RNA–Protein interactions for RNA: ENST00000566926.1

CLK3-218, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-218ENST00000566926 GPR65Q8IYL9 337 aa14.64□□□□□ -0.07
CLK3-218ENST00000566926 BCL7CQ8WUZ0 217 aaPredicted RBP14.64□□□□□ -0.07
CLK3-218ENST00000566926 CASP10Q92851 521 aa14.64□□□□□ -0.07
CLK3-218ENST00000566926 DNAJC19Q96DA6 116 aa14.64□□□□□ -0.07
CLK3-218ENST00000566926 ZBTB45Q96K62 511 aaPredicted RBP14.64□□□□□ -0.07
CLK3-218ENST00000566926 HERC2P3Q9BVR0 1158 aa14.64□□□□□ -0.07
CLK3-218ENST00000566926 MRPL44Q9H9J2 332 aaKnown RBP14.64□□□□□ -0.07
CLK3-218ENST00000566926 MARCH5Q9NX47 278 aa14.64□□□□□ -0.07
CLK3-218ENST00000566926 EXOC7Q9UPT5 735 aa14.64□□□□□ -0.07
CLK3-218ENST00000566926 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.64□□□□□ -0.07
CLK3-218ENST00000566926 GRXCR2A6NFK2 248 aa14.63□□□□□ -0.07
CLK3-218ENST00000566926 ABLIM1O14639 778 aa14.63□□□□□ -0.07
CLK3-218ENST00000566926 TBX10O75333 385 aa14.63□□□□□ -0.07
CLK3-218ENST00000566926 HOXB8P17481 243 aaPredicted RBP14.63□□□□□ -0.07
CLK3-218ENST00000566926 NMT1P30419 496 aaKnown RBP14.63□□□□□ -0.07
CLK3-218ENST00000566926 MRE11P49959 708 aa14.63□□□□□ -0.07
CLK3-218ENST00000566926 OSTNP61366 133 aa14.63□□□□□ -0.07
CLK3-218ENST00000566926 ELAVL2Q12926 359 aaKnown RBP14.63□□□□□ -0.07
CLK3-218ENST00000566926 COASYQ13057 564 aa14.63□□□□□ -0.07
CLK3-218ENST00000566926 SMAD4Q13485 552 aaKnown RBP14.63□□□□□ -0.07
CLK3-218ENST00000566926 PNOCQ13519 176 aa14.63□□□□□ -0.07
CLK3-218ENST00000566926 USP41Q3LFD5 358 aa14.63□□□□□ -0.07
CLK3-218ENST00000566926 XKR4Q5GH76 650 aa14.63□□□□□ -0.07
CLK3-218ENST00000566926 HERC4Q5GLZ8 1057 aaPredicted RBP14.63□□□□□ -0.07
CLK3-218ENST00000566926 SLFN12LQ6IEE8 588 aa14.63□□□□□ -0.07
CLK3-218ENST00000566926 FUT10Q6P4F1 479 aa14.63□□□□□ -0.07
CLK3-218ENST00000566926 ALKAL1Q6UXT8 129 aa14.63□□□□□ -0.07
CLK3-218ENST00000566926 STXBP4Q6ZWJ1 553 aa14.63□□□□□ -0.07
CLK3-218ENST00000566926 ZNF720Q7Z2F6 126 aa14.63□□□□□ -0.07
CLK3-218ENST00000566926 SFR1Q86XK3 245 aa14.63□□□□□ -0.07
CLK3-218ENST00000566926 MAP4K3Q8IVH8 894 aa14.63□□□□□ -0.07
CLK3-218ENST00000566926 CEP120Q8N960 986 aa14.63□□□□□ -0.07
CLK3-218ENST00000566926 MSLNLQ96KJ4 702 aa14.63□□□□□ -0.07
CLK3-218ENST00000566926 PPP1R10Q96QC0 940 aaKnown RBP14.63□□□□□ -0.07
CLK3-218ENST00000566926 FIZ1Q96SL8 496 aa14.63□□□□□ -0.07
CLK3-218ENST00000566926 PLEKHA5Q9HAU0 1116 aa14.63□□□□□ -0.07
CLK3-218ENST00000566926 OLFML3Q9NRN5 406 aa14.63□□□□□ -0.07
CLK3-218ENST00000566926 PANK4Q9NVE7 773 aa14.63□□□□□ -0.07
CLK3-218ENST00000566926 PCDHB13Q9Y5F0 798 aa14.63□□□□□ -0.07
CLK3-218ENST00000566926 SF3B1O75533 1304 aaKnown RBP eCLIP14.63□□□□□ -0.07
CLK3-218ENST00000566926 SMIM28A0A1B0GU29 152 aa14.62□□□□□ -0.07
CLK3-218ENST00000566926 CASTOR2A6NHX0 329 aa14.62□□□□□ -0.07
CLK3-218ENST00000566926 OGTO15294 1046 aa14.62□□□□□ -0.07
CLK3-218ENST00000566926 CLASP2O75122 1294 aaKnown RBP14.62□□□□□ -0.07
CLK3-218ENST00000566926 GLP2RO95838 553 aa14.62□□□□□ -0.07
CLK3-218ENST00000566926 CLTAP09496 248 aa14.62□□□□□ -0.07
CLK3-218ENST00000566926 KCNE1P15382 129 aa14.62□□□□□ -0.07
CLK3-218ENST00000566926 GLUD2P49448 558 aa14.62□□□□□ -0.07
CLK3-218ENST00000566926 NLRP12P59046 1061 aa14.62□□□□□ -0.07
CLK3-218ENST00000566926 CREMQ03060 361 aa14.62□□□□□ -0.07
CLK3-218ENST00000566926 DLX2Q07687 328 aaPredicted RBP14.62□□□□□ -0.07
CLK3-218ENST00000566926 DPYDQ12882 1025 aa14.62□□□□□ -0.07
CLK3-218ENST00000566926 PTPN14Q15678 1187 aa14.62□□□□□ -0.07
CLK3-218ENST00000566926 RNF168Q8IYW5 571 aaPredicted RBP14.62□□□□□ -0.07
CLK3-218ENST00000566926 MLKLQ8NB16 471 aa14.62□□□□□ -0.07
CLK3-218ENST00000566926 FAM200AQ8TCP9 573 aa14.62□□□□□ -0.07
CLK3-218ENST00000566926 DDX27Q96GQ7 796 aaKnown RBP14.62□□□□□ -0.07
CLK3-218ENST00000566926 SNX27Q96L92 541 aa14.62□□□□□ -0.07
CLK3-218ENST00000566926 TSPAN18Q96SJ8 248 aa14.62□□□□□ -0.07
CLK3-218ENST00000566926 C7orf25Q9BPX7 421 aa14.62□□□□□ -0.07
CLK3-218ENST00000566926 VN1R3Q9BXE9 311 aa14.62□□□□□ -0.07
CLK3-218ENST00000566926 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.62□□□□□ -0.07
CLK3-218ENST00000566926 CNTN3Q9P232 1028 aa14.62□□□□□ -0.07
CLK3-218ENST00000566926 PRKAG3Q9UGI9 489 aa14.62□□□□□ -0.07
CLK3-218ENST00000566926 DPP7Q9UHL4 492 aa14.62□□□□□ -0.07
CLK3-218ENST00000566926 PCDHA5Q9Y5H7 936 aa14.62□□□□□ -0.07
CLK3-218ENST00000566926 SPTBN5Q9NRC6 3674 aaKnown RBP14.62□□□□□ -0.07
CLK3-218ENST00000566926 ANK1P16157 1881 aa14.61□□□□□ -0.07
CLK3-218ENST00000566926 VWA8A3KMH1 1905 aa14.61□□□□□ -0.07
CLK3-218ENST00000566926 FRMD3A2A2Y4 597 aa14.61□□□□□ -0.07
CLK3-218ENST00000566926 TMEM189-UBE2V1I3L0A0 370 aa14.61□□□□□ -0.07
CLK3-218ENST00000566926 MBTPS2O43462 519 aa14.61□□□□□ -0.07
CLK3-218ENST00000566926 XPOTO43592 962 aaKnown RBP14.61□□□□□ -0.07
CLK3-218ENST00000566926 TRAPPC3O43617 180 aa14.61□□□□□ -0.07
CLK3-218ENST00000566926 GCNT3O95395 438 aa14.61□□□□□ -0.07
CLK3-218ENST00000566926 ADH1AP07327 375 aa14.61□□□□□ -0.07
CLK3-218ENST00000566926 KLRC2P26717 231 aa14.61□□□□□ -0.07
CLK3-218ENST00000566926 PPP1R2P41236 205 aa14.61□□□□□ -0.07
CLK3-218ENST00000566926 AFMP43652 599 aa14.61□□□□□ -0.07
CLK3-218ENST00000566926 DSG1Q02413 1049 aa14.61□□□□□ -0.07
CLK3-218ENST00000566926 KCNC3Q14003 757 aa14.61□□□□□ -0.07
CLK3-218ENST00000566926 KCNB1Q14721 858 aa14.61□□□□□ -0.07
CLK3-218ENST00000566926 NAB2Q15742 525 aa14.61□□□□□ -0.07
CLK3-218ENST00000566926 CLUL1Q15846 466 aa14.61□□□□□ -0.07
CLK3-218ENST00000566926 GLRA4Q5JXX5 417 aa14.61□□□□□ -0.07
CLK3-218ENST00000566926 ANKRD54Q6NXT1 300 aa14.61□□□□□ -0.07
CLK3-218ENST00000566926 LLGL2Q6P1M3 1020 aa14.61□□□□□ -0.07
CLK3-218ENST00000566926 PDXDC1Q6P996 788 aa14.61□□□□□ -0.07
CLK3-218ENST00000566926 ELMSAN1Q6PJG2 1045 aa14.61□□□□□ -0.07
CLK3-218ENST00000566926 DCLRE1AQ6PJP8 1040 aa14.61□□□□□ -0.07
CLK3-218ENST00000566926 CD302Q8IX05 232 aa14.61□□□□□ -0.07
CLK3-218ENST00000566926 SMRP1Q8NCR6 262 aa14.61□□□□□ -0.07
CLK3-218ENST00000566926 AUTS2Q8WXX7 1259 aa14.61□□□□□ -0.07
CLK3-218ENST00000566926 ACCSQ96QU6 501 aa14.61□□□□□ -0.07
CLK3-218ENST00000566926 BPIFA3Q9BQP9 254 aa14.61□□□□□ -0.07
CLK3-218ENST00000566926 MSTO1Q9BUK6 570 aa14.61□□□□□ -0.07
CLK3-218ENST00000566926 TRIM9Q9C026 710 aa14.61□□□□□ -0.07
CLK3-218ENST00000566926 CHST7Q9NS84 486 aa14.61□□□□□ -0.07
CLK3-218ENST00000566926 DZANK1Q9NVP4 752 aa14.61□□□□□ -0.07
CLK3-218ENST00000566926 CLEC1BQ9P126 229 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms