RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 CDK12Q9NYV4 1490 aaPredicted RBP7.48□□□□□ -1.21
CNOT1-216ENST00000569240 IRS4O14654 1257 aaPredicted RBP7.48□□□□□ -1.21
CNOT1-216ENST00000569240 PSMG1O95456 288 aa7.48□□□□□ -1.21
CNOT1-216ENST00000569240 STK4Q13043 487 aa7.48□□□□□ -1.21
CNOT1-216ENST00000569240 SPDYAQ5MJ70 313 aa7.48□□□□□ -1.21
CNOT1-216ENST00000569240 RWDD4Q6NW29 188 aaKnown RBP7.48□□□□□ -1.21
CNOT1-216ENST00000569240 BNC2Q6ZN30 1099 aaPredicted RBP7.48□□□□□ -1.21
CNOT1-216ENST00000569240 ZNF354CQ86Y25 554 aa7.48□□□□□ -1.21
CNOT1-216ENST00000569240 GSPT2Q8IYD1 628 aaKnown RBP7.48□□□□□ -1.21
CNOT1-216ENST00000569240 SLC10A4Q96EP9 437 aa7.48□□□□□ -1.21
CNOT1-216ENST00000569240 AMACRQ9UHK6 382 aa7.48□□□□□ -1.21
CNOT1-216ENST00000569240 PXDNLA1KZ92 1463 aa7.48□□□□□ -1.21
CNOT1-216ENST00000569240 KRT17Q04695 432 aa7.48□□□□□ -1.21
CNOT1-216ENST00000569240 OASLQ15646 514 aaKnown RBP7.48□□□□□ -1.21
CNOT1-216ENST00000569240 FAM47CQ5HY64 1035 aa7.48□□□□□ -1.21
CNOT1-216ENST00000569240 ZNF564Q8TBZ8 553 aaPredicted RBP7.48□□□□□ -1.21
CNOT1-216ENST00000569240 TSPAN17Q96FV3 270 aa7.48□□□□□ -1.21
CNOT1-216ENST00000569240 B3GALT6Q96L58 329 aa7.48□□□□□ -1.21
CNOT1-216ENST00000569240 CCDC17Q96LX7 622 aa7.48□□□□□ -1.21
CNOT1-216ENST00000569240 RBM15Q96T37 977 aaKnown RBP eCLIP7.48□□□□□ -1.211e-6■■□□□ 14.5
CNOT1-216ENST00000569240 PAIP1Q9H074 479 aaKnown RBP7.48□□□□□ -1.21
CNOT1-216ENST00000569240 ASNSD1Q9NWL6 643 aa7.48□□□□□ -1.21
CNOT1-216ENST00000569240 BFARQ9NZS9 450 aa7.48□□□□□ -1.21
CNOT1-216ENST00000569240 HDAC6Q9UBN7 1215 aa7.48□□□□□ -1.21
CNOT1-216ENST00000569240 ATP2B4P23634 1241 aa7.48□□□□□ -1.21
CNOT1-216ENST00000569240 SOX5P35711 763 aa7.48□□□□□ -1.21
CNOT1-216ENST00000569240 TECP42680 631 aa7.48□□□□□ -1.21
CNOT1-216ENST00000569240 GEMIN4P57678 1058 aaKnown RBP7.48□□□□□ -1.21
CNOT1-216ENST00000569240 EIF4A1P60842 406 aaKnown RBP7.48□□□□□ -1.21
CNOT1-216ENST00000569240 SLC15A2Q16348 729 aa7.48□□□□□ -1.21
CNOT1-216ENST00000569240 TTC39BQ5VTQ0 682 aaPredicted RBP7.48□□□□□ -1.21
CNOT1-216ENST00000569240 KRT74Q7RTS7 529 aa7.48□□□□□ -1.21
CNOT1-216ENST00000569240 ARHGEF19Q8IW93 802 aa7.48□□□□□ -1.21
CNOT1-216ENST00000569240 HACE1Q8IYU2 909 aa7.48□□□□□ -1.21
CNOT1-216ENST00000569240 MTERF3Q96E29 417 aa7.48□□□□□ -1.21
CNOT1-216ENST00000569240 STK33Q9BYT3 514 aa7.48□□□□□ -1.21
CNOT1-216ENST00000569240 TRIM8Q9BZR9 551 aa7.48□□□□□ -1.21
CNOT1-216ENST00000569240 CNOT8Q9UFF9 292 aaKnown RBP7.48□□□□□ -1.21
CNOT1-216ENST00000569240 EFR3BQ9Y2G0 817 aa7.48□□□□□ -1.21
CNOT1-216ENST00000569240 LEMD3Q9Y2U8 911 aa7.48□□□□□ -1.21
CNOT1-216ENST00000569240 C15orf38-AP3S2A0A0A6YYH1 394 aa7.47□□□□□ -1.21
CNOT1-216ENST00000569240 ESYT3A0FGR9 886 aa7.47□□□□□ -1.21
CNOT1-216ENST00000569240 NEURL1BA8MQ27 555 aa7.47□□□□□ -1.21
CNOT1-216ENST00000569240 MGRN1O60291 552 aa7.47□□□□□ -1.21
CNOT1-216ENST00000569240 UFL1O94874 794 aa7.47□□□□□ -1.21
CNOT1-216ENST00000569240 RAPGEF3O95398 923 aa7.47□□□□□ -1.21
CNOT1-216ENST00000569240 CYP2J2P51589 502 aa7.47□□□□□ -1.21
CNOT1-216ENST00000569240 PDIA2Q13087 525 aaKnown RBP7.47□□□□□ -1.21
CNOT1-216ENST00000569240 DMP1Q13316 513 aaPredicted RBP7.47□□□□□ -1.21
CNOT1-216ENST00000569240 PDIA5Q14554 519 aa7.47□□□□□ -1.21
CNOT1-216ENST00000569240 ARPINQ7Z6K5 226 aa7.47□□□□□ -1.21
CNOT1-216ENST00000569240 ADAT2Q7Z6V5 191 aaKnown RBP7.47□□□□□ -1.21
CNOT1-216ENST00000569240 CDH24Q86UP0 819 aa7.47□□□□□ -1.21
CNOT1-216ENST00000569240 PNMA1Q8ND90 353 aa7.47□□□□□ -1.21
CNOT1-216ENST00000569240 HIPK4Q8NE63 616 aa7.47□□□□□ -1.21
CNOT1-216ENST00000569240 SUN5Q8TC36 379 aa7.47□□□□□ -1.21
CNOT1-216ENST00000569240 CHURC1Q8WUH1 139 aa7.47□□□□□ -1.21
CNOT1-216ENST00000569240 C7orf25Q9BPX7 421 aa7.47□□□□□ -1.21
CNOT1-216ENST00000569240 ABCC10Q5T3U5 1492 aa7.47□□□□□ -1.21
CNOT1-216ENST00000569240 WDR62O43379 1518 aa7.47□□□□□ -1.21
CNOT1-216ENST00000569240 C6orf229H3BNL8 230 aa7.47□□□□□ -1.21
CNOT1-216ENST00000569240 K7ENM7 598 aa7.47□□□□□ -1.21
CNOT1-216ENST00000569240 TNPO2O14787 897 aaKnown RBP7.47□□□□□ -1.21
CNOT1-216ENST00000569240 PRPSAP2O60256 369 aa7.47□□□□□ -1.21
CNOT1-216ENST00000569240 LZTS3O60299 673 aaPredicted RBP7.47□□□□□ -1.21
CNOT1-216ENST00000569240 PTPN12Q05209 780 aaKnown RBP7.47□□□□□ -1.21
CNOT1-216ENST00000569240 MTFR1Q15390 333 aa7.47□□□□□ -1.21
CNOT1-216ENST00000569240 ERMARDQ5T6L9 678 aa7.47□□□□□ -1.21
CNOT1-216ENST00000569240 TTC8Q8TAM2 541 aa7.47□□□□□ -1.21
CNOT1-216ENST00000569240 ZBED2Q9BTP6 218 aa7.47□□□□□ -1.21
CNOT1-216ENST00000569240 C9orf16Q9BUW7 83 aa7.47□□□□□ -1.21
CNOT1-216ENST00000569240 KIF17Q9P2E2 1029 aa7.47□□□□□ -1.21
CNOT1-216ENST00000569240 MAGI2Q86UL8 1455 aa7.47□□□□□ -1.21
CNOT1-216ENST00000569240 HNRNPCL2B2RXH8 293 aa7.47□□□□□ -1.21
CNOT1-216ENST00000569240 MAFGO15525 162 aa7.47□□□□□ -1.21
CNOT1-216ENST00000569240 PJA2O43164 708 aa7.47□□□□□ -1.21
CNOT1-216ENST00000569240 METTL16Q86W50 562 aaKnown RBP7.47□□□□□ -1.21
CNOT1-216ENST00000569240 SIRT2Q8IXJ6 389 aa7.47□□□□□ -1.21
CNOT1-216ENST00000569240 PNPT1Q8TCS8 783 aaKnown RBP7.47□□□□□ -1.21
CNOT1-216ENST00000569240 FAF2Q96CS3 445 aa7.47□□□□□ -1.21
CNOT1-216ENST00000569240 OTUB1Q96FW1 271 aaPredicted RBP7.47□□□□□ -1.21
CNOT1-216ENST00000569240 MRPL11Q9Y3B7 192 aaKnown RBP7.47□□□□□ -1.21
CNOT1-216ENST00000569240 TEX33O43247 280 aa7.47□□□□□ -1.21
CNOT1-216ENST00000569240 AKAP10O43572 662 aa7.47□□□□□ -1.21
CNOT1-216ENST00000569240 SNX3O60493 162 aa7.47□□□□□ -1.21
CNOT1-216ENST00000569240 TOMM70O94826 608 aa7.47□□□□□ -1.21
CNOT1-216ENST00000569240 GYPCP04921 128 aa7.47□□□□□ -1.21
CNOT1-216ENST00000569240 NUDT17P0C025 328 aa7.47□□□□□ -1.21
CNOT1-216ENST00000569240 VAV1P15498 845 aa7.47□□□□□ -1.21
CNOT1-216ENST00000569240 KCNA2P16389 499 aa7.47□□□□□ -1.21
CNOT1-216ENST00000569240 ZNF200P98182 395 aaPredicted RBP7.47□□□□□ -1.21
CNOT1-216ENST00000569240 KIF19Q2TAC6 998 aa7.47□□□□□ -1.21
CNOT1-216ENST00000569240 MIS18BP1Q6P0N0 1132 aa7.47□□□□□ -1.21
CNOT1-216ENST00000569240 BBS7Q8IWZ6 715 aa7.47□□□□□ -1.21
CNOT1-216ENST00000569240 LEMD2Q8NC56 503 aa7.47□□□□□ -1.21
CNOT1-216ENST00000569240 ARL8AQ96BM9 186 aa7.47□□□□□ -1.21
CNOT1-216ENST00000569240 NMD3Q96D46 503 aaKnown RBP7.47□□□□□ -1.21
CNOT1-216ENST00000569240 ACAP3Q96P50 834 aa7.47□□□□□ -1.21
CNOT1-216ENST00000569240 EHD1Q9H4M9 534 aa7.47□□□□□ -1.21
CNOT1-216ENST00000569240 ARMT1Q9H993 441 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms