RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 CLIP3Q96DZ5 547 aa5.19□□□□□ -1.58
LINC00561-201ENST00000565815 PTPN18Q99952 460 aa5.19□□□□□ -1.58
LINC00561-201ENST00000565815 POLR3BQ9NW08 1133 aaPredicted RBP5.19□□□□□ -1.58
LINC00561-201ENST00000565815 MAP3K19Q56UN5 1328 aa5.19□□□□□ -1.58
LINC00561-201ENST00000565815 ARFGEF1Q9Y6D6 1849 aa5.18□□□□□ -1.58
LINC00561-201ENST00000565815 SEC24DO94855 1032 aaPredicted RBP5.18□□□□□ -1.58
LINC00561-201ENST00000565815 FPR1P21462 350 aa5.18□□□□□ -1.58
LINC00561-201ENST00000565815 ADCY1Q08828 1119 aa5.18□□□□□ -1.58
LINC00561-201ENST00000565815 NOMO1Q15155 1222 aa5.18□□□□□ -1.58
LINC00561-201ENST00000565815 RRP12Q5JTH9 1297 aaKnown RBP5.18□□□□□ -1.58
LINC00561-201ENST00000565815 SKAP1Q86WV1 359 aa5.18□□□□□ -1.58
LINC00561-201ENST00000565815 STON2Q8WXE9 905 aa5.18□□□□□ -1.58
LINC00561-201ENST00000565815 KCMF1Q9P0J7 381 aa5.18□□□□□ -1.58
LINC00561-201ENST00000565815 PCDHB1Q9Y5F3 818 aa5.18□□□□□ -1.58
LINC00561-201ENST00000565815 RBM8AQ9Y5S9 174 aaKnown RBP5.18□□□□□ -1.58
LINC00561-201ENST00000565815 KIF24Q5T7B8 1368 aa5.18□□□□□ -1.58
LINC00561-201ENST00000565815 A0A0G2JNJ9 132 aa5.18□□□□□ -1.58
LINC00561-201ENST00000565815 NPIPB6E9PJ23 425 aa5.18□□□□□ -1.58
LINC00561-201ENST00000565815 VEGFAP15692 232 aaPredicted RBP5.18□□□□□ -1.58
LINC00561-201ENST00000565815 MRPS9P82933 396 aaKnown RBP5.18□□□□□ -1.58
LINC00561-201ENST00000565815 TMEM200BQ69YZ2 307 aa5.18□□□□□ -1.58
LINC00561-201ENST00000565815 SWSAP1Q6NVH7 229 aa5.18□□□□□ -1.58
LINC00561-201ENST00000565815 LILRA3Q8N6C8 439 aaPredicted RBP5.18□□□□□ -1.58
LINC00561-201ENST00000565815 APOL5Q9BWW9 433 aa5.18□□□□□ -1.58
LINC00561-201ENST00000565815 Q9UFV3 132 aa5.18□□□□□ -1.58
LINC00561-201ENST00000565815 CNOT6Q9ULM6 557 aaKnown RBP5.18□□□□□ -1.58
LINC00561-201ENST00000565815 NUDCQ9Y266 331 aa5.18□□□□□ -1.58
LINC00561-201ENST00000565815 ZDHHC9Q9Y397 364 aa5.18□□□□□ -1.58
LINC00561-201ENST00000565815 MON2Q7Z3U7 1717 aa5.18□□□□□ -1.58
LINC00561-201ENST00000565815 PKD1L3Q7Z443 1732 aa5.18□□□□□ -1.58
LINC00561-201ENST00000565815 DOT1LQ8TEK3 1739 aa5.18□□□□□ -1.58
LINC00561-201ENST00000565815 PRAMEF4O60810 478 aa5.17□□□□□ -1.58
LINC00561-201ENST00000565815 SEMA7AO75326 666 aa5.17□□□□□ -1.58
LINC00561-201ENST00000565815 GSPT1P15170 499 aaKnown RBP5.17□□□□□ -1.58
LINC00561-201ENST00000565815 LINC00310P59036 64 aa5.17□□□□□ -1.58
LINC00561-201ENST00000565815 TOP3AQ13472 1001 aaPredicted RBP5.17□□□□□ -1.58
LINC00561-201ENST00000565815 TMEM240Q5SV17 173 aa5.17□□□□□ -1.58
LINC00561-201ENST00000565815 CCDC146Q8IYE0 955 aa5.17□□□□□ -1.58
LINC00561-201ENST00000565815 ZGPATQ8N5A5 531 aaKnown RBP5.17□□□□□ -1.58
LINC00561-201ENST00000565815 TP53I13Q8NBR0 393 aaPredicted RBP5.17□□□□□ -1.58
LINC00561-201ENST00000565815 RPGRQ92834 1020 aaKnown RBP5.17□□□□□ -1.58
LINC00561-201ENST00000565815 CD320Q9NPF0 282 aa5.17□□□□□ -1.58
LINC00561-201ENST00000565815 ANKRD6Q9Y2G4 727 aa5.17□□□□□ -1.58
LINC00561-201ENST00000565815 KCTD3Q9Y597 815 aa5.17□□□□□ -1.58
LINC00561-201ENST00000565815 KIF7Q2M1P5 1343 aa5.17□□□□□ -1.58
LINC00561-201ENST00000565815 ZNF831Q5JPB2 1677 aa5.17□□□□□ -1.58
LINC00561-201ENST00000565815 TAF1LQ8IZX4 1826 aa5.17□□□□□ -1.58
LINC00561-201ENST00000565815 C2orf78A6NCI8 922 aa5.17□□□□□ -1.58
LINC00561-201ENST00000565815 PEX14O75381 377 aa5.17□□□□□ -1.58
LINC00561-201ENST00000565815 RFPL1O75677 317 aa5.17□□□□□ -1.58
LINC00561-201ENST00000565815 SYN1P17600 705 aa5.17□□□□□ -1.58
LINC00561-201ENST00000565815 MRE11P49959 708 aa5.17□□□□□ -1.58
LINC00561-201ENST00000565815 PCOLCEQ15113 449 aa5.17□□□□□ -1.58
LINC00561-201ENST00000565815 EDC4Q6P2E9 1401 aaKnown RBP5.17□□□□□ -1.58
LINC00561-201ENST00000565815 SAPCD2Q86UD0 394 aa5.17□□□□□ -1.58
LINC00561-201ENST00000565815 DIS3LQ8TF46 1054 aaKnown RBP5.17□□□□□ -1.58
LINC00561-201ENST00000565815 PDCD2LQ9BRP1 358 aa5.17□□□□□ -1.58
LINC00561-201ENST00000565815 L2HGDHQ9H9P8 463 aa5.17□□□□□ -1.58
LINC00561-201ENST00000565815 TCF7L1Q9HCS4 588 aa5.17□□□□□ -1.58
LINC00561-201ENST00000565815 PCDH11XQ9BZA7 1347 aa5.17□□□□□ -1.58
LINC00561-201ENST00000565815 PCDH11YQ9BZA8 1340 aa5.17□□□□□ -1.58
LINC00561-201ENST00000565815 C4BP0C0L5 1744 aa5.17□□□□□ -1.58
LINC00561-201ENST00000565815 POU2F2P09086 479 aa5.17□□□□□ -1.58
LINC00561-201ENST00000565815 GAAP10253 952 aa5.17□□□□□ -1.58
LINC00561-201ENST00000565815 PDCP20941 246 aa5.17□□□□□ -1.58
LINC00561-201ENST00000565815 CTSSP25774 331 aa5.17□□□□□ -1.58
LINC00561-201ENST00000565815 DGKDQ16760 1214 aa5.17□□□□□ -1.58
LINC00561-201ENST00000565815 RNF151Q2KHN1 245 aa5.17□□□□□ -1.58
LINC00561-201ENST00000565815 NXNQ6DKJ4 435 aa5.17□□□□□ -1.58
LINC00561-201ENST00000565815 RHOT1Q8IXI2 618 aa5.17□□□□□ -1.58
LINC00561-201ENST00000565815 MIER2Q8N344 545 aa5.17□□□□□ -1.58
LINC00561-201ENST00000565815 SLC35G2Q8TBE7 412 aa5.17□□□□□ -1.58
LINC00561-201ENST00000565815 OBP2AQ9NY56 170 aa5.17□□□□□ -1.58
LINC00561-201ENST00000565815 TERF2IPQ9NYB0 399 aa5.17□□□□□ -1.58
LINC00561-201ENST00000565815 CD163L1Q9NR16 1453 aa5.16□□□□□ -1.58
LINC00561-201ENST00000565815 PALLDQ8WX93 1383 aa5.16□□□□□ -1.58
LINC00561-201ENST00000565815 RALBP1Q15311 655 aa5.16□□□□□ -1.58
LINC00561-201ENST00000565815 HSP90AB2PQ58FF8 381 aa5.16□□□□□ -1.58
LINC00561-201ENST00000565815 BMP8AQ7Z5Y6 402 aa5.16□□□□□ -1.58
LINC00561-201ENST00000565815 CCHCR1Q8TD31 782 aa5.16□□□□□ -1.58
LINC00561-201ENST00000565815 C8orf48Q96LL4 319 aa5.16□□□□□ -1.58
LINC00561-201ENST00000565815 WDR92Q96MX6 357 aa5.16□□□□□ -1.58
LINC00561-201ENST00000565815 LRFN3Q9BTN0 628 aa5.16□□□□□ -1.58
LINC00561-201ENST00000565815 NMRK2Q9NPI5 230 aa5.16□□□□□ -1.58
LINC00561-201ENST00000565815 KCNG1Q9UIX4 513 aa5.16□□□□□ -1.58
LINC00561-201ENST00000565815 GIT1Q9Y2X7 761 aa5.16□□□□□ -1.58
LINC00561-201ENST00000565815 CCDC194A0A1B0GVG4 234 aa5.16□□□□□ -1.58
LINC00561-201ENST00000565815 STC2O76061 302 aa5.16□□□□□ -1.58
LINC00561-201ENST00000565815 GLDCP23378 1020 aa5.16□□□□□ -1.58
LINC00561-201ENST00000565815 RPL13P26373 211 aaKnown RBP5.16□□□□□ -1.58
LINC00561-201ENST00000565815 ANP32AP39687 249 aaKnown RBP5.16□□□□□ -1.58
LINC00561-201ENST00000565815 MCAMP43121 646 aa5.16□□□□□ -1.58
LINC00561-201ENST00000565815 USP14P54578 494 aa5.16□□□□□ -1.58
LINC00561-201ENST00000565815 BCAR1P56945 870 aa5.16□□□□□ -1.58
LINC00561-201ENST00000565815 FAPQ12884 760 aa5.16□□□□□ -1.58
LINC00561-201ENST00000565815 KCNA10Q16322 511 aa5.16□□□□□ -1.58
LINC00561-201ENST00000565815 ARHGAP29Q52LW3 1261 aa5.16□□□□□ -1.58
LINC00561-201ENST00000565815 PLBD2Q8NHP8 589 aa5.16□□□□□ -1.58
LINC00561-201ENST00000565815 RAPGEF4Q8WZA2 1011 aa5.16□□□□□ -1.58
LINC00561-201ENST00000565815 HOXB13Q92826 284 aaPredicted RBP5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms