RNA–Protein interactions for RNA: ENST00000569062.1

ABCA3-206, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 5

Gene ABCA3, Length 900 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-206ENST00000569062 SLC10A6Q3KNW5 377 aa22.02■■□□□ 1.12
ABCA3-206ENST00000569062 HERC4Q5GLZ8 1057 aaPredicted RBP22.02■■□□□ 1.12
ABCA3-206ENST00000569062 ATAT1Q5SQI0 421 aa22.02■■□□□ 1.12
ABCA3-206ENST00000569062 CD300LGQ6UXG3 332 aa22.02■■□□□ 1.12
ABCA3-206ENST00000569062 SPATA31D4Q6ZUB0 917 aa22.02■■□□□ 1.12
ABCA3-206ENST00000569062 GPR65Q8IYL9 337 aa22.02■■□□□ 1.12
ABCA3-206ENST00000569062 C3orf58Q8NDZ4 430 aa22.02■■□□□ 1.12
ABCA3-206ENST00000569062 TTPALQ9BTX7 342 aa22.02■■□□□ 1.12
ABCA3-206ENST00000569062 TSHZ2Q9NRE2 1034 aa22.02■■□□□ 1.12
ABCA3-206ENST00000569062 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP22.02■■□□□ 1.12
ABCA3-206ENST00000569062 CNTN3Q9P232 1028 aa22.02■■□□□ 1.12
ABCA3-206ENST00000569062 RAPGEFL1Q9UHV5 662 aa22.02■■□□□ 1.12
ABCA3-206ENST00000569062 TMEM189-UBE2V1I3L0A0 370 aa22.01■■□□□ 1.11
ABCA3-206ENST00000569062 TGM5O43548 720 aa22.01■■□□□ 1.11
ABCA3-206ENST00000569062 KCNE1P15382 129 aa22.01■■□□□ 1.11
ABCA3-206ENST00000569062 LIG4P49917 911 aa22.01■■□□□ 1.11
ABCA3-206ENST00000569062 FOXD4L6Q3SYB3 417 aaPredicted RBP22.01■■□□□ 1.11
ABCA3-206ENST00000569062 DCLRE1AQ6PJP8 1040 aa22.01■■□□□ 1.11
ABCA3-206ENST00000569062 FOXD4L3Q6VB84 417 aaPredicted RBP22.01■■□□□ 1.11
ABCA3-206ENST00000569062 GPR149Q86SP6 731 aa22.01■■□□□ 1.11
ABCA3-206ENST00000569062 LNX1Q8TBB1 728 aaPredicted RBP22.01■■□□□ 1.11
ABCA3-206ENST00000569062 DDX12PQ92771 950 aa22.01■■□□□ 1.11
ABCA3-206ENST00000569062 C18orf25Q96B23 403 aaPredicted RBP22.01■■□□□ 1.11
ABCA3-206ENST00000569062 UROC1Q96N76 676 aa22.01■■□□□ 1.11
ABCA3-206ENST00000569062 ZNF396Q96N95 335 aaPredicted RBP22.01■■□□□ 1.11
ABCA3-206ENST00000569062 MYMKA6NI61 221 aa22■■□□□ 1.11
ABCA3-206ENST00000569062 HNRNPDLO14979 420 aaKnown RBP22■■□□□ 1.11
ABCA3-206ENST00000569062 SPTLC2O15270 562 aa22■■□□□ 1.11
ABCA3-206ENST00000569062 PIGRP01833 764 aa22■■□□□ 1.11
ABCA3-206ENST00000569062 ZSCAN22P10073 491 aaPredicted RBP22■■□□□ 1.11
ABCA3-206ENST00000569062 TNFSF9P41273 254 aa22■■□□□ 1.11
ABCA3-206ENST00000569062 GTF2BQ00403 316 aa22■■□□□ 1.11
ABCA3-206ENST00000569062 ELAVL2Q12926 359 aaKnown RBP22■■□□□ 1.11
ABCA3-206ENST00000569062 PKP1Q13835 747 aa22■■□□□ 1.11
ABCA3-206ENST00000569062 ZC2HC1CQ53FD0 456 aaPredicted RBP22■■□□□ 1.11
ABCA3-206ENST00000569062 SV2BQ7L1I2 683 aa22■■□□□ 1.11
ABCA3-206ENST00000569062 PIK3R5Q8WYR1 880 aa22■■□□□ 1.11
ABCA3-206ENST00000569062 SLC38A7Q9NVC3 462 aa22■■□□□ 1.11
ABCA3-206ENST00000569062 C2CD4DB7Z1M9 353 aa21.99■■□□□ 1.11
ABCA3-206ENST00000569062 I3L4J1 428 aa21.99■■□□□ 1.11
ABCA3-206ENST00000569062 RFPL2O75678 378 aa21.99■■□□□ 1.11
ABCA3-206ENST00000569062 F13A1P00488 732 aa21.99■■□□□ 1.11
ABCA3-206ENST00000569062 CXCL8P10145 99 aa21.99■■□□□ 1.11
ABCA3-206ENST00000569062 SCP2P22307 547 aa21.99■■□□□ 1.11
ABCA3-206ENST00000569062 STAT6P42226 847 aa21.99■■□□□ 1.11
ABCA3-206ENST00000569062 BRCC3P46736 316 aa21.99■■□□□ 1.11
ABCA3-206ENST00000569062 PSMD5Q16401 504 aa21.99■■□□□ 1.11
ABCA3-206ENST00000569062 SLC39A4Q6P5W5 647 aa21.99■■□□□ 1.11
ABCA3-206ENST00000569062 LILRA6Q6PI73 481 aa21.99■■□□□ 1.11
ABCA3-206ENST00000569062 CCDC73Q6ZRK6 1079 aa21.99■■□□□ 1.11
ABCA3-206ENST00000569062 SFR1Q86XK3 245 aa21.99■■□□□ 1.11
ABCA3-206ENST00000569062 PDILTQ8N807 584 aa21.99■■□□□ 1.11
ABCA3-206ENST00000569062 DNAJC19Q96DA6 116 aa21.99■■□□□ 1.11
ABCA3-206ENST00000569062 CLSTN3Q9BQT9 956 aa21.99■■□□□ 1.11
ABCA3-206ENST00000569062 NR2E1Q9Y466 385 aa21.99■■□□□ 1.11
ABCA3-206ENST00000569062 CCDC195A0A1B0GUA6 201 aa21.98■■□□□ 1.11
ABCA3-206ENST00000569062 PODXLO00592 558 aa21.98■■□□□ 1.11
ABCA3-206ENST00000569062 PPP6R2O75170 966 aa21.98■■□□□ 1.11
ABCA3-206ENST00000569062 FGFR3P22607 806 aa21.98■■□□□ 1.11
ABCA3-206ENST00000569062 CREMQ03060 361 aa21.98■■□□□ 1.11
ABCA3-206ENST00000569062 SPAG1Q07617 926 aa21.98■■□□□ 1.11
ABCA3-206ENST00000569062 ZBTB41Q5SVQ8 909 aa21.98■■□□□ 1.11
ABCA3-206ENST00000569062 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.98■■□□□ 1.11
ABCA3-206ENST00000569062 C15orf39Q6ZRI6 1047 aa21.98■■□□□ 1.11
ABCA3-206ENST00000569062 MAP4K3Q8IVH8 894 aa21.98■■□□□ 1.11
ABCA3-206ENST00000569062 TMEM130Q8N3G9 435 aa21.98■■□□□ 1.11
ABCA3-206ENST00000569062 ANK1P16157 1881 aa21.97■■□□□ 1.11
ABCA3-206ENST00000569062 PRR33A8MZF0 331 aa21.97■■□□□ 1.11
ABCA3-206ENST00000569062 ANKRD63C9JTQ0 380 aa21.97■■□□□ 1.11
ABCA3-206ENST00000569062 ADAM12O43184 909 aa21.97■■□□□ 1.11
ABCA3-206ENST00000569062 FAM189A1O60320 539 aa21.97■■□□□ 1.11
ABCA3-206ENST00000569062 YEATS4O95619 227 aa21.97■■□□□ 1.11
ABCA3-206ENST00000569062 CLTAP09496 248 aa21.97■■□□□ 1.11
ABCA3-206ENST00000569062 TKTP29401 623 aaKnown RBP21.97■■□□□ 1.11
ABCA3-206ENST00000569062 ZNF720Q7Z2F6 126 aa21.97■■□□□ 1.11
ABCA3-206ENST00000569062 CMASQ8NFW8 434 aaPredicted RBP21.97■■□□□ 1.11
ABCA3-206ENST00000569062 HDAC7Q8WUI4 952 aa21.97■■□□□ 1.11
ABCA3-206ENST00000569062 DDX27Q96GQ7 796 aaKnown RBP21.97■■□□□ 1.11
ABCA3-206ENST00000569062 IKZF4Q9H2S9 585 aa21.97■■□□□ 1.11
ABCA3-206ENST00000569062 ST6GALNAC4Q9H4F1 302 aa21.97■■□□□ 1.11
ABCA3-206ENST00000569062 TUBGCP4Q9UGJ1 667 aa21.97■■□□□ 1.11
ABCA3-206ENST00000569062 DPP7Q9UHL4 492 aa21.97■■□□□ 1.11
ABCA3-206ENST00000569062 MYO10Q9HD67 2058 aa21.97■■□□□ 1.11
ABCA3-206ENST00000569062 A0A0B4J269 797 aa21.96■■□□□ 1.11
ABCA3-206ENST00000569062 TTC26A0AVF1 554 aa21.96■■□□□ 1.11
ABCA3-206ENST00000569062 TISP43B9A030 160 aa21.96■■□□□ 1.11
ABCA3-206ENST00000569062 C1RP00736 705 aa21.96■■□□□ 1.11
ABCA3-206ENST00000569062 PDIA4P13667 645 aaKnown RBP21.96■■□□□ 1.11
ABCA3-206ENST00000569062 KREMEN2Q8NCW0 462 aa21.96■■□□□ 1.11
ABCA3-206ENST00000569062 EDAQ92838 391 aa21.96■■□□□ 1.11
ABCA3-206ENST00000569062 PLEKHA4Q9H4M7 779 aa21.96■■□□□ 1.11
ABCA3-206ENST00000569062 PLEKHA5Q9HAU0 1116 aa21.96■■□□□ 1.11
ABCA3-206ENST00000569062 TBC1D7Q9P0N9 293 aa21.96■■□□□ 1.11
ABCA3-206ENST00000569062 LACTBL1A8MY62 500 aa21.95■■□□□ 1.1
ABCA3-206ENST00000569062 OGTO15294 1046 aa21.95■■□□□ 1.1
ABCA3-206ENST00000569062 TRAPPC3O43617 180 aa21.95■■□□□ 1.1
ABCA3-206ENST00000569062 ABCD1P33897 745 aa21.95■■□□□ 1.1
ABCA3-206ENST00000569062 ZXDAP98168 799 aa21.95■■□□□ 1.1
ABCA3-206ENST00000569062 ENOX2Q16206 610 aaKnown RBP21.95■■□□□ 1.1
ABCA3-206ENST00000569062 PDXDC1Q6P996 788 aa21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms