RNA–Protein interactions for RNA: ENST00000566510.5

CDH1-209, Transcript of cadherin 1, humanhuman

TSL 5

Gene CDH1, Length 2,661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-209ENST00000566510 ZNF341Q9BYN7 854 aa15.2■□□□□ 0.02
CDH1-209ENST00000566510 ZBTB12Q9Y330 459 aaPredicted RBP15.2■□□□□ 0.02
CDH1-209ENST00000566510 GSTTP1A0A1W2PQM5 241 aa15.2■□□□□ 0.02
CDH1-209ENST00000566510 SNX3O60493 162 aa15.2■□□□□ 0.02
CDH1-209ENST00000566510 GH1P01241 217 aa15.2■□□□□ 0.02
CDH1-209ENST00000566510 RRM1P23921 792 aa15.2■□□□□ 0.02
CDH1-209ENST00000566510 GPC3P51654 580 aa15.2■□□□□ 0.02
CDH1-209ENST00000566510 NCKAP1LP55160 1127 aa15.2■□□□□ 0.02
CDH1-209ENST00000566510 DGKZQ13574 1117 aa15.2■□□□□ 0.02
CDH1-209ENST00000566510 CLEC16AQ2KHT3 1053 aa15.2■□□□□ 0.02
CDH1-209ENST00000566510 ZFYVE27Q5T4F4 411 aa15.2■□□□□ 0.02
CDH1-209ENST00000566510 SEPT14Q6ZU15 432 aa15.2■□□□□ 0.02
CDH1-209ENST00000566510 KRT27Q7Z3Y8 459 aa15.2■□□□□ 0.02
CDH1-209ENST00000566510 TEX2Q8IWB9 1127 aa15.2■□□□□ 0.02
CDH1-209ENST00000566510 C12orf50Q8NA57 414 aaPredicted RBP15.2■□□□□ 0.02
CDH1-209ENST00000566510 TMEM161BQ8NDZ6 487 aa15.2■□□□□ 0.02
CDH1-209ENST00000566510 DDX1Q92499 740 aaKnown RBP15.2■□□□□ 0.02
CDH1-209ENST00000566510 TAAR1Q96RJ0 339 aa15.2■□□□□ 0.02
CDH1-209ENST00000566510 FAM213AQ9BRX8 229 aa15.2■□□□□ 0.02
CDH1-209ENST00000566510 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.2■□□□□ 0.02
CDH1-209ENST00000566510 HNRNPDLO14979 420 aaKnown RBP15.19■□□□□ 0.02
CDH1-209ENST00000566510 MAPK13O15264 365 aa15.19■□□□□ 0.02
CDH1-209ENST00000566510 TP73O15350 636 aa15.19■□□□□ 0.02
CDH1-209ENST00000566510 UBOX5O94941 541 aa15.19■□□□□ 0.02
CDH1-209ENST00000566510 TTC4O95801 387 aa15.19■□□□□ 0.02
CDH1-209ENST00000566510 BRAFP15056 766 aa15.19■□□□□ 0.02
CDH1-209ENST00000566510 ATP5DP30049 168 aa15.19■□□□□ 0.02
CDH1-209ENST00000566510 PSMC5P62195 406 aa15.19■□□□□ 0.02
CDH1-209ENST00000566510 SP4Q02446 784 aa15.19■□□□□ 0.02
CDH1-209ENST00000566510 NEDD9Q14511 834 aa15.19■□□□□ 0.02
CDH1-209ENST00000566510 PREPLQ4J6C6 727 aaPredicted RBP15.19■□□□□ 0.02
CDH1-209ENST00000566510 SERPINB12Q96P63 405 aa15.19■□□□□ 0.02
CDH1-209ENST00000566510 HERPUD2Q9BSE4 406 aa15.19■□□□□ 0.02
CDH1-209ENST00000566510 CXorf56Q9H5V9 222 aa15.19■□□□□ 0.02
CDH1-209ENST00000566510 QTRT2Q9H974 415 aaKnown RBP15.19■□□□□ 0.02
CDH1-209ENST00000566510 TBC1D22BQ9NU19 505 aa15.19■□□□□ 0.02
CDH1-209ENST00000566510 SLC12A4Q9UP95 1085 aa15.19■□□□□ 0.02
CDH1-209ENST00000566510 R3HDM2Q9Y2K5 976 aaKnown RBP15.19■□□□□ 0.02
CDH1-209ENST00000566510 USP15Q9Y4E8 981 aaPredicted RBP15.19■□□□□ 0.02
CDH1-209ENST00000566510 ZNF536O15090 1300 aa15.19■□□□□ 0.02
CDH1-209ENST00000566510 MGRN1O60291 552 aa15.19■□□□□ 0.02
CDH1-209ENST00000566510 GRIN3BO60391 1043 aa15.19■□□□□ 0.02
CDH1-209ENST00000566510 ATP6V1G2O95670 118 aa15.19■□□□□ 0.02
CDH1-209ENST00000566510 TNFAIP8L3Q5GJ75 292 aa15.19■□□□□ 0.02
CDH1-209ENST00000566510 GSTA5Q7RTV2 222 aa15.19■□□□□ 0.02
CDH1-209ENST00000566510 PASD1Q8IV76 773 aa15.19■□□□□ 0.02
CDH1-209ENST00000566510 SRRM1Q8IYB3 904 aaKnown RBP15.19■□□□□ 0.02
CDH1-209ENST00000566510 PAIP2Q9BPZ3 127 aaKnown RBP15.19■□□□□ 0.02
CDH1-209ENST00000566510 CCDC134Q9H6E4 229 aa15.19■□□□□ 0.02
CDH1-209ENST00000566510 NOD2Q9HC29 1040 aa15.19■□□□□ 0.02
CDH1-209ENST00000566510 USTQ9Y2C2 406 aa15.19■□□□□ 0.02
CDH1-209ENST00000566510 PCNX4Q63HM2 1172 aa15.18■□□□□ 0.02
CDH1-209ENST00000566510 ZNF365Q70YC5 407 aa15.18■□□□□ 0.02
CDH1-209ENST00000566510 USP37Q86T82 979 aa15.18■□□□□ 0.02
CDH1-209ENST00000566510 PRUNE1Q86TP1 453 aa15.18■□□□□ 0.02
CDH1-209ENST00000566510 MCF2L2Q86YR7 1114 aa15.18■□□□□ 0.02
CDH1-209ENST00000566510 CLEC4DQ8WXI8 215 aa15.18■□□□□ 0.02
CDH1-209ENST00000566510 C1orf112Q9NSG2 853 aa15.18■□□□□ 0.02
CDH1-209ENST00000566510 AGAP1Q9UPQ3 857 aa15.18■□□□□ 0.02
CDH1-209ENST00000566510 CTDP1Q9Y5B0 961 aaPredicted RBP15.18■□□□□ 0.02
CDH1-209ENST00000566510 UBIAD1Q9Y5Z9 338 aa15.18■□□□□ 0.02
CDH1-209ENST00000566510 MROH7Q68CQ1 1323 aa15.18■□□□□ 0.02
CDH1-209ENST00000566510 C21orf2O43822 256 aa15.18■□□□□ 0.02
CDH1-209ENST00000566510 SUN1O94901 812 aa15.18■□□□□ 0.02
CDH1-209ENST00000566510 RALAP11233 206 aa15.18■□□□□ 0.02
CDH1-209ENST00000566510 SLC8A1P32418 973 aa15.18■□□□□ 0.02
CDH1-209ENST00000566510 STX2P32856 288 aa15.18■□□□□ 0.02
CDH1-209ENST00000566510 NSFP46459 744 aaKnown RBP15.18■□□□□ 0.02
CDH1-209ENST00000566510 VSTM1Q6UX27 236 aa15.18■□□□□ 0.02
CDH1-209ENST00000566510 C4orf19Q8IY42 314 aa15.18■□□□□ 0.02
CDH1-209ENST00000566510 MCOLN2Q8IZK6 566 aa15.18■□□□□ 0.02
CDH1-209ENST00000566510 GRK7Q8WTQ7 553 aa15.18■□□□□ 0.02
CDH1-209ENST00000566510 CEP170P1Q96L14 293 aa15.18■□□□□ 0.02
CDH1-209ENST00000566510 C9orf72Q96LT7 481 aa15.18■□□□□ 0.02
CDH1-209ENST00000566510 ST6GALNAC4Q9H4F1 302 aa15.18■□□□□ 0.02
CDH1-209ENST00000566510 USP20Q9Y2K6 914 aa15.18■□□□□ 0.02
CDH1-209ENST00000566510 O00370 1275 aa15.17■□□□□ 0.02
CDH1-209ENST00000566510 PMM2O15305 246 aa15.17■□□□□ 0.02
CDH1-209ENST00000566510 SORBS3O60504 671 aa15.17■□□□□ 0.02
CDH1-209ENST00000566510 CCNE2O96020 404 aa15.17■□□□□ 0.02
CDH1-209ENST00000566510 GSTA1P08263 222 aa15.17■□□□□ 0.02
CDH1-209ENST00000566510 PTGER2P43116 358 aa15.17■□□□□ 0.02
CDH1-209ENST00000566510 SNRPFP62306 86 aaKnown RBP15.17■□□□□ 0.02
CDH1-209ENST00000566510 RPS6P62753 249 aaKnown RBP15.17■□□□□ 0.02
CDH1-209ENST00000566510 MAP4K3Q8IVH8 894 aa15.17■□□□□ 0.02
CDH1-209ENST00000566510 CYP4X1Q8N118 509 aa15.17■□□□□ 0.02
CDH1-209ENST00000566510 ATL2Q8NHH9 583 aa15.17■□□□□ 0.02
CDH1-209ENST00000566510 SYTL5Q8TDW5 730 aaPredicted RBP15.17■□□□□ 0.02
CDH1-209ENST00000566510 BSNDQ8WZ55 320 aa15.17■□□□□ 0.02
CDH1-209ENST00000566510 RMDN3Q96TC7 470 aa15.17■□□□□ 0.02
CDH1-209ENST00000566510 TRAIPQ9BWF2 469 aa15.17■□□□□ 0.02
CDH1-209ENST00000566510 DCLK3Q9C098 648 aa15.17■□□□□ 0.02
CDH1-209ENST00000566510 COQ4Q9Y3A0 265 aa15.17■□□□□ 0.02
CDH1-209ENST00000566510 WDR64B1ANS9 1081 aa15.17■□□□□ 0.02
CDH1-209ENST00000566510 RPSAP08865 295 aaKnown RBP15.17■□□□□ 0.02
CDH1-209ENST00000566510 TNNI1P19237 187 aa15.17■□□□□ 0.02
CDH1-209ENST00000566510 CYP24A1Q07973 514 aa15.17■□□□□ 0.02
CDH1-209ENST00000566510 CYP4F22Q6NT55 531 aa15.17■□□□□ 0.02
CDH1-209ENST00000566510 ANO5Q75V66 913 aa15.17■□□□□ 0.02
CDH1-209ENST00000566510 TMEM174Q8WUU8 243 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms