RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 MAGEB18Q96M61 343 aa3.09□□□□□ -1.92
CHD9-218ENST00000566029 CEP72Q9P209 647 aa3.09□□□□□ -1.92
CHD9-218ENST00000566029 DNAJB4Q9UDY4 337 aa3.09□□□□□ -1.92
CHD9-218ENST00000566029 C15orf38-AP3S2A0A0A6YYH1 394 aa3.09□□□□□ -1.92
CHD9-218ENST00000566029 PIGBOS1A0A0B4J2F0 54 aa3.09□□□□□ -1.92
CHD9-218ENST00000566029 TSPAN9O75954 239 aa3.09□□□□□ -1.92
CHD9-218ENST00000566029 TNFAIP1Q13829 316 aa3.09□□□□□ -1.92
CHD9-218ENST00000566029 PDIA6Q15084 440 aa3.09□□□□□ -1.92
CHD9-218ENST00000566029 RCN1Q15293 331 aa3.09□□□□□ -1.92
CHD9-218ENST00000566029 PPP2R5EQ16537 467 aa3.09□□□□□ -1.92
CHD9-218ENST00000566029 USP41Q3LFD5 358 aa3.09□□□□□ -1.92
CHD9-218ENST00000566029 CENPPQ6IPU0 288 aa3.09□□□□□ -1.92
CHD9-218ENST00000566029 ARPINQ7Z6K5 226 aa3.09□□□□□ -1.92
CHD9-218ENST00000566029 SEPT1Q8WYJ6 367 aa3.09□□□□□ -1.92
CHD9-218ENST00000566029 TMEM87BQ96K49 555 aa3.09□□□□□ -1.92
CHD9-218ENST00000566029 TTC1Q99614 292 aa3.09□□□□□ -1.92
CHD9-218ENST00000566029 NCANO14594 1321 aa3.09□□□□□ -1.92
CHD9-218ENST00000566029 UBE4BO95155 1302 aa3.09□□□□□ -1.92
CHD9-218ENST00000566029 PCDH11XQ9BZA7 1347 aa3.09□□□□□ -1.92
CHD9-218ENST00000566029 A0A0A6YYK5 440 aaPredicted RBP3.09□□□□□ -1.92
CHD9-218ENST00000566029 KCNK3O14649 394 aa3.09□□□□□ -1.92
CHD9-218ENST00000566029 MAP3K7O43318 606 aa3.09□□□□□ -1.92
CHD9-218ENST00000566029 NOL4O94818 638 aa3.09□□□□□ -1.92
CHD9-218ENST00000566029 NAT2P11245 290 aa3.09□□□□□ -1.92
CHD9-218ENST00000566029 PLCG2P16885 1265 aa3.09□□□□□ -1.92
CHD9-218ENST00000566029 ATP2C1P98194 919 aaPredicted RBP3.09□□□□□ -1.92
CHD9-218ENST00000566029 RELAQ04206 551 aa3.09□□□□□ -1.92
CHD9-218ENST00000566029 CALCOCO2Q13137 446 aa3.09□□□□□ -1.92
CHD9-218ENST00000566029 KRT72Q14CN4 511 aa3.09□□□□□ -1.92
CHD9-218ENST00000566029 R3HDM1Q15032 1099 aaKnown RBP3.09□□□□□ -1.92
CHD9-218ENST00000566029 ZNF174Q15697 407 aa3.09□□□□□ -1.92
CHD9-218ENST00000566029 MAN2A1Q16706 1144 aa3.09□□□□□ -1.92
CHD9-218ENST00000566029 RASIP1Q5U651 963 aa3.09□□□□□ -1.92
CHD9-218ENST00000566029 ALKBH2Q6NS38 261 aa3.09□□□□□ -1.92
CHD9-218ENST00000566029 TYW1BQ6NUM6 668 aa3.09□□□□□ -1.92
CHD9-218ENST00000566029 NEPROQ6NW34 567 aa3.09□□□□□ -1.92
CHD9-218ENST00000566029 TTC27Q6P3X3 843 aa3.09□□□□□ -1.92
CHD9-218ENST00000566029 TAOK1Q7L7X3 1001 aa3.09□□□□□ -1.92
CHD9-218ENST00000566029 BNIPLQ7Z465 357 aa3.09□□□□□ -1.92
CHD9-218ENST00000566029 RIC3Q7Z5B4 369 aa3.09□□□□□ -1.92
CHD9-218ENST00000566029 BBOF1Q8ND07 529 aa3.09□□□□□ -1.92
CHD9-218ENST00000566029 TRPC4APQ8TEL6 797 aa3.09□□□□□ -1.92
CHD9-218ENST00000566029 APPBP2Q92624 585 aa3.09□□□□□ -1.92
CHD9-218ENST00000566029 ESR2Q92731 530 aa3.09□□□□□ -1.92
CHD9-218ENST00000566029 MAP3K2Q9Y2U5 619 aa3.09□□□□□ -1.92
CHD9-218ENST00000566029 PFASO15067 1338 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 RPTORQ8N122 1335 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 DDX3XO00571 662 aaKnown RBP eCLIP3.08□□□□□ -1.92
CHD9-218ENST00000566029 RGS16O15492 202 aaPredicted RBP3.08□□□□□ -1.92
CHD9-218ENST00000566029 DLGAP3O95886 979 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 PSMA3P25788 255 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 KCNH2Q12809 1159 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 KIAA1755Q5JYT7 1200 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 B3GNT6Q6ZMB0 384 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 HNRNPABQ99729 332 aaKnown RBP3.08□□□□□ -1.92
CHD9-218ENST00000566029 PRMT1Q99873 361 aaKnown RBP3.08□□□□□ -1.92
CHD9-218ENST00000566029 NACAP1Q9BZK3 213 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 CCSER2Q9H7U1 834 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 ZNF180Q9UJW8 692 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 ANGPTL2Q9UKU9 493 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 HEY1Q9Y5J3 304 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 ANKRD63C9JTQ0 380 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 VILLO15195 856 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 SERPINI2O75830 405 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 KLRC1P26715 233 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 MARK3P27448 753 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 RPS3AP61247 264 aaKnown RBP3.08□□□□□ -1.92
CHD9-218ENST00000566029 GSTA5Q7RTV2 222 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 TREML1Q86YW5 311 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 PYROXD1Q8WU10 500 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 PRR11Q96HE9 360 aaPredicted RBP3.08□□□□□ -1.92
CHD9-218ENST00000566029 LBHD1Q9BQE6 289 aaPredicted RBP3.08□□□□□ -1.92
CHD9-218ENST00000566029 TBC1D10AQ9BXI6 508 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 CRNKL1Q9BZJ0 848 aaKnown RBP3.08□□□□□ -1.92
CHD9-218ENST00000566029 SEMA6BQ9H3T3 888 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 MRPL40Q9NQ50 206 aaKnown RBP3.08□□□□□ -1.92
CHD9-218ENST00000566029 ITM2BQ9Y287 266 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 GRM8O00222 908 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 EXOC3O60645 756 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 IFIT1P09914 478 aaKnown RBP3.08□□□□□ -1.92
CHD9-218ENST00000566029 CXCR5P32302 372 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 HSD17B4P51659 736 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 RAB15P59190 212 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 EAPPQ56P03 285 aaPredicted RBP3.08□□□□□ -1.92
CHD9-218ENST00000566029 C16orf87Q6PH81 154 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 FOXR2Q6PJQ5 311 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 CCDC84Q86UT8 332 aaPredicted RBP3.08□□□□□ -1.92
CHD9-218ENST00000566029 AHI1Q8N157 1196 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 TTC39CQ8N584 583 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 RIN3Q8TB24 985 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 FBXO25Q8TCJ0 367 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 C7orf43Q8WVR3 580 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 PHKBQ93100 1093 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 SLC26A6Q9BXS9 759 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 NDEL1Q9GZM8 345 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 PLK2Q9NYY3 685 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 STARD13Q9Y3M8 1113 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 A0A088AWK7 358 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 TTI1O43156 1089 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 SORBS3O60504 671 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms