RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 RNF10Q8N5U6 811 aaKnown RBP15.78■□□□□ 0.12
COMMD4-221ENST00000567935 RNF149Q8NC42 400 aa15.78■□□□□ 0.12
COMMD4-221ENST00000567935 TRIM58Q8NG06 486 aa15.78■□□□□ 0.12
COMMD4-221ENST00000567935 FNBP1Q96RU3 617 aa15.78■□□□□ 0.12
COMMD4-221ENST00000567935 NAPGQ99747 312 aaPredicted RBP15.78■□□□□ 0.12
COMMD4-221ENST00000567935 MSTO1Q9BUK6 570 aa15.78■□□□□ 0.12
COMMD4-221ENST00000567935 SUGCTQ9HAC7 445 aa15.78■□□□□ 0.12
COMMD4-221ENST00000567935 GUCA1BQ9UMX6 200 aa15.78■□□□□ 0.12
COMMD4-221ENST00000567935 ANO9A1A5B4 782 aa15.77■□□□□ 0.12
COMMD4-221ENST00000567935 LRRIQ3A6PVS8 624 aaPredicted RBP15.77■□□□□ 0.12
COMMD4-221ENST00000567935 BTNL10A8MVZ5 291 aa15.77■□□□□ 0.12
COMMD4-221ENST00000567935 H3BRB1 525 aa15.77■□□□□ 0.12
COMMD4-221ENST00000567935 ZNF263O14978 683 aa15.77■□□□□ 0.12
COMMD4-221ENST00000567935 CLDN3O15551 220 aa15.77■□□□□ 0.12
COMMD4-221ENST00000567935 TACC1O75410 805 aa15.77■□□□□ 0.12
COMMD4-221ENST00000567935 PGK1P00558 417 aa15.77■□□□□ 0.12
COMMD4-221ENST00000567935 PRKCBP05771 671 aa15.77■□□□□ 0.12
COMMD4-221ENST00000567935 INSRRP14616 1297 aa15.77■□□□□ 0.12
COMMD4-221ENST00000567935 CSF2RAP15509 400 aa15.77■□□□□ 0.12
COMMD4-221ENST00000567935 PHKA2P46019 1235 aa15.77■□□□□ 0.12
COMMD4-221ENST00000567935 PTENP60484 403 aa15.77■□□□□ 0.12
COMMD4-221ENST00000567935 TUBB4BP68371 445 aa15.77■□□□□ 0.12
COMMD4-221ENST00000567935 CDC42EP1Q00587 391 aa15.77■□□□□ 0.12
COMMD4-221ENST00000567935 POU5F1Q01860 360 aaKnown RBP15.77■□□□□ 0.12
COMMD4-221ENST00000567935 MKRN4PQ13434 485 aaPredicted RBP15.77■□□□□ 0.12
COMMD4-221ENST00000567935 DRAP1Q14919 205 aaPredicted RBP15.77■□□□□ 0.12
COMMD4-221ENST00000567935 FAM187BQ17R55 369 aa15.77■□□□□ 0.12
COMMD4-221ENST00000567935 FBXL13Q8NEE6 735 aa15.77■□□□□ 0.12
COMMD4-221ENST00000567935 PLEKHO2Q8TD55 490 aa15.77■□□□□ 0.12
COMMD4-221ENST00000567935 SECISBP2LQ93073 1101 aaKnown RBP15.77■□□□□ 0.12
COMMD4-221ENST00000567935 TOX2Q96NM4 488 aa15.77■□□□□ 0.12
COMMD4-221ENST00000567935 FAM213AQ9BRX8 229 aa15.77■□□□□ 0.12
COMMD4-221ENST00000567935 C16orf70Q9BSU1 422 aa15.77■□□□□ 0.12
COMMD4-221ENST00000567935 TARS2Q9BW92 718 aaKnown RBP15.77■□□□□ 0.12
COMMD4-221ENST00000567935 TUT1Q9H6E5 874 aaKnown RBP15.77■□□□□ 0.12
COMMD4-221ENST00000567935 XPNPEP3Q9NQH7 507 aa15.77■□□□□ 0.12
COMMD4-221ENST00000567935 PRMT7Q9NVM4 692 aaPredicted RBP15.77■□□□□ 0.12
COMMD4-221ENST00000567935 INTUQ9ULD6 942 aa15.77■□□□□ 0.12
COMMD4-221ENST00000567935 A6NJR5 290 aa15.76■□□□□ 0.11
COMMD4-221ENST00000567935 DCDC2CA8MYV0 355 aa15.76■□□□□ 0.11
COMMD4-221ENST00000567935 ACKR2O00590 384 aa15.76■□□□□ 0.11
COMMD4-221ENST00000567935 MFAP3P55082 362 aa15.76■□□□□ 0.11
COMMD4-221ENST00000567935 CYP27A1Q02318 531 aa15.76■□□□□ 0.11
COMMD4-221ENST00000567935 APBA1Q02410 837 aa15.76■□□□□ 0.11
COMMD4-221ENST00000567935 C15orf39Q6ZRI6 1047 aa15.76■□□□□ 0.11
COMMD4-221ENST00000567935 SLC35F6Q8N357 371 aa15.76■□□□□ 0.11
COMMD4-221ENST00000567935 LRRC71Q8N4P6 559 aa15.76■□□□□ 0.11
COMMD4-221ENST00000567935 LINC01465Q8N7H1 131 aa15.76■□□□□ 0.11
COMMD4-221ENST00000567935 CCDC127Q96BQ5 260 aa15.76■□□□□ 0.11
COMMD4-221ENST00000567935 NT5C1BQ96P26 610 aa15.76■□□□□ 0.11
COMMD4-221ENST00000567935 ALS2CR12Q96Q35 445 aa15.76■□□□□ 0.11
COMMD4-221ENST00000567935 FZD8Q9H461 694 aa15.76■□□□□ 0.11
COMMD4-221ENST00000567935 RNPEPQ9H4A4 650 aa15.76■□□□□ 0.11
COMMD4-221ENST00000567935 MRFAP1Q9Y605 127 aa15.76■□□□□ 0.11
COMMD4-221ENST00000567935 KAT6AQ92794 2004 aa15.75■□□□□ 0.11
COMMD4-221ENST00000567935 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.75■□□□□ 0.11
COMMD4-221ENST00000567935 OGTO15294 1046 aa15.75■□□□□ 0.11
COMMD4-221ENST00000567935 KLRC1P26715 233 aa15.75■□□□□ 0.11
COMMD4-221ENST00000567935 MATR3P43243 847 aaKnown RBP eCLIP15.75■□□□□ 0.11
COMMD4-221ENST00000567935 RABGGTBP53611 331 aa15.75■□□□□ 0.11
COMMD4-221ENST00000567935 ARID5AQ03989 594 aa15.75■□□□□ 0.11
COMMD4-221ENST00000567935 PTK2Q05397 1052 aa15.75■□□□□ 0.11
COMMD4-221ENST00000567935 GFPT1Q06210 699 aaPredicted RBP15.75■□□□□ 0.11
COMMD4-221ENST00000567935 MCL1Q07820 350 aa15.75■□□□□ 0.11
COMMD4-221ENST00000567935 PPFIA1Q13136 1202 aa15.75■□□□□ 0.11
COMMD4-221ENST00000567935 DRP2Q13474 957 aa15.75■□□□□ 0.11
COMMD4-221ENST00000567935 NAB2Q15742 525 aa15.75■□□□□ 0.11
COMMD4-221ENST00000567935 IFI16Q16666 785 aaKnown RBP15.75■□□□□ 0.11
COMMD4-221ENST00000567935 KYAT1Q16773 422 aa15.75■□□□□ 0.11
COMMD4-221ENST00000567935 TMEM63BQ5T3F8 832 aa15.75■□□□□ 0.11
COMMD4-221ENST00000567935 PHLDB3Q6NSJ2 640 aa15.75■□□□□ 0.11
COMMD4-221ENST00000567935 PSRC1Q6PGN9 363 aaPredicted RBP15.75■□□□□ 0.11
COMMD4-221ENST00000567935 TSHZ1Q6ZSZ6 1077 aa15.75■□□□□ 0.11
COMMD4-221ENST00000567935 RHPN2Q8IUC4 686 aa15.75■□□□□ 0.11
COMMD4-221ENST00000567935 BRSK2Q8IWQ3 736 aa15.75■□□□□ 0.11
COMMD4-221ENST00000567935 ZNF710Q8N1W2 664 aa15.75■□□□□ 0.11
COMMD4-221ENST00000567935 METTL13Q8N6R0 699 aa15.75■□□□□ 0.11
COMMD4-221ENST00000567935 MAP7D2Q96T17 732 aa15.75■□□□□ 0.11
COMMD4-221ENST00000567935 ACO2Q99798 780 aaKnown RBP15.75■□□□□ 0.11
COMMD4-221ENST00000567935 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.75■□□□□ 0.11
COMMD4-221ENST00000567935 LACRTQ9GZZ8 138 aa15.75■□□□□ 0.11
COMMD4-221ENST00000567935 RAB20Q9NX57 234 aa15.75■□□□□ 0.11
COMMD4-221ENST00000567935 RBAKQ9NYW8 714 aaPredicted RBP15.75■□□□□ 0.11
COMMD4-221ENST00000567935 GNEQ9Y223 722 aaKnown RBP15.75■□□□□ 0.11
COMMD4-221ENST00000567935 MTCH2Q9Y6C9 303 aa15.75■□□□□ 0.11
COMMD4-221ENST00000567935 PRRC2BQ5JSZ5 2229 aaKnown RBP15.75■□□□□ 0.11
COMMD4-221ENST00000567935 EVPLQ92817 2033 aa15.74■□□□□ 0.11
COMMD4-221ENST00000567935 RFXAPO00287 272 aa15.74■□□□□ 0.11
COMMD4-221ENST00000567935 ZEB2O60315 1214 aa15.74■□□□□ 0.11
COMMD4-221ENST00000567935 ZNF865P0CJ78 1059 aaPredicted RBP15.74■□□□□ 0.11
COMMD4-221ENST00000567935 SRGAP2CP0DJJ0 459 aa15.74■□□□□ 0.11
COMMD4-221ENST00000567935 RARBP10826 455 aa15.74■□□□□ 0.11
COMMD4-221ENST00000567935 MYOGP15173 224 aa15.74■□□□□ 0.11
COMMD4-221ENST00000567935 PROZP22891 400 aa15.74■□□□□ 0.11
COMMD4-221ENST00000567935 CPT1AP50416 773 aa15.74■□□□□ 0.11
COMMD4-221ENST00000567935 GCNT1Q02742 428 aa15.74■□□□□ 0.11
COMMD4-221ENST00000567935 ZACNQ401N2 412 aa15.74■□□□□ 0.11
COMMD4-221ENST00000567935 PPP2R2DQ66LE6 453 aa15.74■□□□□ 0.11
COMMD4-221ENST00000567935 MPZL3Q6UWV2 235 aa15.74■□□□□ 0.11
COMMD4-221ENST00000567935 SV2AQ7L0J3 742 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms