RNA–Protein interactions for RNA: ENST00000564678.1

HERPUD1-209, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 2,199 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-209ENST00000564678 SUPT20HL2P0C7V6 817 aa7.81□□□□□ -1.16
HERPUD1-209ENST00000564678 TGFB3P10600 412 aa7.81□□□□□ -1.16
HERPUD1-209ENST00000564678 GZMAP12544 262 aa7.81□□□□□ -1.16
HERPUD1-209ENST00000564678 ADSSP30520 456 aa7.81□□□□□ -1.16
HERPUD1-209ENST00000564678 AARSP49588 968 aaKnown RBP eCLIP7.81□□□□□ -1.16
HERPUD1-209ENST00000564678 GPC3P51654 580 aa7.81□□□□□ -1.16
HERPUD1-209ENST00000564678 MFAP3P55082 362 aa7.81□□□□□ -1.16
HERPUD1-209ENST00000564678 DLG4P78352 724 aa7.81□□□□□ -1.16
HERPUD1-209ENST00000564678 CLUL1Q15846 466 aa7.81□□□□□ -1.16
HERPUD1-209ENST00000564678 PUS10Q3MIT2 529 aaKnown RBP7.81□□□□□ -1.16
HERPUD1-209ENST00000564678 HSP90B2PQ58FF3 399 aa7.81□□□□□ -1.16
HERPUD1-209ENST00000564678 C8orf74Q6P047 294 aa7.81□□□□□ -1.16
HERPUD1-209ENST00000564678 EMBQ6PCB8 327 aa7.81□□□□□ -1.16
HERPUD1-209ENST00000564678 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.81□□□□□ -1.16
HERPUD1-209ENST00000564678 PEX26Q7Z412 305 aa7.81□□□□□ -1.16
HERPUD1-209ENST00000564678 RIOX2Q8IUF8 465 aa7.81□□□□□ -1.16
HERPUD1-209ENST00000564678 RHOT2Q8IXI1 618 aa7.81□□□□□ -1.16
HERPUD1-209ENST00000564678 USP38Q8NB14 1042 aa7.81□□□□□ -1.16
HERPUD1-209ENST00000564678 OLIG1Q8TAK6 271 aa7.81□□□□□ -1.16
HERPUD1-209ENST00000564678 FAM71BQ8TC56 605 aa7.81□□□□□ -1.16
HERPUD1-209ENST00000564678 AGPAT1Q99943 283 aa7.81□□□□□ -1.16
HERPUD1-209ENST00000564678 TMEM117Q9H0C3 514 aa7.81□□□□□ -1.16
HERPUD1-209ENST00000564678 ISCUQ9H1K1 167 aa7.81□□□□□ -1.16
HERPUD1-209ENST00000564678 TMEM8AQ9HCN3 771 aa7.81□□□□□ -1.16
HERPUD1-209ENST00000564678 PDE11AQ9HCR9 933 aa7.81□□□□□ -1.16
HERPUD1-209ENST00000564678 ADARB2Q9NS39 739 aaKnown RBP7.81□□□□□ -1.16
HERPUD1-209ENST00000564678 ARHGAP28Q9P2N2 729 aa7.81□□□□□ -1.16
HERPUD1-209ENST00000564678 STXBP5LQ9Y2K9 1186 aa7.81□□□□□ -1.16
HERPUD1-209ENST00000564678 NCANO14594 1321 aa7.81□□□□□ -1.16
HERPUD1-209ENST00000564678 IGKV6D-21A0A0A0MT36 114 aa7.81□□□□□ -1.16
HERPUD1-209ENST00000564678 TMEM150BA6NC51 233 aa7.81□□□□□ -1.16
HERPUD1-209ENST00000564678 ZC3H11AO75152 810 aaKnown RBP eCLIP7.81□□□□□ -1.16
HERPUD1-209ENST00000564678 POU3F3P20264 500 aaPredicted RBP7.81□□□□□ -1.16
HERPUD1-209ENST00000564678 GCLMP48507 274 aa7.81□□□□□ -1.16
HERPUD1-209ENST00000564678 EPHB4P54760 987 aa7.81□□□□□ -1.16
HERPUD1-209ENST00000564678 TNNC1P63316 161 aa7.81□□□□□ -1.16
HERPUD1-209ENST00000564678 PPATQ06203 517 aa7.81□□□□□ -1.16
HERPUD1-209ENST00000564678 NNTQ13423 1086 aa7.81□□□□□ -1.16
HERPUD1-209ENST00000564678 SQSTM1Q13501 440 aa7.81□□□□□ -1.16
HERPUD1-209ENST00000564678 ARHGAP44Q17R89 818 aa7.81□□□□□ -1.16
HERPUD1-209ENST00000564678 ENOSF1Q7L5Y1 443 aa7.81□□□□□ -1.16
HERPUD1-209ENST00000564678 CCDC60Q8IWA6 550 aaPredicted RBP7.81□□□□□ -1.16
HERPUD1-209ENST00000564678 IFT20Q8IY31 132 aa7.81□□□□□ -1.16
HERPUD1-209ENST00000564678 ANKRD35Q8N283 1001 aa7.81□□□□□ -1.16
HERPUD1-209ENST00000564678 GPD1LQ8N335 351 aa7.81□□□□□ -1.16
HERPUD1-209ENST00000564678 RASGEF1CQ8N431 466 aa7.81□□□□□ -1.16
HERPUD1-209ENST00000564678 AENQ8WTP8 325 aaKnown RBP7.81□□□□□ -1.16
HERPUD1-209ENST00000564678 EMID1Q96A84 441 aaPredicted RBP7.81□□□□□ -1.16
HERPUD1-209ENST00000564678 CEP89Q96ST8 783 aa7.81□□□□□ -1.16
HERPUD1-209ENST00000564678 PSMB7Q99436 277 aa7.81□□□□□ -1.16
HERPUD1-209ENST00000564678 SH2D3AQ9BRG2 576 aa7.81□□□□□ -1.16
HERPUD1-209ENST00000564678 SUGCTQ9HAC7 445 aa7.81□□□□□ -1.16
HERPUD1-209ENST00000564678 RBM12Q9NTZ6 932 aaKnown RBP7.81□□□□□ -1.16
HERPUD1-209ENST00000564678 GEMIN8Q9NWZ8 242 aaKnown RBP7.81□□□□□ -1.16
HERPUD1-209ENST00000564678 PSD3Q9NYI0 1048 aa7.81□□□□□ -1.16
HERPUD1-209ENST00000564678 AMFRQ9UKV5 643 aa7.81□□□□□ -1.16
HERPUD1-209ENST00000564678 TTC7AQ9ULT0 858 aaPredicted RBP7.81□□□□□ -1.16
HERPUD1-209ENST00000564678 CSADQ9Y600 493 aa7.81□□□□□ -1.16
HERPUD1-209ENST00000564678 SNCAIPQ9Y6H5 919 aa7.81□□□□□ -1.16
HERPUD1-209ENST00000564678 SSC5DA1L4H1 1573 aa7.81□□□□□ -1.16
HERPUD1-209ENST00000564678 LOC285556D6RIA3 1793 aa7.8□□□□□ -1.16
HERPUD1-209ENST00000564678 LRRIQ3A6PVS8 624 aaPredicted RBP7.8□□□□□ -1.16
HERPUD1-209ENST00000564678 TISP43B9A030 160 aa7.8□□□□□ -1.16
HERPUD1-209ENST00000564678 ANKRD63C9JTQ0 380 aa7.8□□□□□ -1.16
HERPUD1-209ENST00000564678 CCDC188H7C350 402 aa7.8□□□□□ -1.16
HERPUD1-209ENST00000564678 CXCL11O14625 94 aa7.8□□□□□ -1.16
HERPUD1-209ENST00000564678 KCNK3O14649 394 aa7.8□□□□□ -1.16
HERPUD1-209ENST00000564678 EDNRBP24530 442 aa7.8□□□□□ -1.16
HERPUD1-209ENST00000564678 PRKCEQ02156 737 aa7.8□□□□□ -1.16
HERPUD1-209ENST00000564678 VGLL4Q14135 290 aa7.8□□□□□ -1.16
HERPUD1-209ENST00000564678 NEDD9Q14511 834 aa7.8□□□□□ -1.16
HERPUD1-209ENST00000564678 PPP2R5EQ16537 467 aa7.8□□□□□ -1.16
HERPUD1-209ENST00000564678 RNF19BQ6ZMZ0 732 aa7.8□□□□□ -1.16
HERPUD1-209ENST00000564678 DAAM2Q86T65 1068 aa7.8□□□□□ -1.16
HERPUD1-209ENST00000564678 NT5DC3Q86UY8 548 aa7.8□□□□□ -1.16
HERPUD1-209ENST00000564678 FAM71AQ8IYT1 594 aa7.8□□□□□ -1.16
HERPUD1-209ENST00000564678 FBXL13Q8NEE6 735 aa7.8□□□□□ -1.16
HERPUD1-209ENST00000564678 NLGN2Q8NFZ4 835 aa7.8□□□□□ -1.16
HERPUD1-209ENST00000564678 SLC35G2Q8TBE7 412 aa7.8□□□□□ -1.16
HERPUD1-209ENST00000564678 PLEKHO2Q8TD55 490 aa7.8□□□□□ -1.16
HERPUD1-209ENST00000564678 SCFD2Q8WU76 684 aa7.8□□□□□ -1.16
HERPUD1-209ENST00000564678 POMGNT1Q8WZA1 660 aa7.8□□□□□ -1.16
HERPUD1-209ENST00000564678 EXOC4Q96A65 974 aa7.8□□□□□ -1.16
HERPUD1-209ENST00000564678 DCPSQ96C86 337 aaKnown RBP7.8□□□□□ -1.16
HERPUD1-209ENST00000564678 HES6Q96HZ4 224 aa7.8□□□□□ -1.16
HERPUD1-209ENST00000564678 MS4A14Q96JA4 679 aa7.8□□□□□ -1.16
HERPUD1-209ENST00000564678 SCYL1Q96KG9 808 aa7.8□□□□□ -1.16
HERPUD1-209ENST00000564678 NIFKQ9BYG3 293 aaKnown RBP7.8□□□□□ -1.16
HERPUD1-209ENST00000564678 XPNPEP1Q9NQW7 623 aa7.8□□□□□ -1.16
HERPUD1-209ENST00000564678 ZNF302Q9NR11 478 aa7.8□□□□□ -1.16
HERPUD1-209ENST00000564678 GDF3Q9NR23 364 aa7.8□□□□□ -1.16
HERPUD1-209ENST00000564678 FZD1Q9UP38 647 aa7.8□□□□□ -1.16
HERPUD1-209ENST00000564678 STYXL1Q9Y6J8 313 aa7.8□□□□□ -1.16
HERPUD1-209ENST00000564678 ZNF233A6NK53 670 aa7.8□□□□□ -1.16
HERPUD1-209ENST00000564678 RTN2O75298 545 aa7.8□□□□□ -1.16
HERPUD1-209ENST00000564678 STAU1O95793 577 aaKnown RBP7.8□□□□□ -1.16
HERPUD1-209ENST00000564678 SLC25A27O95847 323 aa7.8□□□□□ -1.16
HERPUD1-209ENST00000564678 PIGRP01833 764 aa7.8□□□□□ -1.16
HERPUD1-209ENST00000564678 ADRB2P07550 413 aa7.8□□□□□ -1.16
HERPUD1-209ENST00000564678 CFHP08603 1231 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms