RNA–Protein interactions for RNA: ENST00000568358.1

HERPUD1-213, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 751 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-213ENST00000568358 POLR3CQ9BUI4 534 aaPredicted RBP5.15□□□□□ -1.59
HERPUD1-213ENST00000568358 NFKBIZQ9BYH8 718 aa5.15□□□□□ -1.59
HERPUD1-213ENST00000568358 ZBP1Q9H171 429 aa5.15□□□□□ -1.59
HERPUD1-213ENST00000568358 POLR3FQ9H1D9 316 aaPredicted RBP5.15□□□□□ -1.59
HERPUD1-213ENST00000568358 MFSD1Q9H3U5 465 aa5.15□□□□□ -1.59
HERPUD1-213ENST00000568358 MINDY3Q9H8M7 445 aa5.15□□□□□ -1.59
HERPUD1-213ENST00000568358 UPF2Q9HAU5 1272 aaKnown RBP5.15□□□□□ -1.59
HERPUD1-213ENST00000568358 PIDD1Q9HB75 910 aa5.15□□□□□ -1.59
HERPUD1-213ENST00000568358 SH2B1Q9NRF2 756 aaPredicted RBP5.15□□□□□ -1.59
HERPUD1-213ENST00000568358 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.15□□□□□ -1.59
HERPUD1-213ENST00000568358 PRMT7Q9NVM4 692 aaPredicted RBP5.15□□□□□ -1.59
HERPUD1-213ENST00000568358 DNAAF2Q9NVR5 837 aaKnown RBP5.15□□□□□ -1.59
HERPUD1-213ENST00000568358 WRAP73Q9P2S5 460 aaPredicted RBP5.15□□□□□ -1.59
HERPUD1-213ENST00000568358 DNAJB4Q9UDY4 337 aa5.15□□□□□ -1.59
HERPUD1-213ENST00000568358 SEPT3Q9UH03 358 aa5.15□□□□□ -1.59
HERPUD1-213ENST00000568358 PRG3Q9Y2Y8 225 aaPredicted RBP5.15□□□□□ -1.59
HERPUD1-213ENST00000568358 IPPQ9Y573 584 aa5.15□□□□□ -1.59
HERPUD1-213ENST00000568358 MUC6Q6W4X9 2439 aa5.15□□□□□ -1.59
HERPUD1-213ENST00000568358 CITO14578 2027 aa5.14□□□□□ -1.59
HERPUD1-213ENST00000568358 A0A087WWV3 80 aa5.14□□□□□ -1.59
HERPUD1-213ENST00000568358 CCDC195A0A1B0GUA6 201 aa5.14□□□□□ -1.59
HERPUD1-213ENST00000568358 A0A1B0GUA9 196 aa5.14□□□□□ -1.59
HERPUD1-213ENST00000568358 MEIS3P2A8K0S8 358 aa5.14□□□□□ -1.59
HERPUD1-213ENST00000568358 K7ERI5 159 aa5.14□□□□□ -1.59
HERPUD1-213ENST00000568358 N4BP3O15049 544 aa5.14□□□□□ -1.59
HERPUD1-213ENST00000568358 TSPAN1O60635 241 aa5.14□□□□□ -1.59
HERPUD1-213ENST00000568358 JAK2O60674 1132 aa5.14□□□□□ -1.59
HERPUD1-213ENST00000568358 DTNBO60941 627 aa5.14□□□□□ -1.59
HERPUD1-213ENST00000568358 NPTXRO95502 500 aa5.14□□□□□ -1.59
HERPUD1-213ENST00000568358 GLUD1P00367 558 aa5.14□□□□□ -1.59
HERPUD1-213ENST00000568358 SOD2P04179 222 aa5.14□□□□□ -1.59
HERPUD1-213ENST00000568358 THP07101 528 aa5.14□□□□□ -1.59
HERPUD1-213ENST00000568358 CNPP09543 421 aaKnown RBP5.14□□□□□ -1.59
HERPUD1-213ENST00000568358 WEE2P0C1S8 567 aa5.14□□□□□ -1.59
HERPUD1-213ENST00000568358 OR52Z1P0C646 297 aa5.14□□□□□ -1.59
HERPUD1-213ENST00000568358 EPCAMP16422 314 aa5.14□□□□□ -1.59
HERPUD1-213ENST00000568358 ARF4P18085 180 aaPredicted RBP5.14□□□□□ -1.59
HERPUD1-213ENST00000568358 GLRA2P23416 452 aa5.14□□□□□ -1.59
HERPUD1-213ENST00000568358 AKAP5P24588 427 aa5.14□□□□□ -1.59
HERPUD1-213ENST00000568358 RPA1P27694 616 aa5.14□□□□□ -1.59
HERPUD1-213ENST00000568358 CCT6AP40227 531 aaKnown RBP5.14□□□□□ -1.59
HERPUD1-213ENST00000568358 MLH1P40692 756 aa5.14□□□□□ -1.59
HERPUD1-213ENST00000568358 TRAPPC10P48553 1259 aa5.14□□□□□ -1.59
HERPUD1-213ENST00000568358 GLUD2P49448 558 aa5.14□□□□□ -1.59
HERPUD1-213ENST00000568358 CLCN4P51793 760 aa5.14□□□□□ -1.59
HERPUD1-213ENST00000568358 EFNA5P52803 228 aa5.14□□□□□ -1.59
HERPUD1-213ENST00000568358 SEC13P55735 322 aa5.14□□□□□ -1.59
HERPUD1-213ENST00000568358 GUCY1B3Q02153 619 aa5.14□□□□□ -1.59
HERPUD1-213ENST00000568358 MBTD1Q05BQ5 628 aa5.14□□□□□ -1.59
HERPUD1-213ENST00000568358 ELAVL2Q12926 359 aaKnown RBP5.14□□□□□ -1.59
HERPUD1-213ENST00000568358 PRPF4BQ13523 1007 aaKnown RBP5.14□□□□□ -1.59
HERPUD1-213ENST00000568358 CAPSQ13938 189 aa5.14□□□□□ -1.59
HERPUD1-213ENST00000568358 PDIA5Q14554 519 aa5.14□□□□□ -1.59
HERPUD1-213ENST00000568358 PTPN14Q15678 1187 aa5.14□□□□□ -1.59
HERPUD1-213ENST00000568358 USP41Q3LFD5 358 aa5.14□□□□□ -1.59
HERPUD1-213ENST00000568358 TTC38Q5R3I4 469 aa5.14□□□□□ -1.59
HERPUD1-213ENST00000568358 UBXN11Q5T124 520 aa5.14□□□□□ -1.59
HERPUD1-213ENST00000568358 RNF187Q5TA31 235 aaPredicted RBP5.14□□□□□ -1.59
HERPUD1-213ENST00000568358 PDXDC1Q6P996 788 aa5.14□□□□□ -1.59
HERPUD1-213ENST00000568358 LYPD8Q6UX82 237 aa5.14□□□□□ -1.59
HERPUD1-213ENST00000568358 TMC5Q6UXY8 1006 aa5.14□□□□□ -1.59
HERPUD1-213ENST00000568358 CYP26C1Q6V0L0 522 aa5.14□□□□□ -1.59
HERPUD1-213ENST00000568358 C15orf39Q6ZRI6 1047 aa5.14□□□□□ -1.59
HERPUD1-213ENST00000568358 GPR149Q86SP6 731 aa5.14□□□□□ -1.59
HERPUD1-213ENST00000568358 CATSPER3Q86XQ3 398 aa5.14□□□□□ -1.59
HERPUD1-213ENST00000568358 COLGALT2Q8IYK4 626 aa5.14□□□□□ -1.59
HERPUD1-213ENST00000568358 ZDHHC14Q8IZN3 488 aa5.14□□□□□ -1.59
HERPUD1-213ENST00000568358 C12orf76Q8N812 135 aaPredicted RBP5.14□□□□□ -1.59
HERPUD1-213ENST00000568358 SMG8Q8ND04 991 aaKnown RBP5.14□□□□□ -1.59
HERPUD1-213ENST00000568358 ASAP3Q8TDY4 903 aa5.14□□□□□ -1.59
HERPUD1-213ENST00000568358 SLC22A17Q8WUG5 538 aa5.14□□□□□ -1.59
HERPUD1-213ENST00000568358 HDAC7Q8WUI4 952 aa5.14□□□□□ -1.59
HERPUD1-213ENST00000568358 KIFAP3Q92845 792 aa5.14□□□□□ -1.59
HERPUD1-213ENST00000568358 TNFRSF25Q93038 417 aa5.14□□□□□ -1.59
HERPUD1-213ENST00000568358 ALKBH8Q96BT7 664 aaKnown RBP5.14□□□□□ -1.59
HERPUD1-213ENST00000568358 EIF2AQ9BY44 585 aaKnown RBP5.14□□□□□ -1.59
HERPUD1-213ENST00000568358 PLEKHA4Q9H4M7 779 aa5.14□□□□□ -1.59
HERPUD1-213ENST00000568358 POMKQ9H5K3 350 aa5.14□□□□□ -1.59
HERPUD1-213ENST00000568358 LRWD1Q9UFC0 647 aa5.14□□□□□ -1.59
HERPUD1-213ENST00000568358 FKBPLQ9UIM3 349 aa5.14□□□□□ -1.59
HERPUD1-213ENST00000568358 KCNG1Q9UIX4 513 aa5.14□□□□□ -1.59
HERPUD1-213ENST00000568358 FBXL21Q9UKT6 434 aa5.14□□□□□ -1.59
HERPUD1-213ENST00000568358 SORCS3Q9UPU3 1222 aa5.14□□□□□ -1.59
HERPUD1-213ENST00000568358 KIAA1024Q9UPX6 916 aa5.14□□□□□ -1.59
HERPUD1-213ENST00000568358 DNM3Q9UQ16 869 aa5.14□□□□□ -1.59
HERPUD1-213ENST00000568358 GPSM3Q9Y4H4 160 aa5.14□□□□□ -1.59
HERPUD1-213ENST00000568358 HES2Q9Y543 173 aa5.14□□□□□ -1.59
HERPUD1-213ENST00000568358 C2orf16Q68DN1 1984 aa5.14□□□□□ -1.59
HERPUD1-213ENST00000568358 ZNF318Q5VUA4 2279 aa5.13□□□□□ -1.59
HERPUD1-213ENST00000568358 CCDC169A6NNP5 214 aa5.13□□□□□ -1.59
HERPUD1-213ENST00000568358 C2CD4DB7Z1M9 353 aa5.13□□□□□ -1.59
HERPUD1-213ENST00000568358 H3BQV1 296 aa5.13□□□□□ -1.59
HERPUD1-213ENST00000568358 LAD1O00515 517 aa5.13□□□□□ -1.59
HERPUD1-213ENST00000568358 ACKR2O00590 384 aa5.13□□□□□ -1.59
HERPUD1-213ENST00000568358 INPPL1O15357 1258 aa5.13□□□□□ -1.59
HERPUD1-213ENST00000568358 TRAPPC3O43617 180 aa5.13□□□□□ -1.59
HERPUD1-213ENST00000568358 MED24O75448 989 aa5.13□□□□□ -1.59
HERPUD1-213ENST00000568358 LARGE1O95461 756 aa5.13□□□□□ -1.59
HERPUD1-213ENST00000568358 C1RP00736 705 aa5.13□□□□□ -1.59
HERPUD1-213ENST00000568358 PRKCBP05771 671 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms