RNA–Protein interactions for RNA: ENST00000568034.1

COMMD4-222, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-222ENST00000568034 RPL13P26373 211 aaKnown RBP19.53■□□□□ 0.72
COMMD4-222ENST00000568034 PBX3P40426 434 aa19.53■□□□□ 0.72
COMMD4-222ENST00000568034 SLC11A1P49279 550 aa19.53■□□□□ 0.72
COMMD4-222ENST00000568034 ERVK-21P61565 698 aa19.53■□□□□ 0.72
COMMD4-222ENST00000568034 FKBP3Q00688 224 aaKnown RBP19.53■□□□□ 0.72
COMMD4-222ENST00000568034 RNASELQ05823 741 aaKnown RBP19.53■□□□□ 0.72
COMMD4-222ENST00000568034 PSMD6Q15008 389 aa19.53■□□□□ 0.72
COMMD4-222ENST00000568034 ZSCAN23Q3MJ62 389 aa19.53■□□□□ 0.72
COMMD4-222ENST00000568034 CEP135Q66GS9 1140 aa19.53■□□□□ 0.72
COMMD4-222ENST00000568034 COLGALT1Q8NBJ5 622 aa19.53■□□□□ 0.72
COMMD4-222ENST00000568034 KIF12Q96FN5 646 aa19.53■□□□□ 0.72
COMMD4-222ENST00000568034 BORCS6Q96GS4 357 aa19.53■□□□□ 0.72
COMMD4-222ENST00000568034 FAM84AQ96KN4 292 aa19.53■□□□□ 0.72
COMMD4-222ENST00000568034 GOLGA2P5Q9HBQ8 144 aa19.53■□□□□ 0.72
COMMD4-222ENST00000568034 ANO10Q9NW15 660 aa19.53■□□□□ 0.72
COMMD4-222ENST00000568034 TUBGCP4Q9UGJ1 667 aa19.53■□□□□ 0.72
COMMD4-222ENST00000568034 C2CD2Q9Y426 696 aa19.53■□□□□ 0.72
COMMD4-222ENST00000568034 CETN3O15182 167 aa19.52■□□□□ 0.72
COMMD4-222ENST00000568034 MAPK13O15264 365 aa19.52■□□□□ 0.72
COMMD4-222ENST00000568034 ZC3H11AO75152 810 aaKnown RBP eCLIP19.52■□□□□ 0.72
COMMD4-222ENST00000568034 GALTP07902 379 aa19.52■□□□□ 0.72
COMMD4-222ENST00000568034 LAG3P18627 525 aa19.52■□□□□ 0.72
COMMD4-222ENST00000568034 ERCC5P28715 1186 aaPredicted RBP19.52■□□□□ 0.72
COMMD4-222ENST00000568034 GUCY2FP51841 1108 aa19.52■□□□□ 0.72
COMMD4-222ENST00000568034 BCAR1P56945 870 aa19.52■□□□□ 0.72
COMMD4-222ENST00000568034 MCCD1P59942 119 aaPredicted RBP19.52■□□□□ 0.72
COMMD4-222ENST00000568034 TUSC3Q13454 348 aa19.52■□□□□ 0.72
COMMD4-222ENST00000568034 CT47A1Q5JQC4 288 aaPredicted RBP19.52■□□□□ 0.72
COMMD4-222ENST00000568034 TMEM173Q86WV6 379 aaPredicted RBP19.52■□□□□ 0.72
COMMD4-222ENST00000568034 TGS1Q96RS0 853 aaKnown RBP19.52■□□□□ 0.72
COMMD4-222ENST00000568034 TSPAN18Q96SJ8 248 aa19.52■□□□□ 0.72
COMMD4-222ENST00000568034 PAAF1Q9BRP4 392 aa19.52■□□□□ 0.72
COMMD4-222ENST00000568034 TMEM175Q9BSA9 504 aa19.52■□□□□ 0.72
COMMD4-222ENST00000568034 MKNK1Q9BUB5 465 aa19.52■□□□□ 0.72
COMMD4-222ENST00000568034 TTYH1Q9H313 450 aaPredicted RBP19.52■□□□□ 0.72
COMMD4-222ENST00000568034 SLC28A3Q9HAS3 691 aa19.52■□□□□ 0.72
COMMD4-222ENST00000568034 MARCH5Q9NX47 278 aa19.52■□□□□ 0.72
COMMD4-222ENST00000568034 DACH1Q9UI36 760 aa19.52■□□□□ 0.72
COMMD4-222ENST00000568034 DERAQ9Y315 318 aa19.52■□□□□ 0.72
COMMD4-222ENST00000568034 CDH23Q9H251 3354 aa19.51■□□□□ 0.71
COMMD4-222ENST00000568034 EPOPA6NHQ4 379 aa19.51■□□□□ 0.71
COMMD4-222ENST00000568034 CASTOR2A6NHX0 329 aa19.51■□□□□ 0.71
COMMD4-222ENST00000568034 C5orf67F2Z3F1 127 aa19.51■□□□□ 0.71
COMMD4-222ENST00000568034 F8W810 466 aa19.51■□□□□ 0.71
COMMD4-222ENST00000568034 SLC16A3O15427 465 aaKnown RBP19.51■□□□□ 0.71
COMMD4-222ENST00000568034 LETM1O95202 739 aaPredicted RBP19.51■□□□□ 0.71
COMMD4-222ENST00000568034 BMPR1AP36894 532 aa19.51■□□□□ 0.71
COMMD4-222ENST00000568034 TMEM132DQ14C87 1099 aa19.51■□□□□ 0.71
COMMD4-222ENST00000568034 C1orf220Q5T0J3 134 aa19.51■□□□□ 0.71
COMMD4-222ENST00000568034 SPATA1Q5VX52 437 aa19.51■□□□□ 0.71
COMMD4-222ENST00000568034 LMBRD2Q68DH5 695 aaPredicted RBP19.51■□□□□ 0.71
COMMD4-222ENST00000568034 KCNT2Q6UVM3 1135 aa19.51■□□□□ 0.71
COMMD4-222ENST00000568034 FAM186BQ8IYM0 893 aa19.51■□□□□ 0.71
COMMD4-222ENST00000568034 BCL7CQ8WUZ0 217 aaPredicted RBP19.51■□□□□ 0.71
COMMD4-222ENST00000568034 CEP63Q96MT8 703 aa19.51■□□□□ 0.71
COMMD4-222ENST00000568034 DNAJC25Q9H1X3 360 aa19.51■□□□□ 0.71
COMMD4-222ENST00000568034 SLC38A7Q9NVC3 462 aa19.51■□□□□ 0.71
COMMD4-222ENST00000568034 UBQLN1Q9UMX0 589 aaKnown RBP19.51■□□□□ 0.71
COMMD4-222ENST00000568034 FRMD4BQ9Y2L6 1034 aa19.51■□□□□ 0.71
COMMD4-222ENST00000568034 CHD7Q9P2D1 2997 aa19.5■□□□□ 0.71
COMMD4-222ENST00000568034 TMEM265A0A087WTH1 108 aa19.5■□□□□ 0.71
COMMD4-222ENST00000568034 NRP1O14786 923 aa19.5■□□□□ 0.71
COMMD4-222ENST00000568034 CYP3A5P20815 502 aa19.5■□□□□ 0.71
COMMD4-222ENST00000568034 IGFBP6P24592 240 aaPredicted RBP19.5■□□□□ 0.71
COMMD4-222ENST00000568034 PSMC2P35998 433 aaKnown RBP19.5■□□□□ 0.71
COMMD4-222ENST00000568034 CLDN10P78369 228 aa19.5■□□□□ 0.71
COMMD4-222ENST00000568034 HSP90AA2PQ14568 343 aaPredicted RBP19.5■□□□□ 0.71
COMMD4-222ENST00000568034 EPC2Q52LR7 807 aa19.5■□□□□ 0.71
COMMD4-222ENST00000568034 SPOUT1Q5T280 376 aaKnown RBP19.5■□□□□ 0.71
COMMD4-222ENST00000568034 SCARA3Q6AZY7 606 aa19.5■□□□□ 0.71
COMMD4-222ENST00000568034 CD300LGQ6UXG3 332 aa19.5■□□□□ 0.71
COMMD4-222ENST00000568034 SLC39A11Q8N1S5 342 aa19.5■□□□□ 0.71
COMMD4-222ENST00000568034 CSGALNACT2Q8N6G5 542 aa19.5■□□□□ 0.71
COMMD4-222ENST00000568034 OR5B17Q8NGF7 314 aa19.5■□□□□ 0.71
COMMD4-222ENST00000568034 PARD3BQ8TEW8 1205 aa19.5■□□□□ 0.71
COMMD4-222ENST00000568034 ZNF558Q96NG5 402 aa19.5■□□□□ 0.71
COMMD4-222ENST00000568034 SAMD11Q96NU1 681 aa19.5■□□□□ 0.71
COMMD4-222ENST00000568034 FAM193BQ96PV7 902 aaPredicted RBP19.5■□□□□ 0.71
COMMD4-222ENST00000568034 CGRRF1Q99675 332 aa19.5■□□□□ 0.71
COMMD4-222ENST00000568034 CERS4Q9HA82 394 aa19.5■□□□□ 0.71
COMMD4-222ENST00000568034 MTUS1Q9ULD2 1270 aa19.5■□□□□ 0.71
COMMD4-222ENST00000568034 RWDD3Q9Y3V2 267 aa19.5■□□□□ 0.71
COMMD4-222ENST00000568034 LRRIQ3A6PVS8 624 aaPredicted RBP19.49■□□□□ 0.71
COMMD4-222ENST00000568034 NT5C1B-RDH14C9J2C7 533 aa19.49■□□□□ 0.71
COMMD4-222ENST00000568034 LRPAP1P30533 357 aa19.49■□□□□ 0.71
COMMD4-222ENST00000568034 CTNNB1P35222 781 aa19.49■□□□□ 0.71
COMMD4-222ENST00000568034 OR1G1P47890 313 aa19.49■□□□□ 0.71
COMMD4-222ENST00000568034 FXR1P51114 621 aaKnown RBP eCLIP19.49■□□□□ 0.71
COMMD4-222ENST00000568034 DLG4P78352 724 aa19.49■□□□□ 0.71
COMMD4-222ENST00000568034 SURF1Q15526 300 aa19.49■□□□□ 0.71
COMMD4-222ENST00000568034 UPP1Q16831 310 aa19.49■□□□□ 0.71
COMMD4-222ENST00000568034 FILIP1Q7Z7B0 1213 aa19.49■□□□□ 0.71
COMMD4-222ENST00000568034 NT5DC4Q86YG4 428 aa19.49■□□□□ 0.71
COMMD4-222ENST00000568034 WDR49Q8IV35 697 aa19.49■□□□□ 0.71
COMMD4-222ENST00000568034 CXorf38Q8TB03 319 aa19.49■□□□□ 0.71
COMMD4-222ENST00000568034 TMC2Q8TDI7 906 aa19.49■□□□□ 0.71
COMMD4-222ENST00000568034 ZNF516Q92618 1163 aa19.49■□□□□ 0.71
COMMD4-222ENST00000568034 RABGGTAQ92696 567 aa19.49■□□□□ 0.71
COMMD4-222ENST00000568034 CCDC127Q96BQ5 260 aa19.49■□□□□ 0.71
COMMD4-222ENST00000568034 POP1Q99575 1024 aaKnown RBP19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms