RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 DRG2P55039 364 aaKnown RBP3.81□□□□□ -1.8
HERPUD1-211ENST00000566550 DCAF7P61962 342 aa3.81□□□□□ -1.8
HERPUD1-211ENST00000566550 RPS16P62249 146 aaKnown RBP3.81□□□□□ -1.8
HERPUD1-211ENST00000566550 SLC6A3Q01959 620 aa3.81□□□□□ -1.8
HERPUD1-211ENST00000566550 ADCY2Q08462 1091 aa3.81□□□□□ -1.8
HERPUD1-211ENST00000566550 TRPC3Q13507 836 aa3.81□□□□□ -1.8
HERPUD1-211ENST00000566550 SPARCL1Q14515 664 aa3.81□□□□□ -1.8
HERPUD1-211ENST00000566550 MYBPC3Q14896 1274 aa3.81□□□□□ -1.8
HERPUD1-211ENST00000566550 ADCK5Q3MIX3 580 aa3.81□□□□□ -1.8
HERPUD1-211ENST00000566550 TTC38Q5R3I4 469 aa3.81□□□□□ -1.8
HERPUD1-211ENST00000566550 FAM26FQ5R3K3 315 aa3.81□□□□□ -1.8
HERPUD1-211ENST00000566550 CDKAL1Q5VV42 579 aa3.81□□□□□ -1.8
HERPUD1-211ENST00000566550 FAM205BPQ63HN1 556 aa3.81□□□□□ -1.8
HERPUD1-211ENST00000566550 LIN54Q6MZP7 749 aa3.81□□□□□ -1.8
HERPUD1-211ENST00000566550 TMC6Q7Z403 805 aa3.81□□□□□ -1.8
HERPUD1-211ENST00000566550 WAPLQ7Z5K2 1190 aa3.81□□□□□ -1.8
HERPUD1-211ENST00000566550 TTC7BQ86TV6 843 aa3.81□□□□□ -1.8
HERPUD1-211ENST00000566550 MOGAT3Q86VF5 341 aa3.81□□□□□ -1.8
HERPUD1-211ENST00000566550 ZSCAN30Q86W11 494 aa3.81□□□□□ -1.8
HERPUD1-211ENST00000566550 FTSJ3Q8IY81 847 aaKnown RBP3.81□□□□□ -1.8
HERPUD1-211ENST00000566550 ADGRG2Q8IZP9 1017 aa3.81□□□□□ -1.8
HERPUD1-211ENST00000566550 MFSD4AQ8N468 514 aa3.81□□□□□ -1.8
HERPUD1-211ENST00000566550 ATP11CQ8NB49 1132 aa3.81□□□□□ -1.8
HERPUD1-211ENST00000566550 FANCBQ8NB91 859 aa3.81□□□□□ -1.8
HERPUD1-211ENST00000566550 SIMC1Q8NDZ2 872 aa3.81□□□□□ -1.8
HERPUD1-211ENST00000566550 OR2I1PQ8NGU4 316 aa3.81□□□□□ -1.8
HERPUD1-211ENST00000566550 OR14C36Q8NHC7 312 aa3.81□□□□□ -1.8
HERPUD1-211ENST00000566550 ANKS1AQ92625 1134 aa3.81□□□□□ -1.8
HERPUD1-211ENST00000566550 PAWRQ96IZ0 340 aaKnown RBP3.81□□□□□ -1.8
HERPUD1-211ENST00000566550 RSRC1Q96IZ7 334 aaKnown RBP3.81□□□□□ -1.8
HERPUD1-211ENST00000566550 CLPTM1LQ96KA5 538 aa3.81□□□□□ -1.8
HERPUD1-211ENST00000566550 C20orf173Q96LM9 149 aa3.81□□□□□ -1.8
HERPUD1-211ENST00000566550 ZMAT2Q96NC0 199 aaKnown RBP3.81□□□□□ -1.8
HERPUD1-211ENST00000566550 GBP4Q96PP9 640 aa3.81□□□□□ -1.8
HERPUD1-211ENST00000566550 VRK1Q99986 396 aaPredicted RBP3.81□□□□□ -1.8
HERPUD1-211ENST00000566550 C7orf25Q9BPX7 421 aa3.81□□□□□ -1.8
HERPUD1-211ENST00000566550 KATNAL1Q9BW62 490 aa3.81□□□□□ -1.8
HERPUD1-211ENST00000566550 STK32BQ9NY57 414 aa3.81□□□□□ -1.8
HERPUD1-211ENST00000566550 ORC3Q9UBD5 711 aaPredicted RBP3.81□□□□□ -1.8
HERPUD1-211ENST00000566550 FEZ2Q9UHY8 353 aaPredicted RBP3.81□□□□□ -1.8
HERPUD1-211ENST00000566550 SLC13A4Q9UKG4 626 aa3.81□□□□□ -1.8
HERPUD1-211ENST00000566550 PCDHA6Q9UN73 950 aa3.81□□□□□ -1.8
HERPUD1-211ENST00000566550 PCDHB1Q9Y5F3 818 aa3.81□□□□□ -1.8
HERPUD1-211ENST00000566550 CDY2AQ9Y6F7 541 aa3.81□□□□□ -1.8
HERPUD1-211ENST00000566550 NISCHQ9Y2I1 1504 aa3.8□□□□□ -1.8
HERPUD1-211ENST00000566550 CECR2Q9BXF3 1484 aa3.8□□□□□ -1.8
HERPUD1-211ENST00000566550 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP3.8□□□□□ -1.8
HERPUD1-211ENST00000566550 BICDL2A1A5D9 508 aa3.8□□□□□ -1.8
HERPUD1-211ENST00000566550 FAM234BA2RU67 622 aa3.8□□□□□ -1.8
HERPUD1-211ENST00000566550 PRAMEF22A3QJZ6 481 aa3.8□□□□□ -1.8
HERPUD1-211ENST00000566550 ETV2O00321 342 aaPredicted RBP3.8□□□□□ -1.8
HERPUD1-211ENST00000566550 PIP5K1BO14986 540 aa3.8□□□□□ -1.8
HERPUD1-211ENST00000566550 P4HA2O15460 535 aa3.8□□□□□ -1.8
HERPUD1-211ENST00000566550 HOXC11O43248 304 aaPredicted RBP3.8□□□□□ -1.8
HERPUD1-211ENST00000566550 PLOD3O60568 738 aa3.8□□□□□ -1.8
HERPUD1-211ENST00000566550 DDX58O95786 925 aaKnown RBP3.8□□□□□ -1.8
HERPUD1-211ENST00000566550 NDST3O95803 873 aa3.8□□□□□ -1.8
HERPUD1-211ENST00000566550 C4BPAP04003 597 aaKnown RBP3.8□□□□□ -1.8
HERPUD1-211ENST00000566550 DNTTP04053 509 aa3.8□□□□□ -1.8
HERPUD1-211ENST00000566550 JUPP14923 745 aa3.8□□□□□ -1.8
HERPUD1-211ENST00000566550 BMP7P18075 431 aa3.8□□□□□ -1.8
HERPUD1-211ENST00000566550 RXRAP19793 462 aa3.8□□□□□ -1.8
HERPUD1-211ENST00000566550 RPL10P27635 214 aaKnown RBP3.8□□□□□ -1.8
HERPUD1-211ENST00000566550 MCAMP43121 646 aa3.8□□□□□ -1.8
HERPUD1-211ENST00000566550 RGS3P49796 1198 aa3.8□□□□□ -1.8
HERPUD1-211ENST00000566550 HK3P52790 923 aa3.8□□□□□ -1.8
HERPUD1-211ENST00000566550 NR1H2P55055 460 aa3.8□□□□□ -1.8
HERPUD1-211ENST00000566550 LINC00310P59036 64 aa3.8□□□□□ -1.8
HERPUD1-211ENST00000566550 GRIN1Q05586 938 aa3.8□□□□□ -1.8
HERPUD1-211ENST00000566550 MAPK7Q13164 816 aa3.8□□□□□ -1.8
HERPUD1-211ENST00000566550 SLC12A1Q13621 1099 aa3.8□□□□□ -1.8
HERPUD1-211ENST00000566550 NFIXQ14938 502 aa3.8□□□□□ -1.8
HERPUD1-211ENST00000566550 SEPT2Q15019 361 aa3.8□□□□□ -1.8
HERPUD1-211ENST00000566550 SLC14A2Q15849 920 aa3.8□□□□□ -1.8
HERPUD1-211ENST00000566550 CDC37Q16543 378 aaPredicted RBP3.8□□□□□ -1.8
HERPUD1-211ENST00000566550 MEA1Q16626 185 aa3.8□□□□□ -1.8
HERPUD1-211ENST00000566550 FAM110CQ1W6H9 321 aa3.8□□□□□ -1.8
HERPUD1-211ENST00000566550 KHDC1LQ5JSQ8 128 aa3.8□□□□□ -1.8
HERPUD1-211ENST00000566550 HABP4Q5JVS0 413 aaKnown RBP3.8□□□□□ -1.8
HERPUD1-211ENST00000566550 FBXO47Q5MNV8 452 aa3.8□□□□□ -1.8
HERPUD1-211ENST00000566550 PRAMEF18Q5VWM3 479 aa3.8□□□□□ -1.8
HERPUD1-211ENST00000566550 SLFN12LQ6IEE8 588 aa3.8□□□□□ -1.8
HERPUD1-211ENST00000566550 KIAA1841Q6NSI8 718 aa3.8□□□□□ -1.8
HERPUD1-211ENST00000566550 CYP2R1Q6VVX0 501 aa3.8□□□□□ -1.8
HERPUD1-211ENST00000566550 CCDC129Q6ZRS4 1044 aa3.8□□□□□ -1.8
HERPUD1-211ENST00000566550 PNPLA5Q7Z6Z6 429 aaPredicted RBP3.8□□□□□ -1.8
HERPUD1-211ENST00000566550 CPOQ8IVL8 374 aa3.8□□□□□ -1.8
HERPUD1-211ENST00000566550 GLB1L3Q8NCI6 653 aaPredicted RBP3.8□□□□□ -1.8
HERPUD1-211ENST00000566550 C3orf20Q8ND61 904 aa3.8□□□□□ -1.8
HERPUD1-211ENST00000566550 NLGN2Q8NFZ4 835 aa3.8□□□□□ -1.8
HERPUD1-211ENST00000566550 OR10H5Q8NGA6 315 aa3.8□□□□□ -1.8
HERPUD1-211ENST00000566550 UHMK1Q8TAS1 419 aaKnown RBP3.8□□□□□ -1.8
HERPUD1-211ENST00000566550 ABHD4Q8TB40 342 aa3.8□□□□□ -1.8
HERPUD1-211ENST00000566550 AFG1LQ8WV93 481 aa3.8□□□□□ -1.8
HERPUD1-211ENST00000566550 ASB15Q8WXK1 588 aa3.8□□□□□ -1.8
HERPUD1-211ENST00000566550 FATE1Q969F0 183 aa3.8□□□□□ -1.8
HERPUD1-211ENST00000566550 ZUFSPQ96AP4 578 aa3.8□□□□□ -1.8
HERPUD1-211ENST00000566550 COX4I2Q96KJ9 171 aa3.8□□□□□ -1.8
HERPUD1-211ENST00000566550 KCNC2Q96PR1 638 aa3.8□□□□□ -1.8
HERPUD1-211ENST00000566550 P2RX7Q99572 595 aaKnown RBP3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms