RNA–Protein interactions for RNA: ENST00000567271.1

NME3-210, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-210ENST00000567271 GARTP22102 1010 aa23.56■■□□□ 1.36
NME3-210ENST00000567271 ACOT2P49753 483 aa23.56■■□□□ 1.36
NME3-210ENST00000567271 CLCNKBP51801 687 aa23.56■■□□□ 1.36
NME3-210ENST00000567271 TFF2Q03403 129 aa23.56■■□□□ 1.36
NME3-210ENST00000567271 SNW1Q13573 536 aaKnown RBP23.56■■□□□ 1.36
NME3-210ENST00000567271 DUSP6Q16828 381 aa23.56■■□□□ 1.36
NME3-210ENST00000567271 KMT5BQ4FZB7 885 aa23.56■■□□□ 1.36
NME3-210ENST00000567271 FUT10Q6P4F1 479 aa23.56■■□□□ 1.36
NME3-210ENST00000567271 ENGASEQ8NFI3 743 aa23.56■■□□□ 1.36
NME3-210ENST00000567271 SCFD1Q8WVM8 642 aa23.56■■□□□ 1.36
NME3-210ENST00000567271 AUTS2Q8WXX7 1259 aa23.56■■□□□ 1.36
NME3-210ENST00000567271 CDCA3Q99618 268 aaPredicted RBP23.56■■□□□ 1.36
NME3-210ENST00000567271 HERC2P3Q9BVR0 1158 aa23.56■■□□□ 1.36
NME3-210ENST00000567271 GPR62Q9BZJ7 368 aa23.56■■□□□ 1.36
NME3-210ENST00000567271 GOLGA2P5Q9HBQ8 144 aa23.56■■□□□ 1.36
NME3-210ENST00000567271 SLC39A2Q9NP94 309 aa23.56■■□□□ 1.36
NME3-210ENST00000567271 CLDND1Q9NY35 253 aa23.56■■□□□ 1.36
NME3-210ENST00000567271 LINC01565O15544 149 aa23.55■■□□□ 1.36
NME3-210ENST00000567271 PRR29P0C7W0 189 aa23.55■■□□□ 1.36
NME3-210ENST00000567271 MRPS5P82675 430 aaKnown RBP23.55■■□□□ 1.36
NME3-210ENST00000567271 POU5F1Q01860 360 aaKnown RBP23.55■■□□□ 1.36
NME3-210ENST00000567271 PPP2R3AQ06190 1150 aa23.55■■□□□ 1.36
NME3-210ENST00000567271 DPYDQ12882 1025 aa23.55■■□□□ 1.36
NME3-210ENST00000567271 PTPN14Q15678 1187 aa23.55■■□□□ 1.36
NME3-210ENST00000567271 UPP1Q16831 310 aa23.55■■□□□ 1.36
NME3-210ENST00000567271 DCLRE1AQ6PJP8 1040 aa23.55■■□□□ 1.36
NME3-210ENST00000567271 CRELD2Q6UXH1 353 aaPredicted RBP23.55■■□□□ 1.36
NME3-210ENST00000567271 CD302Q8IX05 232 aa23.55■■□□□ 1.36
NME3-210ENST00000567271 C18orf25Q96B23 403 aaPredicted RBP23.55■■□□□ 1.36
NME3-210ENST00000567271 DDX27Q96GQ7 796 aaKnown RBP23.55■■□□□ 1.36
NME3-210ENST00000567271 EXOC1Q9NV70 894 aa23.55■■□□□ 1.36
NME3-210ENST00000567271 UBE4BO95155 1302 aa23.55■■□□□ 1.36
NME3-210ENST00000567271 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP23.54■■□□□ 1.36
NME3-210ENST00000567271 TMEM189-UBE2V1I3L0A0 370 aa23.54■■□□□ 1.36
NME3-210ENST00000567271 LILRB3O75022 631 aa23.54■■□□□ 1.36
NME3-210ENST00000567271 RPN1P04843 607 aaKnown RBP23.54■■□□□ 1.36
NME3-210ENST00000567271 KCNA5P22460 613 aa23.54■■□□□ 1.36
NME3-210ENST00000567271 CA8P35219 290 aa23.54■■□□□ 1.36
NME3-210ENST00000567271 LTBRP36941 435 aa23.54■■□□□ 1.36
NME3-210ENST00000567271 FAM160A1Q05DH4 1040 aa23.54■■□□□ 1.36
NME3-210ENST00000567271 SPAG1Q07617 926 aa23.54■■□□□ 1.36
NME3-210ENST00000567271 PSMD2Q13200 908 aa23.54■■□□□ 1.36
NME3-210ENST00000567271 ZBTB6Q15916 424 aa23.54■■□□□ 1.36
NME3-210ENST00000567271 KANK3Q6NY19 840 aa23.54■■□□□ 1.36
NME3-210ENST00000567271 EP400NLQ6ZTU2 488 aa23.54■■□□□ 1.36
NME3-210ENST00000567271 HASPINQ8TF76 798 aa23.54■■□□□ 1.36
NME3-210ENST00000567271 ASB2Q96Q27 587 aa23.54■■□□□ 1.36
NME3-210ENST00000567271 TSPAN18Q96SJ8 248 aa23.54■■□□□ 1.36
NME3-210ENST00000567271 CBWD1Q9BRT8 395 aa23.54■■□□□ 1.36
NME3-210ENST00000567271 CHST7Q9NS84 486 aa23.54■■□□□ 1.36
NME3-210ENST00000567271 FSD2A1L4K1 749 aa23.53■■□□□ 1.36
NME3-210ENST00000567271 B3GAT3O94766 335 aa23.53■■□□□ 1.36
NME3-210ENST00000567271 IGFBP6P24592 240 aaPredicted RBP23.53■■□□□ 1.36
NME3-210ENST00000567271 RPL9P32969 192 aaKnown RBP23.53■■□□□ 1.36
NME3-210ENST00000567271 STK4Q13043 487 aa23.53■■□□□ 1.36
NME3-210ENST00000567271 BMT2Q1RMZ1 405 aa23.53■■□□□ 1.36
NME3-210ENST00000567271 AAK1Q2M2I8 961 aa23.53■■□□□ 1.36
NME3-210ENST00000567271 USP41Q3LFD5 358 aa23.53■■□□□ 1.36
NME3-210ENST00000567271 KIAA0319Q5VV43 1072 aa23.53■■□□□ 1.36
NME3-210ENST00000567271 CD300LGQ6UXG3 332 aa23.53■■□□□ 1.36
NME3-210ENST00000567271 FAM212AQ96EL1 285 aa23.53■■□□□ 1.36
NME3-210ENST00000567271 KIF12Q96FN5 646 aa23.53■■□□□ 1.36
NME3-210ENST00000567271 CCDC34Q96HJ3 373 aa23.53■■□□□ 1.36
NME3-210ENST00000567271 MRPL17Q9NRX2 175 aaKnown RBP23.53■■□□□ 1.36
NME3-210ENST00000567271 SF3B1O75533 1304 aaKnown RBP eCLIP23.53■■□□□ 1.36
NME3-210ENST00000567271 PODXLO00592 558 aa23.52■■□□□ 1.36
NME3-210ENST00000567271 CLASP2O75122 1294 aaKnown RBP23.52■■□□□ 1.36
NME3-210ENST00000567271 LDHAP00338 332 aaKnown RBP23.52■■□□□ 1.36
NME3-210ENST00000567271 URODP06132 367 aa23.52■■□□□ 1.36
NME3-210ENST00000567271 GLUD2P49448 558 aa23.52■■□□□ 1.36
NME3-210ENST00000567271 DSG1Q02413 1049 aa23.52■■□□□ 1.36
NME3-210ENST00000567271 DLX2Q07687 328 aaPredicted RBP23.52■■□□□ 1.36
NME3-210ENST00000567271 KCNC3Q14003 757 aa23.52■■□□□ 1.36
NME3-210ENST00000567271 ARMCX5Q6P1M9 558 aa23.52■■□□□ 1.36
NME3-210ENST00000567271 NELFCDQ8IXH7 590 aa23.52■■□□□ 1.36
NME3-210ENST00000567271 TMEM87AQ8NBN3 555 aa23.52■■□□□ 1.36
NME3-210ENST00000567271 KIAA0895Q8NCT3 520 aa23.52■■□□□ 1.36
NME3-210ENST00000567271 ZSWIM2Q8NEG5 633 aa23.52■■□□□ 1.36
NME3-210ENST00000567271 VN1R2Q8NFZ6 395 aa23.52■■□□□ 1.36
NME3-210ENST00000567271 SAAL1Q96ER3 474 aa23.52■■□□□ 1.36
NME3-210ENST00000567271 FAM213AQ9BRX8 229 aa23.52■■□□□ 1.36
NME3-210ENST00000567271 PCIF1Q9H4Z3 704 aa23.52■■□□□ 1.36
NME3-210ENST00000567271 ASB7Q9H672 318 aa23.52■■□□□ 1.36
NME3-210ENST00000567271 TUBGCP4Q9UGJ1 667 aa23.52■■□□□ 1.36
NME3-210ENST00000567271 UBQLN1Q9UMX0 589 aaKnown RBP23.52■■□□□ 1.36
NME3-210ENST00000567271 SSX2IPQ9Y2D8 614 aa23.52■■□□□ 1.36
NME3-210ENST00000567271 GTF3C5Q9Y5Q8 519 aaPredicted RBP23.52■■□□□ 1.36
NME3-210ENST00000567271 A0A0C4DFX4 3053 aa23.52■■□□□ 1.36
NME3-210ENST00000567271 C2CD2LO14523 706 aa23.51■■□□□ 1.35
NME3-210ENST00000567271 TGFB1I1O43294 461 aa23.51■■□□□ 1.35
NME3-210ENST00000567271 GADD45BO75293 160 aaPredicted RBP23.51■■□□□ 1.35
NME3-210ENST00000567271 GLP2RO95838 553 aa23.51■■□□□ 1.35
NME3-210ENST00000567271 CYP3A5P20815 502 aa23.51■■□□□ 1.35
NME3-210ENST00000567271 LEXMQ3ZCV2 418 aa23.51■■□□□ 1.35
NME3-210ENST00000567271 KIAA1841Q6NSI8 718 aa23.51■■□□□ 1.35
NME3-210ENST00000567271 GPR65Q8IYL9 337 aa23.51■■□□□ 1.35
NME3-210ENST00000567271 C3orf58Q8NDZ4 430 aa23.51■■□□□ 1.35
NME3-210ENST00000567271 B3GALT6Q96L58 329 aa23.51■■□□□ 1.35
NME3-210ENST00000567271 PDCD11Q14690 1871 aaKnown RBP23.5■■□□□ 1.35
NME3-210ENST00000567271 H3BQ06 376 aaPredicted RBP23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms