RNA–Protein interactions for RNA: ENST00000567445.1

CDH13-210, Transcript of cadherin 13, humanhuman

TSL 1 (best) BASIC

Gene CDH13, Length 1,456 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-210ENST00000567445 MFSD1Q9H3U5 465 aa10.14□□□□□ -0.79
CDH13-210ENST00000567445 PLEKHA4Q9H4M7 779 aa10.14□□□□□ -0.79
CDH13-210ENST00000567445 PDZD7Q9H5P4 517 aa10.14□□□□□ -0.79
CDH13-210ENST00000567445 KCNK12Q9HB15 430 aa10.14□□□□□ -0.79
CDH13-210ENST00000567445 WDR6Q9NNW5 1121 aaKnown RBP10.14□□□□□ -0.79
CDH13-210ENST00000567445 FNIP2Q9P278 1114 aa10.14□□□□□ -0.79
CDH13-210ENST00000567445 SF3B1O75533 1304 aaKnown RBP eCLIP10.13□□□□□ -0.79
CDH13-210ENST00000567445 ARHGEF35A5YM69 484 aa10.13□□□□□ -0.79
CDH13-210ENST00000567445 TGM5O43548 720 aa10.13□□□□□ -0.79
CDH13-210ENST00000567445 N4BP1O75113 896 aaKnown RBP10.13□□□□□ -0.79
CDH13-210ENST00000567445 TADA2AO75478 443 aa10.13□□□□□ -0.79
CDH13-210ENST00000567445 RFPL2O75678 378 aa10.13□□□□□ -0.79
CDH13-210ENST00000567445 PAPLNO95428 1278 aa10.13□□□□□ -0.79
CDH13-210ENST00000567445 SPATA31D3P0C874 917 aa10.13□□□□□ -0.79
CDH13-210ENST00000567445 MUTP22033 750 aa10.13□□□□□ -0.79
CDH13-210ENST00000567445 NAMPTP43490 491 aa10.13□□□□□ -0.79
CDH13-210ENST00000567445 TRAPPC10P48553 1259 aa10.13□□□□□ -0.79
CDH13-210ENST00000567445 HMGN5P82970 282 aaKnown RBP10.13□□□□□ -0.79
CDH13-210ENST00000567445 PRPF4BQ13523 1007 aaKnown RBP10.13□□□□□ -0.79
CDH13-210ENST00000567445 HSP90AA2PQ14568 343 aaPredicted RBP10.13□□□□□ -0.79
CDH13-210ENST00000567445 TTC38Q5R3I4 469 aa10.13□□□□□ -0.79
CDH13-210ENST00000567445 SPATA31D4Q6ZUB0 917 aa10.13□□□□□ -0.79
CDH13-210ENST00000567445 PALB2Q86YC2 1186 aa10.13□□□□□ -0.79
CDH13-210ENST00000567445 NOSTRINQ8IVI9 506 aa10.13□□□□□ -0.79
CDH13-210ENST00000567445 TMEM105Q8N8V8 129 aa10.13□□□□□ -0.79
CDH13-210ENST00000567445 DEPTORQ8TB45 409 aa10.13□□□□□ -0.79
CDH13-210ENST00000567445 RIN2Q8WYP3 895 aaPredicted RBP10.13□□□□□ -0.79
CDH13-210ENST00000567445 SMG7Q92540 1137 aaKnown RBP10.13□□□□□ -0.79
CDH13-210ENST00000567445 RABGGTAQ92696 567 aa10.13□□□□□ -0.79
CDH13-210ENST00000567445 ATOH1Q92858 354 aaPredicted RBP10.13□□□□□ -0.79
CDH13-210ENST00000567445 GLMNQ92990 594 aa10.13□□□□□ -0.79
CDH13-210ENST00000567445 CCDC113Q9H0I3 377 aa10.13□□□□□ -0.79
CDH13-210ENST00000567445 IGSF9Q9P2J2 1179 aa10.13□□□□□ -0.79
CDH13-210ENST00000567445 MTCL1Q9Y4B5 1905 aaKnown RBP10.13□□□□□ -0.79
CDH13-210ENST00000567445 CLUHO75153 1309 aa10.12□□□□□ -0.79
CDH13-210ENST00000567445 ZFHX2Q9C0A1 2572 aaPredicted RBP10.12□□□□□ -0.79
CDH13-210ENST00000567445 H0Y858 1186 aa10.12□□□□□ -0.79
CDH13-210ENST00000567445 ACKR2O00590 384 aa10.12□□□□□ -0.79
CDH13-210ENST00000567445 PRKCBP05771 671 aa10.12□□□□□ -0.79
CDH13-210ENST00000567445 MYBP10242 640 aa10.12□□□□□ -0.79
CDH13-210ENST00000567445 GBP2P32456 591 aaPredicted RBP10.12□□□□□ -0.79
CDH13-210ENST00000567445 CLCN5P51795 746 aa10.12□□□□□ -0.79
CDH13-210ENST00000567445 EFNA5P52803 228 aa10.12□□□□□ -0.79
CDH13-210ENST00000567445 GNL2Q13823 731 aaKnown RBP10.12□□□□□ -0.79
CDH13-210ENST00000567445 PPP2R5AQ15172 486 aa10.12□□□□□ -0.79
CDH13-210ENST00000567445 TMEM259Q4ZIN3 620 aa10.12□□□□□ -0.79
CDH13-210ENST00000567445 LILRA6Q6PI73 481 aa10.12□□□□□ -0.79
CDH13-210ENST00000567445 ZNF707Q96C28 371 aaPredicted RBP10.12□□□□□ -0.79
CDH13-210ENST00000567445 ZSCAN31Q96LW9 406 aaPredicted RBP10.12□□□□□ -0.79
CDH13-210ENST00000567445 PAAF1Q9BRP4 392 aa10.12□□□□□ -0.79
CDH13-210ENST00000567445 ADPGKQ9BRR6 497 aa10.12□□□□□ -0.79
CDH13-210ENST00000567445 NT5C3AQ9H0P0 336 aa10.12□□□□□ -0.79
CDH13-210ENST00000567445 SH2B1Q9NRF2 756 aaPredicted RBP10.12□□□□□ -0.79
CDH13-210ENST00000567445 FAM86C1Q9NVL1 165 aa10.12□□□□□ -0.79
CDH13-210ENST00000567445 ZDHHC7Q9NXF8 308 aa10.12□□□□□ -0.79
CDH13-210ENST00000567445 SNTG2Q9NY99 539 aa10.12□□□□□ -0.79
CDH13-210ENST00000567445 EPS15L1Q9UBC2 864 aa10.12□□□□□ -0.79
CDH13-210ENST00000567445 CACNG4Q9UBN1 327 aa10.12□□□□□ -0.79
CDH13-210ENST00000567445 DUSP12Q9UNI6 340 aa10.12□□□□□ -0.79
CDH13-210ENST00000567445 CASTOR2A6NHX0 329 aa10.11□□□□□ -0.79
CDH13-210ENST00000567445 PTGESO14684 152 aa10.11□□□□□ -0.79
CDH13-210ENST00000567445 RECQL4O94761 1208 aa10.11□□□□□ -0.79
CDH13-210ENST00000567445 KIF4AO95239 1232 aa10.11□□□□□ -0.79
CDH13-210ENST00000567445 THP07101 528 aa10.11□□□□□ -0.79
CDH13-210ENST00000567445 RPL17P18621 184 aaKnown RBP10.11□□□□□ -0.79
CDH13-210ENST00000567445 LIG1P18858 919 aa10.11□□□□□ -0.79
CDH13-210ENST00000567445 CCT6AP40227 531 aaKnown RBP10.11□□□□□ -0.79
CDH13-210ENST00000567445 PRR20EP86478 221 aa10.11□□□□□ -0.79
CDH13-210ENST00000567445 PRR20CP86479 221 aa10.11□□□□□ -0.79
CDH13-210ENST00000567445 PRR20DP86480 221 aa10.11□□□□□ -0.79
CDH13-210ENST00000567445 PRR20BP86481 221 aa10.11□□□□□ -0.79
CDH13-210ENST00000567445 PRR20AP86496 221 aa10.11□□□□□ -0.79
CDH13-210ENST00000567445 RTP2Q5QGT7 225 aa10.11□□□□□ -0.79
CDH13-210ENST00000567445 PRSS55Q6UWB4 352 aaPredicted RBP10.11□□□□□ -0.79
CDH13-210ENST00000567445 GLYCTKQ8IVS8 523 aa10.11□□□□□ -0.79
CDH13-210ENST00000567445 C4orf32Q8N8J7 132 aa10.11□□□□□ -0.79
CDH13-210ENST00000567445 FAM184AQ8NB25 1140 aa10.11□□□□□ -0.79
CDH13-210ENST00000567445 HASPINQ8TF76 798 aa10.11□□□□□ -0.79
CDH13-210ENST00000567445 KIFAP3Q92845 792 aa10.11□□□□□ -0.79
CDH13-210ENST00000567445 IFT74Q96LB3 600 aa10.11□□□□□ -0.79
CDH13-210ENST00000567445 TTPALQ9BTX7 342 aa10.11□□□□□ -0.79
CDH13-210ENST00000567445 BHMT2Q9H2M3 363 aa10.11□□□□□ -0.79
CDH13-210ENST00000567445 PIDD1Q9HB75 910 aa10.11□□□□□ -0.79
CDH13-210ENST00000567445 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.11□□□□□ -0.79
CDH13-210ENST00000567445 LRWD1Q9UFC0 647 aa10.11□□□□□ -0.79
CDH13-210ENST00000567445 FBXL21Q9UKT6 434 aa10.11□□□□□ -0.79
CDH13-210ENST00000567445 NOL7Q9UMY1 257 aaKnown RBP10.11□□□□□ -0.79
CDH13-210ENST00000567445 DOCK8Q8NF50 2099 aa10.11□□□□□ -0.79
CDH13-210ENST00000567445 PTPRZ1P23471 2315 aaPredicted RBP10.11□□□□□ -0.79
CDH13-210ENST00000567445 MYO15AQ9UKN7 3530 aa10.11□□□□□ -0.79
CDH13-210ENST00000567445 EDN1P05305 212 aa10.1□□□□□ -0.79
CDH13-210ENST00000567445 USP46P62068 366 aa10.1□□□□□ -0.79
CDH13-210ENST00000567445 ELAVL2Q12926 359 aaKnown RBP10.1□□□□□ -0.79
CDH13-210ENST00000567445 PDIA5Q14554 519 aa10.1□□□□□ -0.79
CDH13-210ENST00000567445 NAB2Q15742 525 aa10.1□□□□□ -0.79
CDH13-210ENST00000567445 ECM1Q16610 540 aa10.1□□□□□ -0.79
CDH13-210ENST00000567445 DCAF4L1Q3SXM0 396 aa10.1□□□□□ -0.79
CDH13-210ENST00000567445 MSS51Q4VC12 460 aa10.1□□□□□ -0.79
CDH13-210ENST00000567445 FAM171A1Q5VUB5 890 aa10.1□□□□□ -0.79
CDH13-210ENST00000567445 EEF1DP3Q658K8 133 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms