RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 EARS2Q5JPH6 523 aaKnown RBP14.11□□□□□ -0.15
RNF40-208ENST00000565995 ZNF852Q6ZMS4 543 aa14.11□□□□□ -0.15
RNF40-208ENST00000565995 PIK3AP1Q6ZUJ8 805 aa14.11□□□□□ -0.15
RNF40-208ENST00000565995 CEP57Q86XR8 500 aa14.11□□□□□ -0.15
RNF40-208ENST00000565995 OXER1Q8TDS5 423 aa14.11□□□□□ -0.15
RNF40-208ENST00000565995 DNASE1L2Q92874 299 aa14.11□□□□□ -0.15
RNF40-208ENST00000565995 TNFRSF25Q93038 417 aa14.11□□□□□ -0.15
RNF40-208ENST00000565995 IER2Q9BTL4 223 aa14.11□□□□□ -0.15
RNF40-208ENST00000565995 CXCL16Q9H2A7 254 aa14.11□□□□□ -0.15
RNF40-208ENST00000565995 TRPV5Q9NQA5 729 aa14.11□□□□□ -0.15
RNF40-208ENST00000565995 MRPS17Q9Y2R5 130 aaKnown RBP14.11□□□□□ -0.15
RNF40-208ENST00000565995 BACE2Q9Y5Z0 518 aa14.11□□□□□ -0.15
RNF40-208ENST00000565995 CYP46A1Q9Y6A2 500 aa14.11□□□□□ -0.15
RNF40-208ENST00000565995 LAMA1P25391 3075 aa14.11□□□□□ -0.15
RNF40-208ENST00000565995 ZFHX4Q86UP3 3567 aa14.1□□□□□ -0.15
RNF40-208ENST00000565995 ARHGEF37A1IGU5 675 aa14.1□□□□□ -0.15
RNF40-208ENST00000565995 CASTOR2A6NHX0 329 aa14.1□□□□□ -0.15
RNF40-208ENST00000565995 N4BP3O15049 544 aa14.1□□□□□ -0.15
RNF40-208ENST00000565995 MARCH6O60337 910 aa14.1□□□□□ -0.15
RNF40-208ENST00000565995 ABLIM3O94929 683 aa14.1□□□□□ -0.15
RNF40-208ENST00000565995 REC8O95072 547 aa14.1□□□□□ -0.15
RNF40-208ENST00000565995 XBP1P17861 261 aa14.1□□□□□ -0.15
RNF40-208ENST00000565995 CD300LGQ6UXG3 332 aa14.1□□□□□ -0.15
RNF40-208ENST00000565995 TPRG1Q6ZUI0 275 aa14.1□□□□□ -0.15
RNF40-208ENST00000565995 HASPINQ8TF76 798 aa14.1□□□□□ -0.15
RNF40-208ENST00000565995 POLR3FQ9H1D9 316 aaPredicted RBP14.1□□□□□ -0.15
RNF40-208ENST00000565995 PDZD7Q9H5P4 517 aa14.1□□□□□ -0.15
RNF40-208ENST00000565995 SNTG2Q9NY99 539 aa14.1□□□□□ -0.15
RNF40-208ENST00000565995 TTLL13PA6NNM8 815 aa14.09□□□□□ -0.15
RNF40-208ENST00000565995 LRP3O75074 770 aa14.09□□□□□ -0.15
RNF40-208ENST00000565995 CDKL5O76039 1030 aa14.09□□□□□ -0.15
RNF40-208ENST00000565995 RECQL4O94761 1208 aa14.09□□□□□ -0.15
RNF40-208ENST00000565995 PTPN2P17706 415 aa14.09□□□□□ -0.15
RNF40-208ENST00000565995 FCARP24071 287 aa14.09□□□□□ -0.15
RNF40-208ENST00000565995 NRLP54845 237 aa14.09□□□□□ -0.15
RNF40-208ENST00000565995 MTAPQ13126 283 aa14.09□□□□□ -0.15
RNF40-208ENST00000565995 SLC5A9Q2M3M2 681 aa14.09□□□□□ -0.15
RNF40-208ENST00000565995 PRSS36Q5K4E3 855 aa14.09□□□□□ -0.15
RNF40-208ENST00000565995 TANGO2Q6ICL3 276 aa14.09□□□□□ -0.15
RNF40-208ENST00000565995 CELF5Q8N6W0 485 aaKnown RBP14.09□□□□□ -0.15
RNF40-208ENST00000565995 MCPH1Q8NEM0 835 aa14.09□□□□□ -0.15
RNF40-208ENST00000565995 ZNF461Q8TAF7 563 aa14.09□□□□□ -0.15
RNF40-208ENST00000565995 PPP1R10Q96QC0 940 aaKnown RBP14.09□□□□□ -0.15
RNF40-208ENST00000565995 MTMR9Q96QG7 549 aa14.09□□□□□ -0.15
RNF40-208ENST00000565995 CCDC113Q9H0I3 377 aa14.09□□□□□ -0.15
RNF40-208ENST00000565995 CHRDQ9H2X0 955 aa14.09□□□□□ -0.15
RNF40-208ENST00000565995 TTC12Q9H892 705 aaPredicted RBP14.09□□□□□ -0.15
RNF40-208ENST00000565995 CDV3Q9UKY7 258 aaKnown RBP14.09□□□□□ -0.15
RNF40-208ENST00000565995 POLIQ9UNA4 740 aa14.09□□□□□ -0.15
RNF40-208ENST00000565995 MRPS23Q9Y3D9 190 aaKnown RBP14.09□□□□□ -0.15
RNF40-208ENST00000565995 ACKR2O00590 384 aa14.08□□□□□ -0.16
RNF40-208ENST00000565995 MAN2B1O00754 1011 aa14.08□□□□□ -0.16
RNF40-208ENST00000565995 RHOP08100 348 aa14.08□□□□□ -0.16
RNF40-208ENST00000565995 SPATA31C1P0DKV0 1188 aa14.08□□□□□ -0.16
RNF40-208ENST00000565995 MLLT6P55198 1093 aaPredicted RBP14.08□□□□□ -0.16
RNF40-208ENST00000565995 SCRN1Q12765 414 aa14.08□□□□□ -0.16
RNF40-208ENST00000565995 UPP1Q16831 310 aa14.08□□□□□ -0.16
RNF40-208ENST00000565995 SLC8B1Q6J4K2 584 aa14.08□□□□□ -0.16
RNF40-208ENST00000565995 TSSK4Q6SA08 328 aa14.08□□□□□ -0.16
RNF40-208ENST00000565995 ANKS3Q6ZW76 656 aa14.08□□□□□ -0.16
RNF40-208ENST00000565995 PIGOQ8TEQ8 1089 aa14.08□□□□□ -0.16
RNF40-208ENST00000565995 MCRS1Q96EZ8 462 aa14.08□□□□□ -0.16
RNF40-208ENST00000565995 UROC1Q96N76 676 aa14.08□□□□□ -0.16
RNF40-208ENST00000565995 C2orf40Q9H1Z8 148 aa14.08□□□□□ -0.16
RNF40-208ENST00000565995 PARD6AQ9NPB6 346 aa14.08□□□□□ -0.16
RNF40-208ENST00000565995 HEBP1Q9NRV9 189 aa14.08□□□□□ -0.16
RNF40-208ENST00000565995 GJB4Q9NTQ9 266 aa14.08□□□□□ -0.16
RNF40-208ENST00000565995 CDY1Q9Y6F8 540 aa14.08□□□□□ -0.16
RNF40-208ENST00000565995 ATG2BQ96BY7 2078 aa14.08□□□□□ -0.16
RNF40-208ENST00000565995 FAM205CA6NFA0 338 aa14.07□□□□□ -0.16
RNF40-208ENST00000565995 LRRIQ4A6NIV6 560 aa14.07□□□□□ -0.16
RNF40-208ENST00000565995 TRAPPC3O43617 180 aa14.07□□□□□ -0.16
RNF40-208ENST00000565995 ADRB1P08588 477 aa14.07□□□□□ -0.16
RNF40-208ENST00000565995 IGFBP6P24592 240 aaPredicted RBP14.07□□□□□ -0.16
RNF40-208ENST00000565995 STK3Q13188 491 aa14.07□□□□□ -0.16
RNF40-208ENST00000565995 PRPF4BQ13523 1007 aaKnown RBP14.07□□□□□ -0.16
RNF40-208ENST00000565995 XKR4Q5GH76 650 aa14.07□□□□□ -0.16
RNF40-208ENST00000565995 LAIR1Q6GTX8 287 aa14.07□□□□□ -0.16
RNF40-208ENST00000565995 MAP4K3Q8IVH8 894 aa14.07□□□□□ -0.16
RNF40-208ENST00000565995 ZBTB8OSQ8IWT0 167 aa14.07□□□□□ -0.16
RNF40-208ENST00000565995 TCEAL8Q8IYN2 117 aa14.07□□□□□ -0.16
RNF40-208ENST00000565995 ING5Q8WYH8 240 aa14.07□□□□□ -0.16
RNF40-208ENST00000565995 DDX27Q96GQ7 796 aaKnown RBP14.07□□□□□ -0.16
RNF40-208ENST00000565995 ADPGKQ9BRR6 497 aa14.07□□□□□ -0.16
RNF40-208ENST00000565995 LARP6Q9BRS8 491 aaKnown RBP14.07□□□□□ -0.16
RNF40-208ENST00000565995 GPRC5CQ9NQ84 441 aa14.07□□□□□ -0.16
RNF40-208ENST00000565995 OBSL1O75147 1896 aa14.06□□□□□ -0.16
RNF40-208ENST00000565995 MYO16Q9Y6X6 1858 aa14.06□□□□□ -0.16
RNF40-208ENST00000565995 PFKFB2O60825 505 aa14.06□□□□□ -0.16
RNF40-208ENST00000565995 EDN1P05305 212 aa14.06□□□□□ -0.16
RNF40-208ENST00000565995 ATF2P15336 505 aa14.06□□□□□ -0.16
RNF40-208ENST00000565995 CLCNKBP51801 687 aa14.06□□□□□ -0.16
RNF40-208ENST00000565995 NR5A1Q13285 461 aa14.06□□□□□ -0.16
RNF40-208ENST00000565995 MRPL58Q14197 206 aaKnown RBP14.06□□□□□ -0.16
RNF40-208ENST00000565995 PPP2R5DQ14738 602 aa14.06□□□□□ -0.16
RNF40-208ENST00000565995 CALCRLQ16602 461 aa14.06□□□□□ -0.16
RNF40-208ENST00000565995 MAPK6Q16659 721 aa14.06□□□□□ -0.16
RNF40-208ENST00000565995 ALKAL1Q6UXT8 129 aa14.06□□□□□ -0.16
RNF40-208ENST00000565995 NOSTRINQ8IVI9 506 aa14.06□□□□□ -0.16
RNF40-208ENST00000565995 IRF7Q92985 503 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms