RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 NETO1Q8TDF5 533 aa13.04□□□□□ -0.32
GTF3C1-209ENST00000568569 MCRS1Q96EZ8 462 aa13.04□□□□□ -0.32
GTF3C1-209ENST00000568569 ADPGKQ9BRR6 497 aa13.04□□□□□ -0.32
GTF3C1-209ENST00000568569 PLA2G2FQ9BZM2 168 aa13.04□□□□□ -0.32
GTF3C1-209ENST00000568569 CHRDQ9H2X0 955 aa13.04□□□□□ -0.32
GTF3C1-209ENST00000568569 PDZD7Q9H5P4 517 aa13.04□□□□□ -0.32
GTF3C1-209ENST00000568569 ZSWIM6Q9HCJ5 1215 aa13.04□□□□□ -0.32
GTF3C1-209ENST00000568569 NDRG2Q9UN36 371 aaKnown RBP13.04□□□□□ -0.32
GTF3C1-209ENST00000568569 PCDHA12Q9UN75 941 aa13.04□□□□□ -0.32
GTF3C1-209ENST00000568569 BACE2Q9Y5Z0 518 aa13.04□□□□□ -0.32
GTF3C1-209ENST00000568569 CDY1Q9Y6F8 540 aa13.04□□□□□ -0.32
GTF3C1-209ENST00000568569 PATJQ8NI35 1801 aa13.04□□□□□ -0.32
GTF3C1-209ENST00000568569 CACNA1GO43497 2377 aa13.03□□□□□ -0.32
GTF3C1-209ENST00000568569 SHISA7A6NL88 538 aa13.03□□□□□ -0.32
GTF3C1-209ENST00000568569 LRP3O75074 770 aa13.03□□□□□ -0.32
GTF3C1-209ENST00000568569 CDKL5O76039 1030 aa13.03□□□□□ -0.32
GTF3C1-209ENST00000568569 REC8O95072 547 aa13.03□□□□□ -0.32
GTF3C1-209ENST00000568569 TDGF1P13385 188 aa13.03□□□□□ -0.32
GTF3C1-209ENST00000568569 CEBPBP17676 345 aa13.03□□□□□ -0.32
GTF3C1-209ENST00000568569 RBM25P49756 843 aaKnown RBP13.03□□□□□ -0.32
GTF3C1-209ENST00000568569 CCR3P51677 355 aa13.03□□□□□ -0.32
GTF3C1-209ENST00000568569 SPEM2Q0P670 501 aa13.03□□□□□ -0.32
GTF3C1-209ENST00000568569 STK3Q13188 491 aa13.03□□□□□ -0.32
GTF3C1-209ENST00000568569 TANGO2Q6ICL3 276 aa13.03□□□□□ -0.32
GTF3C1-209ENST00000568569 ANKS3Q6ZW76 656 aa13.03□□□□□ -0.32
GTF3C1-209ENST00000568569 ZNF687Q8N1G0 1237 aa13.03□□□□□ -0.32
GTF3C1-209ENST00000568569 OXER1Q8TDS5 423 aa13.03□□□□□ -0.32
GTF3C1-209ENST00000568569 PIGOQ8TEQ8 1089 aa13.03□□□□□ -0.32
GTF3C1-209ENST00000568569 C2orf40Q9H1Z8 148 aa13.03□□□□□ -0.32
GTF3C1-209ENST00000568569 FZD8Q9H461 694 aa13.03□□□□□ -0.32
GTF3C1-209ENST00000568569 BRD9Q9H8M2 597 aa13.03□□□□□ -0.32
GTF3C1-209ENST00000568569 ZFP14Q9HCL3 533 aa13.03□□□□□ -0.32
GTF3C1-209ENST00000568569 GPRC5CQ9NQ84 441 aa13.03□□□□□ -0.32
GTF3C1-209ENST00000568569 CYP46A1Q9Y6A2 500 aa13.03□□□□□ -0.32
GTF3C1-209ENST00000568569 SLC30A4O14863 429 aa13.02□□□□□ -0.33
GTF3C1-209ENST00000568569 TRAPPC3O43617 180 aa13.02□□□□□ -0.33
GTF3C1-209ENST00000568569 LRG1P02750 347 aa13.02□□□□□ -0.33
GTF3C1-209ENST00000568569 RETP07949 1114 aa13.02□□□□□ -0.33
GTF3C1-209ENST00000568569 PRPF4BQ13523 1007 aaKnown RBP13.02□□□□□ -0.33
GTF3C1-209ENST00000568569 CALCRLQ16602 461 aa13.02□□□□□ -0.33
GTF3C1-209ENST00000568569 LPAL2Q16609 132 aa13.02□□□□□ -0.33
GTF3C1-209ENST00000568569 MAPK6Q16659 721 aa13.02□□□□□ -0.33
GTF3C1-209ENST00000568569 PPM1JQ5JR12 505 aa13.02□□□□□ -0.33
GTF3C1-209ENST00000568569 CENPQQ7L2Z9 268 aaPredicted RBP13.02□□□□□ -0.33
GTF3C1-209ENST00000568569 MAEAQ7L5Y9 396 aa13.02□□□□□ -0.33
GTF3C1-209ENST00000568569 NOSTRINQ8IVI9 506 aa13.02□□□□□ -0.33
GTF3C1-209ENST00000568569 MCPH1Q8NEM0 835 aa13.02□□□□□ -0.33
GTF3C1-209ENST00000568569 DDX27Q96GQ7 796 aaKnown RBP13.02□□□□□ -0.33
GTF3C1-209ENST00000568569 LARP6Q9BRS8 491 aaKnown RBP13.02□□□□□ -0.33
GTF3C1-209ENST00000568569 TRMT61BQ9BVS5 477 aaKnown RBP13.02□□□□□ -0.33
GTF3C1-209ENST00000568569 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.02□□□□□ -0.33
GTF3C1-209ENST00000568569 STK36Q9NRP7 1315 aa13.02□□□□□ -0.33
GTF3C1-209ENST00000568569 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.01□□□□□ -0.33
GTF3C1-209ENST00000568569 ARHGEF37A1IGU5 675 aa13.01□□□□□ -0.33
GTF3C1-209ENST00000568569 TTLL13PA6NNM8 815 aa13.01□□□□□ -0.33
GTF3C1-209ENST00000568569 ZNF197O14709 1029 aa13.01□□□□□ -0.33
GTF3C1-209ENST00000568569 XRCC6P12956 609 aaKnown RBP eCLIP13.01□□□□□ -0.33
GTF3C1-209ENST00000568569 PTPN2P17706 415 aa13.01□□□□□ -0.33
GTF3C1-209ENST00000568569 FCARP24071 287 aa13.01□□□□□ -0.33
GTF3C1-209ENST00000568569 TKTP29401 623 aaKnown RBP13.01□□□□□ -0.33
GTF3C1-209ENST00000568569 ELF1P32519 619 aa13.01□□□□□ -0.33
GTF3C1-209ENST00000568569 ROR1Q01973 937 aa13.01□□□□□ -0.33
GTF3C1-209ENST00000568569 GRM2Q14416 872 aa13.01□□□□□ -0.33
GTF3C1-209ENST00000568569 DCAF4L1Q3SXM0 396 aa13.01□□□□□ -0.33
GTF3C1-209ENST00000568569 EARS2Q5JPH6 523 aaKnown RBP13.01□□□□□ -0.33
GTF3C1-209ENST00000568569 GLRA4Q5JXX5 417 aa13.01□□□□□ -0.33
GTF3C1-209ENST00000568569 PRSS36Q5K4E3 855 aa13.01□□□□□ -0.33
GTF3C1-209ENST00000568569 SLC8B1Q6J4K2 584 aa13.01□□□□□ -0.33
GTF3C1-209ENST00000568569 POTEHQ6S545 545 aa13.01□□□□□ -0.33
GTF3C1-209ENST00000568569 PRR23BQ6ZRT6 265 aa13.01□□□□□ -0.33
GTF3C1-209ENST00000568569 ZNF461Q8TAF7 563 aa13.01□□□□□ -0.33
GTF3C1-209ENST00000568569 FAM3CQ92520 227 aa13.01□□□□□ -0.33
GTF3C1-209ENST00000568569 IRF7Q92985 503 aa13.01□□□□□ -0.33
GTF3C1-209ENST00000568569 UROC1Q96N76 676 aa13.01□□□□□ -0.33
GTF3C1-209ENST00000568569 CXCL16Q9H2A7 254 aa13.01□□□□□ -0.33
GTF3C1-209ENST00000568569 TTC12Q9H892 705 aaPredicted RBP13.01□□□□□ -0.33
GTF3C1-209ENST00000568569 TRPV5Q9NQA5 729 aa13.01□□□□□ -0.33
GTF3C1-209ENST00000568569 GJB4Q9NTQ9 266 aa13.01□□□□□ -0.33
GTF3C1-209ENST00000568569 DAXXQ9UER7 740 aaPredicted RBP13.01□□□□□ -0.33
GTF3C1-209ENST00000568569 GDAQ9Y2T3 454 aa13.01□□□□□ -0.33
GTF3C1-209ENST00000568569 ARID2Q68CP9 1835 aa13□□□□□ -0.33
GTF3C1-209ENST00000568569 ACKR2O00590 384 aa13□□□□□ -0.33
GTF3C1-209ENST00000568569 PRRG1O14668 218 aa13□□□□□ -0.33
GTF3C1-209ENST00000568569 MICAL2O94851 1124 aa13□□□□□ -0.33
GTF3C1-209ENST00000568569 PRKCBP05771 671 aa13□□□□□ -0.33
GTF3C1-209ENST00000568569 ATP2B1P20020 1258 aa13□□□□□ -0.33
GTF3C1-209ENST00000568569 CLCNKBP51801 687 aa13□□□□□ -0.33
GTF3C1-209ENST00000568569 UPP1Q16831 310 aa13□□□□□ -0.33
GTF3C1-209ENST00000568569 FAM78AQ5JUQ0 283 aa13□□□□□ -0.33
GTF3C1-209ENST00000568569 PDZD4Q76G19 769 aaPredicted RBP13□□□□□ -0.33
GTF3C1-209ENST00000568569 ASB16Q96NS5 453 aa13□□□□□ -0.33
GTF3C1-209ENST00000568569 PPP1R10Q96QC0 940 aaKnown RBP13□□□□□ -0.33
GTF3C1-209ENST00000568569 CORO1BQ9BR76 489 aa13□□□□□ -0.33
GTF3C1-209ENST00000568569 LMAN1LQ9HAT1 526 aa13□□□□□ -0.33
GTF3C1-209ENST00000568569 BRMS1Q9HCU9 246 aa13□□□□□ -0.33
GTF3C1-209ENST00000568569 ZNF334Q9HCZ1 680 aaPredicted RBP13□□□□□ -0.33
GTF3C1-209ENST00000568569 SEMA4GQ9NTN9 838 aa13□□□□□ -0.33
GTF3C1-209ENST00000568569 PIAS3Q9Y6X2 628 aa13□□□□□ -0.33
GTF3C1-209ENST00000568569 USP24Q9UPU5 2620 aa13□□□□□ -0.33
GTF3C1-209ENST00000568569 A0A087WWV3 80 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms