RNA–Protein interactions for RNA: ENST00000566221.5

SPG7-213, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-213ENST00000566221 GDF15Q99988 308 aa16.04■□□□□ 0.16
SPG7-213ENST00000566221 UBE2OQ9C0C9 1292 aaKnown RBP16.04■□□□□ 0.16
SPG7-213ENST00000566221 GRPEL1Q9HAV7 217 aa16.04■□□□□ 0.16
SPG7-213ENST00000566221 RNF19AQ9NV58 838 aa16.04■□□□□ 0.16
SPG7-213ENST00000566221 KLK14Q9P0G3 267 aa16.04■□□□□ 0.16
SPG7-213ENST00000566221 C2CD2Q9Y426 696 aa16.04■□□□□ 0.16
SPG7-213ENST00000566221 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.04■□□□□ 0.16
SPG7-213ENST00000566221 SLC4A7Q9Y6M7 1214 aa16.04■□□□□ 0.16
SPG7-213ENST00000566221 SCN1AP35498 2009 aa16.03■□□□□ 0.16
SPG7-213ENST00000566221 LRRIQ3A6PVS8 624 aaPredicted RBP16.03■□□□□ 0.16
SPG7-213ENST00000566221 XPOTO43592 962 aaKnown RBP16.03■□□□□ 0.16
SPG7-213ENST00000566221 STX10O60499 249 aa16.03■□□□□ 0.16
SPG7-213ENST00000566221 UPP2O95045 317 aa16.03■□□□□ 0.16
SPG7-213ENST00000566221 DLATP10515 647 aaKnown RBP16.03■□□□□ 0.16
SPG7-213ENST00000566221 CDK11BP21127 795 aaKnown RBP16.03■□□□□ 0.16
SPG7-213ENST00000566221 WNT7BP56706 349 aa16.03■□□□□ 0.16
SPG7-213ENST00000566221 GRIK3Q13003 919 aa16.03■□□□□ 0.16
SPG7-213ENST00000566221 TMEM132DQ14C87 1099 aa16.03■□□□□ 0.16
SPG7-213ENST00000566221 RASIP1Q5U651 963 aa16.03■□□□□ 0.16
SPG7-213ENST00000566221 TCERG1LQ5VWI1 586 aa16.03■□□□□ 0.16
SPG7-213ENST00000566221 JADE1Q6IE81 842 aa16.03■□□□□ 0.16
SPG7-213ENST00000566221 CREBRFQ8IUR6 639 aa16.03■□□□□ 0.16
SPG7-213ENST00000566221 PHOSPHO2Q8TCD6 241 aa16.03■□□□□ 0.16
SPG7-213ENST00000566221 PLEKHO2Q8TD55 490 aa16.03■□□□□ 0.16
SPG7-213ENST00000566221 KIF12Q96FN5 646 aa16.03■□□□□ 0.16
SPG7-213ENST00000566221 RNPC3Q96LT9 517 aaKnown RBP16.03■□□□□ 0.16
SPG7-213ENST00000566221 MRPL9Q9BYD2 267 aaKnown RBP16.03■□□□□ 0.16
SPG7-213ENST00000566221 TMEM117Q9H0C3 514 aa16.03■□□□□ 0.16
SPG7-213ENST00000566221 RBSNQ9H1K0 784 aa16.03■□□□□ 0.16
SPG7-213ENST00000566221 CXXC1Q9P0U4 656 aaPredicted RBP16.03■□□□□ 0.16
SPG7-213ENST00000566221 INPP5FQ9Y2H2 1132 aa16.03■□□□□ 0.16
SPG7-213ENST00000566221 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.03■□□□□ 0.16
SPG7-213ENST00000566221 TULP1O00294 542 aaPredicted RBP16.02■□□□□ 0.16
SPG7-213ENST00000566221 PTGESO14684 152 aa16.02■□□□□ 0.16
SPG7-213ENST00000566221 OFD1O75665 1012 aa16.02■□□□□ 0.16
SPG7-213ENST00000566221 DGKIO75912 1065 aa16.02■□□□□ 0.16
SPG7-213ENST00000566221 TPM2P07951 284 aa16.02■□□□□ 0.16
SPG7-213ENST00000566221 NFICP08651 508 aa16.02■□□□□ 0.16
SPG7-213ENST00000566221 TRIM49P0CI25 452 aa16.02■□□□□ 0.16
SPG7-213ENST00000566221 TRIM49CP0CI26 452 aa16.02■□□□□ 0.16
SPG7-213ENST00000566221 TNNI1P19237 187 aa16.02■□□□□ 0.16
SPG7-213ENST00000566221 SCNN1GP51170 649 aa16.02■□□□□ 0.16
SPG7-213ENST00000566221 AP3M2P53677 418 aa16.02■□□□□ 0.16
SPG7-213ENST00000566221 CLDN10P78369 228 aa16.02■□□□□ 0.16
SPG7-213ENST00000566221 MAN2A1Q16706 1144 aa16.02■□□□□ 0.16
SPG7-213ENST00000566221 NOMO2Q5JPE7 1267 aa16.02■□□□□ 0.16
SPG7-213ENST00000566221 Q7L0L9 218 aa16.02■□□□□ 0.16
SPG7-213ENST00000566221 EFCAB13Q8IY85 973 aa16.02■□□□□ 0.16
SPG7-213ENST00000566221 CACTINQ8WUQ7 758 aaKnown RBP16.02■□□□□ 0.16
SPG7-213ENST00000566221 SLC35C1Q96A29 364 aa16.02■□□□□ 0.16
SPG7-213ENST00000566221 ANKRD36BP1Q96IX9 119 aa16.02■□□□□ 0.16
SPG7-213ENST00000566221 TUBGCP2Q9BSJ2 902 aa16.02■□□□□ 0.16
SPG7-213ENST00000566221 SLC38A7Q9NVC3 462 aa16.02■□□□□ 0.16
SPG7-213ENST00000566221 KANSL3Q9P2N6 904 aa16.02■□□□□ 0.16
SPG7-213ENST00000566221 LIMA1Q9UHB6 759 aaKnown RBP16.02■□□□□ 0.16
SPG7-213ENST00000566221 UBQLN1Q9UMX0 589 aaKnown RBP16.02■□□□□ 0.16
SPG7-213ENST00000566221 STXBP5LQ9Y2K9 1186 aa16.02■□□□□ 0.16
SPG7-213ENST00000566221 PTPRJQ12913 1337 aa16.01■□□□□ 0.15
SPG7-213ENST00000566221 SMIM28A0A1B0GU29 152 aa16.01■□□□□ 0.15
SPG7-213ENST00000566221 TNNC2P02585 160 aa16.01■□□□□ 0.15
SPG7-213ENST00000566221 THP07101 528 aa16.01■□□□□ 0.15
SPG7-213ENST00000566221 TMEM191BP0C7N4 346 aa16.01■□□□□ 0.15
SPG7-213ENST00000566221 ATP1A3P13637 1013 aa16.01■□□□□ 0.15
SPG7-213ENST00000566221 PRKCSHP14314 528 aaPredicted RBP16.01■□□□□ 0.15
SPG7-213ENST00000566221 ATP2A2P16615 1042 aaKnown RBP16.01■□□□□ 0.15
SPG7-213ENST00000566221 GTF2H1P32780 548 aa16.01■□□□□ 0.15
SPG7-213ENST00000566221 DLG4P78352 724 aa16.01■□□□□ 0.15
SPG7-213ENST00000566221 KRT31Q15323 416 aa16.01■□□□□ 0.15
SPG7-213ENST00000566221 GLRA4Q5JXX5 417 aa16.01■□□□□ 0.15
SPG7-213ENST00000566221 C9orf50Q5SZB4 431 aa16.01■□□□□ 0.15
SPG7-213ENST00000566221 LRRC43Q8N309 656 aa16.01■□□□□ 0.15
SPG7-213ENST00000566221 GSTCDQ8NEC7 633 aa16.01■□□□□ 0.15
SPG7-213ENST00000566221 ZMAT2Q96NC0 199 aaKnown RBP16.01■□□□□ 0.15
SPG7-213ENST00000566221 CASD1Q96PB1 797 aa16.01■□□□□ 0.15
SPG7-213ENST00000566221 PPP1R10Q96QC0 940 aaKnown RBP16.01■□□□□ 0.15
SPG7-213ENST00000566221 CXCL16Q9H2A7 254 aa16.01■□□□□ 0.15
SPG7-213ENST00000566221 RC3H2Q9HBD1 1191 aaKnown RBP16.01■□□□□ 0.15
SPG7-213ENST00000566221 INTS13Q9NVM9 706 aa16.01■□□□□ 0.15
SPG7-213ENST00000566221 TBKBP1A7MCY6 615 aa16■□□□□ 0.15
SPG7-213ENST00000566221 N4BP1O75113 896 aaKnown RBP16■□□□□ 0.15
SPG7-213ENST00000566221 GJB5O95377 273 aa16■□□□□ 0.15
SPG7-213ENST00000566221 POMCP01189 267 aa16■□□□□ 0.15
SPG7-213ENST00000566221 AFPP02771 609 aaKnown RBP16■□□□□ 0.15
SPG7-213ENST00000566221 BMP8BP34820 402 aa16■□□□□ 0.15
SPG7-213ENST00000566221 GATMP50440 423 aa16■□□□□ 0.15
SPG7-213ENST00000566221 TFAMQ00059 246 aaKnown RBP16■□□□□ 0.15
SPG7-213ENST00000566221 RNASELQ05823 741 aaKnown RBP16■□□□□ 0.15
SPG7-213ENST00000566221 SHHQ15465 462 aa16■□□□□ 0.15
SPG7-213ENST00000566221 DUOXA2Q1HG44 320 aa16■□□□□ 0.15
SPG7-213ENST00000566221 C1orf220Q5T0J3 134 aa16■□□□□ 0.15
SPG7-213ENST00000566221 LMBRD2Q68DH5 695 aaPredicted RBP16■□□□□ 0.15
SPG7-213ENST00000566221 FAM117BQ6P1L5 589 aa16■□□□□ 0.15
SPG7-213ENST00000566221 TMCO2Q7Z6W1 182 aaPredicted RBP16■□□□□ 0.15
SPG7-213ENST00000566221 HERC6Q8IVU3 1022 aa16■□□□□ 0.15
SPG7-213ENST00000566221 CMTR2Q8IYT2 770 aaKnown RBP16■□□□□ 0.15
SPG7-213ENST00000566221 BEST2Q8NFU1 509 aa16■□□□□ 0.15
SPG7-213ENST00000566221 ZNF689Q96CS4 500 aaPredicted RBP16■□□□□ 0.15
SPG7-213ENST00000566221 YME1L1Q96TA2 773 aa16■□□□□ 0.15
SPG7-213ENST00000566221 POP1Q99575 1024 aaKnown RBP16■□□□□ 0.15
SPG7-213ENST00000566221 MTMR12Q9C0I1 747 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms