RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 LIN9Q5TKA1 542 aa20.28■□□□□ 0.84
CLN6-204ENST00000564752 TAS1R3Q7RTX0 852 aa20.28■□□□□ 0.84
CLN6-204ENST00000564752 GRASPQ7Z6J2 395 aaPredicted RBP20.28■□□□□ 0.84
CLN6-204ENST00000564752 CDK5RAP3Q96JB5 506 aa20.28■□□□□ 0.84
CLN6-204ENST00000564752 RUSC1Q9BVN2 902 aa20.28■□□□□ 0.84
CLN6-204ENST00000564752 ARHGAP28Q9P2N2 729 aa20.28■□□□□ 0.84
CLN6-204ENST00000564752 RBM19Q9Y4C8 960 aaKnown RBP20.28■□□□□ 0.84
CLN6-204ENST00000564752 ZFP37Q9Y6Q3 630 aaPredicted RBP20.28■□□□□ 0.84
CLN6-204ENST00000564752 PHLPP2Q6ZVD8 1323 aa20.27■□□□□ 0.84
CLN6-204ENST00000564752 KRBA1A5PL33 1030 aa20.27■□□□□ 0.84
CLN6-204ENST00000564752 K7ELQ4 463 aaPredicted RBP20.27■□□□□ 0.84
CLN6-204ENST00000564752 C8AP07357 584 aa20.27■□□□□ 0.84
CLN6-204ENST00000564752 OR1D2P34982 312 aa20.27■□□□□ 0.84
CLN6-204ENST00000564752 NBL1P41271 181 aa20.27■□□□□ 0.84
CLN6-204ENST00000564752 YARSP54577 528 aaKnown RBP20.27■□□□□ 0.84
CLN6-204ENST00000564752 MAPK7Q13164 816 aa20.27■□□□□ 0.84
CLN6-204ENST00000564752 DMP1Q13316 513 aaPredicted RBP20.27■□□□□ 0.84
CLN6-204ENST00000564752 HTR4Q13639 388 aa20.27■□□□□ 0.84
CLN6-204ENST00000564752 UVSSAQ2YD98 709 aa20.27■□□□□ 0.84
CLN6-204ENST00000564752 KCNK18Q7Z418 384 aa20.27■□□□□ 0.84
CLN6-204ENST00000564752 CEP120Q8N960 986 aa20.27■□□□□ 0.84
CLN6-204ENST00000564752 DRC1Q96MC2 740 aa20.27■□□□□ 0.84
CLN6-204ENST00000564752 NTPCRQ9BSD7 190 aaKnown RBP20.27■□□□□ 0.84
CLN6-204ENST00000564752 CCDC94Q9BW85 323 aaPredicted RBP20.27■□□□□ 0.84
CLN6-204ENST00000564752 MRPL4Q9BYD3 311 aaKnown RBP20.27■□□□□ 0.84
CLN6-204ENST00000564752 CDT1Q9H211 546 aa20.27■□□□□ 0.84
CLN6-204ENST00000564752 C17orf75Q9HAS0 396 aa20.27■□□□□ 0.84
CLN6-204ENST00000564752 KMT5AQ9NQR1 393 aa20.27■□□□□ 0.84
CLN6-204ENST00000564752 MTRRQ9UBK8 725 aa20.27■□□□□ 0.84
CLN6-204ENST00000564752 MTCL1Q9Y4B5 1905 aaKnown RBP20.26■□□□□ 0.83
CLN6-204ENST00000564752 TRAPPC3O43617 180 aa20.26■□□□□ 0.83
CLN6-204ENST00000564752 NTHL1P78549 312 aa20.26■□□□□ 0.83
CLN6-204ENST00000564752 HYIQ5T013 277 aa20.26■□□□□ 0.83
CLN6-204ENST00000564752 RSPO2Q6UXX9 243 aaPredicted RBP20.26■□□□□ 0.83
CLN6-204ENST00000564752 CCDC105Q8IYK2 499 aa20.26■□□□□ 0.83
CLN6-204ENST00000564752 INTS4Q96HW7 963 aaKnown RBP20.26■□□□□ 0.83
CLN6-204ENST00000564752 AK8Q96MA6 479 aa20.26■□□□□ 0.83
CLN6-204ENST00000564752 TARS2Q9BW92 718 aaKnown RBP20.26■□□□□ 0.83
CLN6-204ENST00000564752 GOLGA2P5Q9HBQ8 144 aa20.26■□□□□ 0.83
CLN6-204ENST00000564752 TOPORSQ9NS56 1045 aaPredicted RBP20.26■□□□□ 0.83
CLN6-204ENST00000564752 GTF3C3Q9Y5Q9 886 aa20.26■□□□□ 0.83
CLN6-204ENST00000564752 BACE2Q9Y5Z0 518 aa20.26■□□□□ 0.83
CLN6-204ENST00000564752 MYH11P35749 1972 aa20.26■□□□□ 0.83
CLN6-204ENST00000564752 VPS13AQ96RL7 3174 aa20.25■□□□□ 0.83
CLN6-204ENST00000564752 ABLIM1O14639 778 aa20.25■□□□□ 0.83
CLN6-204ENST00000564752 CCL16O15467 120 aa20.25■□□□□ 0.83
CLN6-204ENST00000564752 XYLBO75191 536 aa20.25■□□□□ 0.83
CLN6-204ENST00000564752 POU2F2P09086 479 aa20.25■□□□□ 0.83
CLN6-204ENST00000564752 MCF2P10911 925 aa20.25■□□□□ 0.83
CLN6-204ENST00000564752 PROZP22891 400 aa20.25■□□□□ 0.83
CLN6-204ENST00000564752 TKTP29401 623 aaKnown RBP20.25■□□□□ 0.83
CLN6-204ENST00000564752 OSTNP61366 133 aa20.25■□□□□ 0.83
CLN6-204ENST00000564752 SOX4Q06945 474 aaPredicted RBP20.25■□□□□ 0.83
CLN6-204ENST00000564752 ZNF568Q3ZCX4 644 aa20.25■□□□□ 0.83
CLN6-204ENST00000564752 AXDND1Q5T1B0 1012 aaPredicted RBP20.25■□□□□ 0.83
CLN6-204ENST00000564752 KCTD17Q8N5Z5 321 aa20.25■□□□□ 0.83
CLN6-204ENST00000564752 DTWD2Q8NBA8 298 aa20.25■□□□□ 0.83
CLN6-204ENST00000564752 C3orf58Q8NDZ4 430 aa20.25■□□□□ 0.83
CLN6-204ENST00000564752 SLC7A14Q8TBB6 771 aa20.25■□□□□ 0.83
CLN6-204ENST00000564752 GPR152Q8TDT2 470 aa20.25■□□□□ 0.83
CLN6-204ENST00000564752 DDX27Q96GQ7 796 aaKnown RBP20.25■□□□□ 0.83
CLN6-204ENST00000564752 PNMA5Q96PV4 448 aa20.25■□□□□ 0.83
CLN6-204ENST00000564752 PLIN2Q99541 437 aa20.25■□□□□ 0.83
CLN6-204ENST00000564752 TIPINQ9BVW5 301 aa20.25■□□□□ 0.83
CLN6-204ENST00000564752 CDH7Q9ULB5 785 aa20.25■□□□□ 0.83
CLN6-204ENST00000564752 CDY1Q9Y6F8 540 aa20.25■□□□□ 0.83
CLN6-204ENST00000564752 NUMBLQ9Y6R0 609 aa20.25■□□□□ 0.83
CLN6-204ENST00000564752 PTPRZ1P23471 2315 aaPredicted RBP20.24■□□□□ 0.83
CLN6-204ENST00000564752 DOCK8Q8NF50 2099 aa20.24■□□□□ 0.83
CLN6-204ENST00000564752 SFI1A8K8P3 1242 aa20.24■□□□□ 0.83
CLN6-204ENST00000564752 STK25O00506 426 aa20.24■□□□□ 0.83
CLN6-204ENST00000564752 SYT1P21579 422 aa20.24■□□□□ 0.83
CLN6-204ENST00000564752 GUCY2CP25092 1073 aa20.24■□□□□ 0.83
CLN6-204ENST00000564752 BRCC3P46736 316 aa20.24■□□□□ 0.83
CLN6-204ENST00000564752 SF3A1Q15459 793 aaKnown RBP20.24■□□□□ 0.83
CLN6-204ENST00000564752 ANKS3Q6ZW76 656 aa20.24■□□□□ 0.83
CLN6-204ENST00000564752 RTL10Q7L3V2 364 aa20.24■□□□□ 0.83
CLN6-204ENST00000564752 ST13P5Q8NFI4 369 aaPredicted RBP20.24■□□□□ 0.83
CLN6-204ENST00000564752 ZMAT2Q96NC0 199 aaKnown RBP20.24■□□□□ 0.83
CLN6-204ENST00000564752 ACAP3Q96P50 834 aa20.24■□□□□ 0.83
CLN6-204ENST00000564752 TCHPQ9BT92 498 aa20.24■□□□□ 0.83
CLN6-204ENST00000564752 SLC2A4RGQ9NR83 387 aa20.24■□□□□ 0.83
CLN6-204ENST00000564752 FOXD4L1Q9NU39 408 aa20.24■□□□□ 0.83
CLN6-204ENST00000564752 SLC38A7Q9NVC3 462 aa20.24■□□□□ 0.83
CLN6-204ENST00000564752 CA14Q9ULX7 337 aa20.24■□□□□ 0.83
CLN6-204ENST00000564752 I3L4J1 428 aa20.23■□□□□ 0.83
CLN6-204ENST00000564752 SLC16A4O15374 487 aa20.23■□□□□ 0.83
CLN6-204ENST00000564752 KCNE1P15382 129 aa20.23■□□□□ 0.83
CLN6-204ENST00000564752 UBA7P41226 1012 aa20.23■□□□□ 0.83
CLN6-204ENST00000564752 TMEM119Q4V9L6 283 aa20.23■□□□□ 0.83
CLN6-204ENST00000564752 PARM1Q6UWI2 310 aa20.23■□□□□ 0.83
CLN6-204ENST00000564752 MPZL3Q6UWV2 235 aa20.23■□□□□ 0.83
CLN6-204ENST00000564752 ASCL5Q7RTU5 278 aa20.23■□□□□ 0.83
CLN6-204ENST00000564752 SPIRE2Q8WWL2 714 aa20.23■□□□□ 0.83
CLN6-204ENST00000564752 FGF13Q92913 245 aa20.23■□□□□ 0.83
CLN6-204ENST00000564752 FGF14Q92915 247 aa20.23■□□□□ 0.83
CLN6-204ENST00000564752 RPP25Q9BUL9 199 aaKnown RBP20.23■□□□□ 0.83
CLN6-204ENST00000564752 KCNG1Q9UIX4 513 aa20.23■□□□□ 0.83
CLN6-204ENST00000564752 POLIQ9UNA4 740 aa20.23■□□□□ 0.83
CLN6-204ENST00000564752 RIF1Q5UIP0 2472 aaKnown RBP20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms