RNA–Protein interactions for RNA: ENST00000567406.5

CDR2-206, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 4

Gene CDR2, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-206ENST00000567406 C1RP00736 705 aa16.77■□□□□ 0.28
CDR2-206ENST00000567406 HTR4Q13639 388 aa16.77■□□□□ 0.28
CDR2-206ENST00000567406 UPP1Q16831 310 aa16.77■□□□□ 0.28
CDR2-206ENST00000567406 ZNF568Q3ZCX4 644 aa16.77■□□□□ 0.28
CDR2-206ENST00000567406 AXDND1Q5T1B0 1012 aaPredicted RBP16.77■□□□□ 0.28
CDR2-206ENST00000567406 DCLRE1AQ6PJP8 1040 aa16.77■□□□□ 0.28
CDR2-206ENST00000567406 PARM1Q6UWI2 310 aa16.77■□□□□ 0.28
CDR2-206ENST00000567406 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.77■□□□□ 0.28
CDR2-206ENST00000567406 FGF14Q92915 247 aa16.77■□□□□ 0.28
CDR2-206ENST00000567406 C18orf25Q96B23 403 aaPredicted RBP16.77■□□□□ 0.28
CDR2-206ENST00000567406 RAB34Q9BZG1 259 aa16.77■□□□□ 0.28
CDR2-206ENST00000567406 PTPRHQ9HD43 1115 aa16.77■□□□□ 0.28
CDR2-206ENST00000567406 WNT16Q9UBV4 365 aa16.77■□□□□ 0.28
CDR2-206ENST00000567406 CDY1Q9Y6F8 540 aa16.77■□□□□ 0.28
CDR2-206ENST00000567406 PHLPP2Q6ZVD8 1323 aa16.76■□□□□ 0.27
CDR2-206ENST00000567406 NPHP3-ACAD11A0A0J9YXS1 232 aa16.76■□□□□ 0.27
CDR2-206ENST00000567406 ANHXE9PGG2 379 aa16.76■□□□□ 0.27
CDR2-206ENST00000567406 ST18O60284 1047 aa16.76■□□□□ 0.27
CDR2-206ENST00000567406 CD2BP2O95400 341 aaKnown RBP16.76■□□□□ 0.27
CDR2-206ENST00000567406 SRFP11831 508 aa16.76■□□□□ 0.27
CDR2-206ENST00000567406 GRM5P41594 1212 aa16.76■□□□□ 0.27
CDR2-206ENST00000567406 CACNB1Q02641 598 aaPredicted RBP16.76■□□□□ 0.27
CDR2-206ENST00000567406 ELAVL2Q12926 359 aaKnown RBP16.76■□□□□ 0.27
CDR2-206ENST00000567406 DMP1Q13316 513 aaPredicted RBP16.76■□□□□ 0.27
CDR2-206ENST00000567406 SPECC1Q5M775 1068 aa16.76■□□□□ 0.27
CDR2-206ENST00000567406 ALKAL1Q6UXT8 129 aa16.76■□□□□ 0.27
CDR2-206ENST00000567406 CCDC105Q8IYK2 499 aa16.76■□□□□ 0.27
CDR2-206ENST00000567406 DTWD2Q8NBA8 298 aa16.76■□□□□ 0.27
CDR2-206ENST00000567406 DDX27Q96GQ7 796 aaKnown RBP16.76■□□□□ 0.27
CDR2-206ENST00000567406 PNMA5Q96PV4 448 aa16.76■□□□□ 0.27
CDR2-206ENST00000567406 TCHPQ9BT92 498 aa16.76■□□□□ 0.27
CDR2-206ENST00000567406 CCDC94Q9BW85 323 aaPredicted RBP16.76■□□□□ 0.27
CDR2-206ENST00000567406 MRPL4Q9BYD3 311 aaKnown RBP16.76■□□□□ 0.27
CDR2-206ENST00000567406 TMEM134Q9H6X4 195 aa16.76■□□□□ 0.27
CDR2-206ENST00000567406 TBC1D17Q9HA65 648 aa16.76■□□□□ 0.27
CDR2-206ENST00000567406 ARHGAP28Q9P2N2 729 aa16.76■□□□□ 0.27
CDR2-206ENST00000567406 RIF1Q5UIP0 2472 aaKnown RBP16.76■□□□□ 0.27
CDR2-206ENST00000567406 NOTCH4Q99466 2003 aa16.75■□□□□ 0.27
CDR2-206ENST00000567406 WDR87Q6ZQQ6 2873 aa16.75■□□□□ 0.27
CDR2-206ENST00000567406 ABLIM1O14639 778 aa16.75■□□□□ 0.27
CDR2-206ENST00000567406 DCNP07585 359 aaKnown RBP16.75■□□□□ 0.27
CDR2-206ENST00000567406 RFX1P22670 979 aa16.75■□□□□ 0.27
CDR2-206ENST00000567406 YARSP54577 528 aaKnown RBP16.75■□□□□ 0.27
CDR2-206ENST00000567406 ARPP19P56211 112 aa16.75■□□□□ 0.27
CDR2-206ENST00000567406 GPC5P78333 572 aa16.75■□□□□ 0.27
CDR2-206ENST00000567406 RAB33AQ14088 237 aa16.75■□□□□ 0.27
CDR2-206ENST00000567406 ANGPT1Q15389 498 aa16.75■□□□□ 0.27
CDR2-206ENST00000567406 ING5Q8WYH8 240 aa16.75■□□□□ 0.27
CDR2-206ENST00000567406 FGF13Q92913 245 aa16.75■□□□□ 0.27
CDR2-206ENST00000567406 DNMT3BQ9UBC3 853 aaKnown RBP16.75■□□□□ 0.27
CDR2-206ENST00000567406 MTRRQ9UBK8 725 aa16.75■□□□□ 0.27
CDR2-206ENST00000567406 CDH7Q9ULB5 785 aa16.75■□□□□ 0.27
CDR2-206ENST00000567406 COL4A3Q01955 1670 aa16.75■□□□□ 0.27
CDR2-206ENST00000567406 VWA3AA6NCI4 1184 aa16.74■□□□□ 0.27
CDR2-206ENST00000567406 PROB1E7EW31 1015 aa16.74■□□□□ 0.27
CDR2-206ENST00000567406 TMEM189-UBE2V1I3L0A0 370 aa16.74■□□□□ 0.27
CDR2-206ENST00000567406 PODXLO00592 558 aa16.74■□□□□ 0.27
CDR2-206ENST00000567406 HNRNPA1P09651 372 aaKnown RBP eCLIP16.74■□□□□ 0.27
CDR2-206ENST00000567406 PRPHP41219 470 aa16.74■□□□□ 0.27
CDR2-206ENST00000567406 NBL1P41271 181 aa16.74■□□□□ 0.27
CDR2-206ENST00000567406 XKR4Q5GH76 650 aa16.74■□□□□ 0.27
CDR2-206ENST00000567406 POTEHQ6S545 545 aa16.74■□□□□ 0.27
CDR2-206ENST00000567406 APBB1IPQ7Z5R6 666 aaPredicted RBP16.74■□□□□ 0.27
CDR2-206ENST00000567406 NXPE3Q969Y0 559 aa16.74■□□□□ 0.27
CDR2-206ENST00000567406 SNX27Q96L92 541 aa16.74■□□□□ 0.27
CDR2-206ENST00000567406 DRC1Q96MC2 740 aa16.74■□□□□ 0.27
CDR2-206ENST00000567406 ACAP3Q96P50 834 aa16.74■□□□□ 0.27
CDR2-206ENST00000567406 RTP3Q9BQQ7 232 aa16.74■□□□□ 0.27
CDR2-206ENST00000567406 FOXQ1Q9C009 403 aa16.74■□□□□ 0.27
CDR2-206ENST00000567406 ANKFY1Q9P2R3 1169 aa16.74■□□□□ 0.27
CDR2-206ENST00000567406 STK24Q9Y6E0 443 aa16.74■□□□□ 0.27
CDR2-206ENST00000567406 PRR23AA6NEV1 266 aa16.73■□□□□ 0.27
CDR2-206ENST00000567406 LAD1O00515 517 aa16.73■□□□□ 0.27
CDR2-206ENST00000567406 XYLBO75191 536 aa16.73■□□□□ 0.27
CDR2-206ENST00000567406 LRRN2O75325 713 aa16.73■□□□□ 0.27
CDR2-206ENST00000567406 PROZP22891 400 aa16.73■□□□□ 0.27
CDR2-206ENST00000567406 GJB2P29033 226 aa16.73■□□□□ 0.27
CDR2-206ENST00000567406 ATP2C1P98194 919 aaPredicted RBP16.73■□□□□ 0.27
CDR2-206ENST00000567406 SPAG1Q07617 926 aa16.73■□□□□ 0.27
CDR2-206ENST00000567406 VARS2Q5ST30 1063 aaKnown RBP16.73■□□□□ 0.27
CDR2-206ENST00000567406 PDXDC1Q6P996 788 aa16.73■□□□□ 0.27
CDR2-206ENST00000567406 MPZL3Q6UWV2 235 aa16.73■□□□□ 0.27
CDR2-206ENST00000567406 TMX3Q96JJ7 454 aa16.73■□□□□ 0.27
CDR2-206ENST00000567406 UROC1Q96N76 676 aa16.73■□□□□ 0.27
CDR2-206ENST00000567406 KXD1Q9BQD3 176 aa16.73■□□□□ 0.27
CDR2-206ENST00000567406 TOPORSQ9NS56 1045 aaPredicted RBP16.73■□□□□ 0.27
CDR2-206ENST00000567406 MYH15Q9Y2K3 1946 aa16.72■□□□□ 0.27
CDR2-206ENST00000567406 MCF2P10911 925 aa16.72■□□□□ 0.27
CDR2-206ENST00000567406 SNW1Q13573 536 aaKnown RBP16.72■□□□□ 0.27
CDR2-206ENST00000567406 RABEP1Q15276 862 aa16.72■□□□□ 0.27
CDR2-206ENST00000567406 SLC5A9Q2M3M2 681 aa16.72■□□□□ 0.27
CDR2-206ENST00000567406 PABPC1LQ4VXU2 614 aaKnown RBP16.72■□□□□ 0.27
CDR2-206ENST00000567406 ANKS3Q6ZW76 656 aa16.72■□□□□ 0.27
CDR2-206ENST00000567406 TMEM161BQ8NDZ6 487 aa16.72■□□□□ 0.27
CDR2-206ENST00000567406 MCRS1Q96EZ8 462 aa16.72■□□□□ 0.27
CDR2-206ENST00000567406 HAPLN2Q9GZV7 340 aa16.72■□□□□ 0.27
CDR2-206ENST00000567406 ARHGEF3Q9NR81 526 aa16.72■□□□□ 0.27
CDR2-206ENST00000567406 RBM19Q9Y4C8 960 aaKnown RBP16.72■□□□□ 0.27
CDR2-206ENST00000567406 BACE2Q9Y5Z0 518 aa16.72■□□□□ 0.27
CDR2-206ENST00000567406 FAM186AA6NE01 2351 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms