RNA–Protein interactions for RNA: ENST00000566452.1

BBS2-215, Transcript of Bardet-Biedl syndrome 2, human

TSL 2

Gene BBS2, Length 299 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS2-215	ENST00000566452	PLXNC1	O60486	1568 aa		4.37	□□□□□ -1.71
BBS2-215	ENST00000566452	INO80	Q9ULG1	1556 aa	Predicted RBP	4.37	□□□□□ -1.71
BBS2-215	ENST00000566452	LRP6	O75581	1613 aa		4.37	□□□□□ -1.71
BBS2-215	ENST00000566452	COL16A1	Q07092	1604 aa	Predicted RBP	4.37	□□□□□ -1.71
BBS2-215	ENST00000566452		A0A0A6YYJ9	748 aa		4.37	□□□□□ -1.71
BBS2-215	ENST00000566452		H3BUI4	141 aa		4.37	□□□□□ -1.71
BBS2-215	ENST00000566452		J3KRW8	73 aa		4.37	□□□□□ -1.71
BBS2-215	ENST00000566452	EXOC5	O00471	708 aa		4.37	□□□□□ -1.71
BBS2-215	ENST00000566452	APOL1	O14791	398 aa		4.37	□□□□□ -1.71
BBS2-215	ENST00000566452	SGSM2	O43147	1006 aa		4.37	□□□□□ -1.71
BBS2-215	ENST00000566452	RNASEH2A	O75792	299 aa	Known RBP	4.37	□□□□□ -1.71
BBS2-215	ENST00000566452	CNOT4	O95628	575 aa	Known RBP	4.37	□□□□□ -1.71
BBS2-215	ENST00000566452	TH	P07101	528 aa		4.37	□□□□□ -1.71
BBS2-215	ENST00000566452	RNASE1	P07998	156 aa	Known RBP	4.37	□□□□□ -1.71
BBS2-215	ENST00000566452	PARP1	P09874	1014 aa	Known RBP	4.37	□□□□□ -1.71
BBS2-215	ENST00000566452	ZGLP1	P0C6A0	271 aa		4.37	□□□□□ -1.71
BBS2-215	ENST00000566452	MSL3P1	P0C860	447 aa		4.37	□□□□□ -1.71
BBS2-215	ENST00000566452	BRAF	P15056	766 aa		4.37	□□□□□ -1.71
BBS2-215	ENST00000566452	GSPT1	P15170	499 aa	Known RBP	4.37	□□□□□ -1.71
BBS2-215	ENST00000566452	PRKCA	P17252	672 aa		4.37	□□□□□ -1.71
BBS2-215	ENST00000566452	SLC7A1	P30825	629 aa		4.37	□□□□□ -1.71
BBS2-215	ENST00000566452	MC4R	P32245	332 aa		4.37	□□□□□ -1.71
BBS2-215	ENST00000566452	CDC42EP1	Q00587	391 aa		4.37	□□□□□ -1.71
BBS2-215	ENST00000566452	CNGB1	Q14028	1251 aa	Predicted RBP	4.37	□□□□□ -1.71
BBS2-215	ENST00000566452	NOLC1	Q14978	699 aa	Known RBP eCLIP	4.37	□□□□□ -1.71
BBS2-215	ENST00000566452	RFX8	Q6ZV50	586 aa		4.37	□□□□□ -1.71
BBS2-215	ENST00000566452	PDZD4	Q76G19	769 aa	Predicted RBP	4.37	□□□□□ -1.71
BBS2-215	ENST00000566452	RSRC2	Q7L4I2	434 aa	Known RBP	4.37	□□□□□ -1.71
BBS2-215	ENST00000566452	WFDC3	Q8IUB2	231 aa		4.37	□□□□□ -1.71
BBS2-215	ENST00000566452	PDILT	Q8N807	584 aa		4.37	□□□□□ -1.71
BBS2-215	ENST00000566452	ARRDC4	Q8NCT1	418 aa		4.37	□□□□□ -1.71
BBS2-215	ENST00000566452	DPF2	Q92785	391 aa		4.37	□□□□□ -1.71
BBS2-215	ENST00000566452	SUCLG2	Q96I99	432 aa		4.37	□□□□□ -1.71
BBS2-215	ENST00000566452	MSLNL	Q96KJ4	702 aa		4.37	□□□□□ -1.71
BBS2-215	ENST00000566452	SAMD11	Q96NU1	681 aa		4.37	□□□□□ -1.71
BBS2-215	ENST00000566452	NT5C1B	Q96P26	610 aa		4.37	□□□□□ -1.71
BBS2-215	ENST00000566452	NOL10	Q9BSC4	688 aa	Known RBP	4.37	□□□□□ -1.71
BBS2-215	ENST00000566452	TMEM120A	Q9BXJ8	343 aa		4.37	□□□□□ -1.71
BBS2-215	ENST00000566452	ARMT1	Q9H993	441 aa		4.37	□□□□□ -1.71
BBS2-215	ENST00000566452	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	4.37	□□□□□ -1.71
BBS2-215	ENST00000566452	INCENP	Q9NQS7	918 aa		4.37	□□□□□ -1.71
BBS2-215	ENST00000566452	CNNM1	Q9NRU3	951 aa		4.37	□□□□□ -1.71
BBS2-215	ENST00000566452	RASSF1	Q9NS23	344 aa		4.37	□□□□□ -1.71
BBS2-215	ENST00000566452	TDP1	Q9NUW8	608 aa		4.37	□□□□□ -1.71
BBS2-215	ENST00000566452	UCKL1	Q9NWZ5	548 aa		4.37	□□□□□ -1.71
BBS2-215	ENST00000566452	KCMF1	Q9P0J7	381 aa		4.37	□□□□□ -1.71
BBS2-215	ENST00000566452	FTSJ1	Q9UET6	329 aa		4.37	□□□□□ -1.71
BBS2-215	ENST00000566452	STAP2	Q9UGK3	403 aa		4.37	□□□□□ -1.71
BBS2-215	ENST00000566452	FEZ2	Q9UHY8	353 aa	Predicted RBP	4.37	□□□□□ -1.71
BBS2-215	ENST00000566452	PCDHB1	Q9Y5F3	818 aa		4.37	□□□□□ -1.71
BBS2-215	ENST00000566452	TRO	Q12816	1431 aa	Predicted RBP	4.37	□□□□□ -1.71
BBS2-215	ENST00000566452	SRCAP	Q6ZRS2	3230 aa		4.36	□□□□□ -1.71
BBS2-215	ENST00000566452		A0A1W2PPC4	97 aa		4.36	□□□□□ -1.71
BBS2-215	ENST00000566452	MYO1F	O00160	1098 aa		4.36	□□□□□ -1.71
BBS2-215	ENST00000566452	NFIB	O00712	420 aa		4.36	□□□□□ -1.71
BBS2-215	ENST00000566452	SRGAP3	O43295	1099 aa		4.36	□□□□□ -1.71
BBS2-215	ENST00000566452	MAF	O75444	373 aa	Predicted RBP	4.36	□□□□□ -1.71
BBS2-215	ENST00000566452	SEC24D	O94855	1032 aa	Predicted RBP	4.36	□□□□□ -1.71
BBS2-215	ENST00000566452	ENDOD1	O94919	500 aa		4.36	□□□□□ -1.71
BBS2-215	ENST00000566452	RHOBTB3	O94955	611 aa		4.36	□□□□□ -1.71
BBS2-215	ENST00000566452	ZBTB7A	O95365	584 aa		4.36	□□□□□ -1.71
BBS2-215	ENST00000566452	MPIG6B	O95866	241 aa		4.36	□□□□□ -1.71
BBS2-215	ENST00000566452	FUT4	P22083	530 aa		4.36	□□□□□ -1.71
BBS2-215	ENST00000566452	APEX1	P27695	318 aa	Known RBP	4.36	□□□□□ -1.71
BBS2-215	ENST00000566452	HSPA7	P48741	367 aa		4.36	□□□□□ -1.71
BBS2-215	ENST00000566452	NKX6-1	P78426	367 aa	Predicted RBP	4.36	□□□□□ -1.71
BBS2-215	ENST00000566452	MEF2A	Q02078	507 aa	Predicted RBP	4.36	□□□□□ -1.71
BBS2-215	ENST00000566452	PRKCQ	Q04759	706 aa		4.36	□□□□□ -1.71
BBS2-215	ENST00000566452	PPP3CA	Q08209	521 aa		4.36	□□□□□ -1.71
BBS2-215	ENST00000566452	NFATC3	Q12968	1075 aa		4.36	□□□□□ -1.71
BBS2-215	ENST00000566452	IKZF1	Q13422	519 aa		4.36	□□□□□ -1.71
BBS2-215	ENST00000566452	PRKG1	Q13976	671 aa		4.36	□□□□□ -1.71
BBS2-215	ENST00000566452	KCTD2	Q14681	263 aa		4.36	□□□□□ -1.71
BBS2-215	ENST00000566452	NOMO1	Q15155	1222 aa		4.36	□□□□□ -1.71
BBS2-215	ENST00000566452	CNGA2	Q16280	664 aa		4.36	□□□□□ -1.71
BBS2-215	ENST00000566452	MPEG1	Q2M385	716 aa		4.36	□□□□□ -1.71
BBS2-215	ENST00000566452	INTS11	Q5TA45	600 aa	Known RBP	4.36	□□□□□ -1.71
BBS2-215	ENST00000566452	CD276	Q5ZPR3	534 aa		4.36	□□□□□ -1.71
BBS2-215	ENST00000566452	CYP26C1	Q6V0L0	522 aa		4.36	□□□□□ -1.71
BBS2-215	ENST00000566452	GAREM2	Q75VX8	874 aa		4.36	□□□□□ -1.71
BBS2-215	ENST00000566452	HEATR3	Q7Z4Q2	680 aa		4.36	□□□□□ -1.71
BBS2-215	ENST00000566452	BMP8A	Q7Z5Y6	402 aa		4.36	□□□□□ -1.71
BBS2-215	ENST00000566452	SPPL2C	Q8IUH8	684 aa		4.36	□□□□□ -1.71
BBS2-215	ENST00000566452	RHOT1	Q8IXI2	618 aa		4.36	□□□□□ -1.71
BBS2-215	ENST00000566452	CACNA2D3	Q8IZS8	1091 aa		4.36	□□□□□ -1.71
BBS2-215	ENST00000566452	RNF152	Q8N8N0	203 aa		4.36	□□□□□ -1.71
BBS2-215	ENST00000566452	FANCB	Q8NB91	859 aa		4.36	□□□□□ -1.71
BBS2-215	ENST00000566452	TBC1D20	Q96BZ9	403 aa		4.36	□□□□□ -1.71
BBS2-215	ENST00000566452	MISP3	Q96FF7	219 aa		4.36	□□□□□ -1.71
BBS2-215	ENST00000566452	RMDN3	Q96TC7	470 aa		4.36	□□□□□ -1.71
BBS2-215	ENST00000566452	STK33	Q9BYT3	514 aa		4.36	□□□□□ -1.71
BBS2-215	ENST00000566452	UNC45A	Q9H3U1	944 aa		4.36	□□□□□ -1.71
BBS2-215	ENST00000566452	C14orf93	Q9H972	538 aa	Known RBP	4.36	□□□□□ -1.71
BBS2-215	ENST00000566452	MBNL3	Q9NUK0	354 aa	Known RBP	4.36	□□□□□ -1.71
BBS2-215	ENST00000566452	DTL	Q9NZJ0	730 aa		4.36	□□□□□ -1.71
BBS2-215	ENST00000566452	EBF1	Q9UH73	591 aa		4.36	□□□□□ -1.71
BBS2-215	ENST00000566452	NRBP1	Q9UHY1	535 aa		4.36	□□□□□ -1.71
BBS2-215	ENST00000566452	TMEM59L	Q9UK28	342 aa		4.36	□□□□□ -1.71
BBS2-215	ENST00000566452	SIT1	Q9Y3P8	196 aa		4.36	□□□□□ -1.71
BBS2-215	ENST00000566452	PCDHA13	Q9Y5I0	950 aa		4.36	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms