RNA–Protein interactions for RNA: ENST00000566811.5

RNF40-210, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-210ENST00000566811 UBE3AQ05086 875 aa22.04■■□□□ 1.12
RNF40-210ENST00000566811 PAK1Q13153 545 aa22.04■■□□□ 1.12
RNF40-210ENST00000566811 GRIN2CQ14957 1233 aa22.04■■□□□ 1.12
RNF40-210ENST00000566811 EPC2Q52LR7 807 aa22.04■■□□□ 1.12
RNF40-210ENST00000566811 KCNT2Q6UVM3 1135 aa22.04■■□□□ 1.12
RNF40-210ENST00000566811 FBXO22Q8NEZ5 403 aa22.04■■□□□ 1.12
RNF40-210ENST00000566811 MKNK1Q9BUB5 465 aa22.04■■□□□ 1.12
RNF40-210ENST00000566811 PCIF1Q9H4Z3 704 aa22.04■■□□□ 1.12
RNF40-210ENST00000566811 NRDE2Q9H7Z3 1164 aa22.04■■□□□ 1.12
RNF40-210ENST00000566811 UBQLN1Q9UMX0 589 aaKnown RBP22.04■■□□□ 1.12
RNF40-210ENST00000566811 PLXNA4Q9HCM2 1894 aa22.04■■□□□ 1.12
RNF40-210ENST00000566811 CLIC2O15247 247 aa22.03■■□□□ 1.12
RNF40-210ENST00000566811 BCAR1P56945 870 aa22.03■■□□□ 1.12
RNF40-210ENST00000566811 FKBP3Q00688 224 aaKnown RBP22.03■■□□□ 1.12
RNF40-210ENST00000566811 NAB2Q15742 525 aa22.03■■□□□ 1.12
RNF40-210ENST00000566811 SEZ6Q53EL9 994 aa22.03■■□□□ 1.12
RNF40-210ENST00000566811 ZBTB41Q5SVQ8 909 aa22.03■■□□□ 1.12
RNF40-210ENST00000566811 COLGALT2Q8IYK4 626 aa22.03■■□□□ 1.12
RNF40-210ENST00000566811 DDX27Q96GQ7 796 aaKnown RBP22.03■■□□□ 1.12
RNF40-210ENST00000566811 PRDM6Q9NQX0 595 aa22.03■■□□□ 1.12
RNF40-210ENST00000566811 LZTS1Q9Y250 596 aa22.03■■□□□ 1.12
RNF40-210ENST00000566811 MYO9BQ13459 2157 aa22.03■■□□□ 1.12
RNF40-210ENST00000566811 CHD7Q9P2D1 2997 aa22.03■■□□□ 1.12
RNF40-210ENST00000566811 ALDH2P05091 517 aa22.02■■□□□ 1.12
RNF40-210ENST00000566811 PAX3P23760 479 aa22.02■■□□□ 1.12
RNF40-210ENST00000566811 RPL9P32969 192 aaKnown RBP22.02■■□□□ 1.12
RNF40-210ENST00000566811 AFF1P51825 1210 aaKnown RBP22.02■■□□□ 1.12
RNF40-210ENST00000566811 NLRP12P59046 1061 aa22.02■■□□□ 1.12
RNF40-210ENST00000566811 PLCB3Q01970 1234 aa22.02■■□□□ 1.12
RNF40-210ENST00000566811 TMEM132DQ14C87 1099 aa22.02■■□□□ 1.12
RNF40-210ENST00000566811 SASS6Q6UVJ0 657 aa22.02■■□□□ 1.12
RNF40-210ENST00000566811 KIF12Q96FN5 646 aa22.02■■□□□ 1.12
RNF40-210ENST00000566811 C17orf80Q9BSJ5 609 aa22.02■■□□□ 1.12
RNF40-210ENST00000566811 LMAN2LQ9H0V9 348 aa22.02■■□□□ 1.12
RNF40-210ENST00000566811 SPG21Q9NZD8 308 aa22.02■■□□□ 1.12
RNF40-210ENST00000566811 LACTBL1A8MY62 500 aa22.01■■□□□ 1.11
RNF40-210ENST00000566811 PPP1R3GB7ZBB8 358 aa22.01■■□□□ 1.11
RNF40-210ENST00000566811 H3BNC9 293 aa22.01■■□□□ 1.11
RNF40-210ENST00000566811 TMEM189-UBE2V1I3L0A0 370 aa22.01■■□□□ 1.11
RNF40-210ENST00000566811 CETN3O15182 167 aa22.01■■□□□ 1.11
RNF40-210ENST00000566811 SLC16A3O15427 465 aaKnown RBP22.01■■□□□ 1.11
RNF40-210ENST00000566811 DDHD2O94830 711 aa22.01■■□□□ 1.11
RNF40-210ENST00000566811 GALTP07902 379 aa22.01■■□□□ 1.11
RNF40-210ENST00000566811 KRT17Q04695 432 aa22.01■■□□□ 1.11
RNF40-210ENST00000566811 ADAM9Q13443 819 aa22.01■■□□□ 1.11
RNF40-210ENST00000566811 PSMD6Q15008 389 aa22.01■■□□□ 1.11
RNF40-210ENST00000566811 ISM2Q6H9L7 571 aa22.01■■□□□ 1.11
RNF40-210ENST00000566811 CAVIN1Q6NZI2 390 aaKnown RBP22.01■■□□□ 1.11
RNF40-210ENST00000566811 ZNF280BQ86YH2 543 aa22.01■■□□□ 1.11
RNF40-210ENST00000566811 ZC3H3Q8IXZ2 948 aaKnown RBP22.01■■□□□ 1.11
RNF40-210ENST00000566811 BEST2Q8NFU1 509 aa22.01■■□□□ 1.11
RNF40-210ENST00000566811 CACTINQ8WUQ7 758 aaKnown RBP22.01■■□□□ 1.11
RNF40-210ENST00000566811 TMEM169Q96HH4 297 aa22.01■■□□□ 1.11
RNF40-210ENST00000566811 CEP63Q96MT8 703 aa22.01■■□□□ 1.11
RNF40-210ENST00000566811 COLEC11Q9BWP8 271 aa22.01■■□□□ 1.11
RNF40-210ENST00000566811 MIOSQ9NXC5 875 aa22.01■■□□□ 1.11
RNF40-210ENST00000566811 TMEM63CQ9P1W3 806 aa22.01■■□□□ 1.11
RNF40-210ENST00000566811 RWDD2AQ9UIY3 292 aa22.01■■□□□ 1.11
RNF40-210ENST00000566811 PLAGL2Q9UPG8 496 aa22.01■■□□□ 1.11
RNF40-210ENST00000566811 FAN1Q9Y2M0 1017 aa22.01■■□□□ 1.11
RNF40-210ENST00000566811 GOLGA8IPA6NC78 632 aa22■■□□□ 1.11
RNF40-210ENST00000566811 GOLGA8JA6NMD2 632 aa22■■□□□ 1.11
RNF40-210ENST00000566811 ARHGEF15O94989 841 aa22■■□□□ 1.11
RNF40-210ENST00000566811 FGFR1OPO95684 399 aaKnown RBP22■■□□□ 1.11
RNF40-210ENST00000566811 ERCC5P28715 1186 aaPredicted RBP22■■□□□ 1.11
RNF40-210ENST00000566811 AP3M2P53677 418 aa22■■□□□ 1.11
RNF40-210ENST00000566811 CYP24A1Q07973 514 aa22■■□□□ 1.11
RNF40-210ENST00000566811 ZBTB6Q15916 424 aa22■■□□□ 1.11
RNF40-210ENST00000566811 GLRA4Q5JXX5 417 aa22■■□□□ 1.11
RNF40-210ENST00000566811 INTS8Q75QN2 995 aaKnown RBP22■■□□□ 1.11
RNF40-210ENST00000566811 CBWD2Q8IUF1 395 aa22■■□□□ 1.11
RNF40-210ENST00000566811 WDR49Q8IV35 697 aa22■■□□□ 1.11
RNF40-210ENST00000566811 SLC39A11Q8N1S5 342 aa22■■□□□ 1.11
RNF40-210ENST00000566811 NOC3LQ8WTT2 800 aaKnown RBP22■■□□□ 1.11
RNF40-210ENST00000566811 NELFBQ8WX92 580 aa22■■□□□ 1.11
RNF40-210ENST00000566811 ARNTL2Q8WYA1 636 aa22■■□□□ 1.11
RNF40-210ENST00000566811 FAM212AQ96EL1 285 aa22■■□□□ 1.11
RNF40-210ENST00000566811 MFSD14AQ96MC6 490 aa22■■□□□ 1.11
RNF40-210ENST00000566811 ZMAT2Q96NC0 199 aaKnown RBP22■■□□□ 1.11
RNF40-210ENST00000566811 FNBP1Q96RU3 617 aa22■■□□□ 1.11
RNF40-210ENST00000566811 ANO10Q9NW15 660 aa22■■□□□ 1.11
RNF40-210ENST00000566811 DNAJB4Q9UDY4 337 aa22■■□□□ 1.11
RNF40-210ENST00000566811 PUF60Q9UHX1 559 aaKnown RBP22■■□□□ 1.11
RNF40-210ENST00000566811 MEFVO15553 781 aaPredicted RBP21.99■■□□□ 1.11
RNF40-210ENST00000566811 CD44P16070 742 aaKnown RBP21.99■■□□□ 1.11
RNF40-210ENST00000566811 LRPAP1P30533 357 aa21.99■■□□□ 1.11
RNF40-210ENST00000566811 PSMC2P35998 433 aaKnown RBP21.99■■□□□ 1.11
RNF40-210ENST00000566811 OR1G1P47890 313 aa21.99■■□□□ 1.11
RNF40-210ENST00000566811 SLC11A1P49279 550 aa21.99■■□□□ 1.11
RNF40-210ENST00000566811 STX1AQ16623 288 aa21.99■■□□□ 1.11
RNF40-210ENST00000566811 SPATA1Q5VX52 437 aa21.99■■□□□ 1.11
RNF40-210ENST00000566811 JADE1Q6IE81 842 aa21.99■■□□□ 1.11
RNF40-210ENST00000566811 KLHL10Q6JEL2 608 aa21.99■■□□□ 1.11
RNF40-210ENST00000566811 IGSF21Q96ID5 467 aa21.99■■□□□ 1.11
RNF40-210ENST00000566811 LMCD1Q9NZU5 365 aa21.99■■□□□ 1.11
RNF40-210ENST00000566811 CTNND2Q9UQB3 1225 aa21.99■■□□□ 1.11
RNF40-210ENST00000566811 NRP1O14786 923 aa21.98■■□□□ 1.11
RNF40-210ENST00000566811 FGF18O76093 207 aa21.98■■□□□ 1.11
RNF40-210ENST00000566811 EPB41P11171 864 aaKnown RBP21.98■■□□□ 1.11
RNF40-210ENST00000566811 ELAVL2Q12926 359 aaKnown RBP21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms