37■□□□□ 0.37
USB1-215ENST00000569252 KIF12Q96FN5 646 aa17.37■□□□□ 0.37
USB1-215ENST00000569252 EEF2KMTQ96G04 330 aa17.37■□□□□ 0.37
USB1-215ENST00000569252 DUSP9Q99956 384 aaKnown RBP17.37■□□□□ 0.37
USB1-215ENST00000569252 BPIFA3Q9BQP9 254 aa17.37■□□□□ 0.37
USB1-215ENST00000569252 AAASQ9NRG9 546 aa17.37■□□□□ 0.37
USB1-215ENST00000569252 ARMCX3Q9UH62 379 aaPredicted RBP17.37■□□□□ 0.37
USB1-215ENST00000569252 DERAQ9Y315 318 aa17.37■□□□□ 0.37
USB1-215ENST00000569252 CARNS1A5YM72 827 aa17.36■□□□□ 0.37
USB1-215ENST00000569252 MEIS3P2A8K0S8 358 aa17.36■□□□□ 0.37
USB1-215ENST00000569252 GOLGA6L19H0YKK7 550 aa17.36■□□□□ 0.37
USB1-215ENST00000569252 FAM189A1O60320 539 aa17.36■□□□□ 0.37
USB1-215ENST00000569252 AKAP3O75969 853 aa17.36■□□□□ 0.37
USB1-215ENST00000569252 TPM2P07951 284 aa17.36■□□□□ 0.37
USB1-215ENST00000569252 DLATP10515 647 aaKnown RBP17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms