RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 DNMT3BQ9UBC3 853 aaKnown RBP17.35■□□□□ 0.37
HERPUD1-215ENST00000568676 OTOGLQ3ZCN5 2332 aa17.35■□□□□ 0.37
HERPUD1-215ENST00000568676 MED19A0JLT2 244 aaPredicted RBP17.34■□□□□ 0.37
HERPUD1-215ENST00000568676 ARHGEF35A5YM69 484 aa17.34■□□□□ 0.37
HERPUD1-215ENST00000568676 BTBD18B2RXH4 712 aa17.34■□□□□ 0.37
HERPUD1-215ENST00000568676 ADAM12O43184 909 aa17.34■□□□□ 0.37
HERPUD1-215ENST00000568676 LRRN2O75325 713 aa17.34■□□□□ 0.37
HERPUD1-215ENST00000568676 PADI6Q6TGC4 694 aa17.34■□□□□ 0.37
HERPUD1-215ENST00000568676 ZNF852Q6ZMS4 543 aa17.34■□□□□ 0.37
HERPUD1-215ENST00000568676 ZNF461Q8TAF7 563 aa17.34■□□□□ 0.37
HERPUD1-215ENST00000568676 NELL1Q92832 810 aa17.34■□□□□ 0.37
HERPUD1-215ENST00000568676 DDX27Q96GQ7 796 aaKnown RBP17.34■□□□□ 0.37
HERPUD1-215ENST00000568676 IFT74Q96LB3 600 aa17.34■□□□□ 0.37
HERPUD1-215ENST00000568676 PPP1R10Q96QC0 940 aaKnown RBP17.34■□□□□ 0.37
HERPUD1-215ENST00000568676 KXD1Q9BQD3 176 aa17.34■□□□□ 0.37
HERPUD1-215ENST00000568676 TOPORSQ9NS56 1045 aaPredicted RBP17.34■□□□□ 0.37
HERPUD1-215ENST00000568676 CDY1Q9Y6F8 540 aa17.34■□□□□ 0.37
HERPUD1-215ENST00000568676 PHLPP2Q6ZVD8 1323 aa17.33■□□□□ 0.36
HERPUD1-215ENST00000568676 ARHGEF37A1IGU5 675 aa17.33■□□□□ 0.36
HERPUD1-215ENST00000568676 PRR5-ARHGAP8B1AHC4 643 aa17.33■□□□□ 0.36
HERPUD1-215ENST00000568676 TBC1D4O60343 1298 aa17.33■□□□□ 0.36
HERPUD1-215ENST00000568676 MICAL2O94851 1124 aa17.33■□□□□ 0.36
HERPUD1-215ENST00000568676 PTPN2P17706 415 aa17.33■□□□□ 0.36
HERPUD1-215ENST00000568676 ARHGAP8P85298 464 aa17.33■□□□□ 0.36
HERPUD1-215ENST00000568676 CSTF1Q05048 431 aaKnown RBP17.33■□□□□ 0.36
HERPUD1-215ENST00000568676 UPP1Q16831 310 aa17.33■□□□□ 0.36
HERPUD1-215ENST00000568676 HAUS3Q68CZ6 603 aa17.33■□□□□ 0.36
HERPUD1-215ENST00000568676 SLC8B1Q6J4K2 584 aa17.33■□□□□ 0.36
HERPUD1-215ENST00000568676 MAMSTRQ6ZN01 415 aa17.33■□□□□ 0.36
HERPUD1-215ENST00000568676 DCLK2Q8N568 766 aa17.33■□□□□ 0.36
HERPUD1-215ENST00000568676 ST13P5Q8NFI4 369 aaPredicted RBP17.33■□□□□ 0.36
HERPUD1-215ENST00000568676 KIFAP3Q92845 792 aa17.33■□□□□ 0.36
HERPUD1-215ENST00000568676 GTF3C6Q969F1 213 aa17.33■□□□□ 0.36
HERPUD1-215ENST00000568676 ELSPBP1Q96BH3 223 aa17.33■□□□□ 0.36
HERPUD1-215ENST00000568676 EPC1Q9H2F5 836 aa17.33■□□□□ 0.36
HERPUD1-215ENST00000568676 SLC38A7Q9NVC3 462 aa17.33■□□□□ 0.36
HERPUD1-215ENST00000568676 HCFC1R1Q9NWW0 138 aa17.33■□□□□ 0.36
HERPUD1-215ENST00000568676 GDAQ9Y2T3 454 aa17.33■□□□□ 0.36
HERPUD1-215ENST00000568676 PATJQ8NI35 1801 aa17.33■□□□□ 0.36
HERPUD1-215ENST00000568676 DNAH14Q0VDD8 3507 aa17.32■□□□□ 0.36
HERPUD1-215ENST00000568676 TTLL13PA6NNM8 815 aa17.32■□□□□ 0.36
HERPUD1-215ENST00000568676 MAN2B1O00754 1011 aa17.32■□□□□ 0.36
HERPUD1-215ENST00000568676 ZNF197O14709 1029 aa17.32■□□□□ 0.36
HERPUD1-215ENST00000568676 LILRB5O75023 590 aa17.32■□□□□ 0.36
HERPUD1-215ENST00000568676 MED24O75448 989 aa17.32■□□□□ 0.36
HERPUD1-215ENST00000568676 LRG1P02750 347 aa17.32■□□□□ 0.36
HERPUD1-215ENST00000568676 RHOP08100 348 aa17.32■□□□□ 0.36
HERPUD1-215ENST00000568676 ELF1P32519 619 aa17.32■□□□□ 0.36
HERPUD1-215ENST00000568676 CLCNKBP51801 687 aa17.32■□□□□ 0.36
HERPUD1-215ENST00000568676 YARSP54577 528 aaKnown RBP17.32■□□□□ 0.36
HERPUD1-215ENST00000568676 ADCY1Q08828 1119 aa17.32■□□□□ 0.36
HERPUD1-215ENST00000568676 PPP2R5DQ14738 602 aa17.32■□□□□ 0.36
HERPUD1-215ENST00000568676 SAFBQ15424 915 aaKnown RBP eCLIP17.32■□□□□ 0.36
HERPUD1-215ENST00000568676 ATF7IP2Q5U623 682 aa17.32■□□□□ 0.36
HERPUD1-215ENST00000568676 TPRG1Q6ZUI0 275 aa17.32■□□□□ 0.36
HERPUD1-215ENST00000568676 BSNDQ8WZ55 320 aa17.32■□□□□ 0.36
HERPUD1-215ENST00000568676 MAFFQ9ULX9 164 aa17.32■□□□□ 0.36
HERPUD1-215ENST00000568676 MTF2Q9Y483 593 aaPredicted RBP17.32■□□□□ 0.36
HERPUD1-215ENST00000568676 CACNA1IQ9P0X4 2223 aa17.32■□□□□ 0.36
HERPUD1-215ENST00000568676 DMXL1Q9Y485 3027 aa17.31■□□□□ 0.36
HERPUD1-215ENST00000568676 A0A087WWV3 80 aa17.31■□□□□ 0.36
HERPUD1-215ENST00000568676 SYN3O14994 580 aa17.31■□□□□ 0.36
HERPUD1-215ENST00000568676 ABLIM3O94929 683 aa17.31■□□□□ 0.36
HERPUD1-215ENST00000568676 TARSP26639 723 aaKnown RBP17.31■□□□□ 0.36
HERPUD1-215ENST00000568676 MCM7P33993 719 aa17.31■□□□□ 0.36
HERPUD1-215ENST00000568676 NRLP54845 237 aa17.31■□□□□ 0.36
HERPUD1-215ENST00000568676 LMNB2Q03252 620 aa17.31■□□□□ 0.36
HERPUD1-215ENST00000568676 RSPO4Q2I0M5 234 aaPredicted RBP17.31■□□□□ 0.36
HERPUD1-215ENST00000568676 NSUN7Q8NE18 718 aaKnown RBP17.31■□□□□ 0.36
HERPUD1-215ENST00000568676 CCDC94Q9BW85 323 aaPredicted RBP17.31■□□□□ 0.36
HERPUD1-215ENST00000568676 TMEM60Q9H2L4 133 aa17.31■□□□□ 0.36
HERPUD1-215ENST00000568676 TRPV5Q9NQA5 729 aa17.31■□□□□ 0.36
HERPUD1-215ENST00000568676 PRMT8Q9NR22 394 aaPredicted RBP17.31■□□□□ 0.36
HERPUD1-215ENST00000568676 TNFSF13BQ9Y275 285 aa17.31■□□□□ 0.36
HERPUD1-215ENST00000568676 STK24Q9Y6E0 443 aa17.31■□□□□ 0.36
HERPUD1-215ENST00000568676 VWA8A3KMH1 1905 aa17.31■□□□□ 0.36
HERPUD1-215ENST00000568676 H7C4K7 107 aa17.3■□□□□ 0.36
HERPUD1-215ENST00000568676 K7ERI5 159 aa17.3■□□□□ 0.36
HERPUD1-215ENST00000568676 WNT7AO00755 349 aa17.3■□□□□ 0.36
HERPUD1-215ENST00000568676 PRRG1O14668 218 aa17.3■□□□□ 0.36
HERPUD1-215ENST00000568676 ATF2P15336 505 aa17.3■□□□□ 0.36
HERPUD1-215ENST00000568676 LIG1P18858 919 aa17.3■□□□□ 0.36
HERPUD1-215ENST00000568676 TKTP29401 623 aaKnown RBP17.3■□□□□ 0.36
HERPUD1-215ENST00000568676 GRM5P41594 1212 aa17.3■□□□□ 0.36
HERPUD1-215ENST00000568676 ROR1Q01973 937 aa17.3■□□□□ 0.36
HERPUD1-215ENST00000568676 XKR4Q5GH76 650 aa17.3■□□□□ 0.36
HERPUD1-215ENST00000568676 EEF1DP3Q658K8 133 aa17.3■□□□□ 0.36
HERPUD1-215ENST00000568676 TCEAL8Q8IYN2 117 aa17.3■□□□□ 0.36
HERPUD1-215ENST00000568676 LEMD2Q8NC56 503 aa17.3■□□□□ 0.36
HERPUD1-215ENST00000568676 ING5Q8WYH8 240 aa17.3■□□□□ 0.36
HERPUD1-215ENST00000568676 IRF7Q92985 503 aa17.3■□□□□ 0.36
HERPUD1-215ENST00000568676 MCRS1Q96EZ8 462 aa17.3■□□□□ 0.36
HERPUD1-215ENST00000568676 CXCL16Q9H2A7 254 aa17.3■□□□□ 0.36
HERPUD1-215ENST00000568676 SMG5Q9UPR3 1016 aaKnown RBP17.3■□□□□ 0.36
HERPUD1-215ENST00000568676 SMIM28A0A1B0GU29 152 aa17.29■□□□□ 0.36
HERPUD1-215ENST00000568676 OR52Z1P0C646 297 aa17.29■□□□□ 0.36
HERPUD1-215ENST00000568676 CD72P21854 359 aa17.29■□□□□ 0.36
HERPUD1-215ENST00000568676 ME3Q16798 604 aa17.29■□□□□ 0.36
HERPUD1-215ENST00000568676 SLC5A9Q2M3M2 681 aa17.29■□□□□ 0.36
HERPUD1-215ENST00000568676 GLRA4Q5JXX5 417 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms