RNA–Protein interactions for RNA: ENST00000564676.5

CDH1-206, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-206ENST00000564676 PLEKHA5Q9HAU0 1116 aa10.84□□□□□ -0.67
CDH1-206ENST00000564676 MRPL17Q9NRX2 175 aaKnown RBP10.84□□□□□ -0.67
CDH1-206ENST00000564676 USP25Q9UHP3 1055 aa10.84□□□□□ -0.67
CDH1-206ENST00000564676 ADAM28Q9UKQ2 775 aa10.84□□□□□ -0.67
CDH1-206ENST00000564676 SSX2IPQ9Y2D8 614 aa10.84□□□□□ -0.67
CDH1-206ENST00000564676 EYSQ5T1H1 3165 aa10.84□□□□□ -0.67
CDH1-206ENST00000564676 A0A1W2PQ27 194 aa10.83□□□□□ -0.68
CDH1-206ENST00000564676 A0A1W2PQ64 194 aa10.83□□□□□ -0.68
CDH1-206ENST00000564676 A0A1W2PQD8 194 aa10.83□□□□□ -0.68
CDH1-206ENST00000564676 TISP43B9A030 160 aa10.83□□□□□ -0.68
CDH1-206ENST00000564676 TULP1O00294 542 aaPredicted RBP10.83□□□□□ -0.68
CDH1-206ENST00000564676 CLASP2O75122 1294 aaKnown RBP10.83□□□□□ -0.68
CDH1-206ENST00000564676 TBX10O75333 385 aa10.83□□□□□ -0.68
CDH1-206ENST00000564676 B3GAT3O94766 335 aa10.83□□□□□ -0.68
CDH1-206ENST00000564676 KIF4AO95239 1232 aa10.83□□□□□ -0.68
CDH1-206ENST00000564676 PYGBP11216 843 aa10.83□□□□□ -0.68
CDH1-206ENST00000564676 BMP1P13497 986 aa10.83□□□□□ -0.68
CDH1-206ENST00000564676 KCNE1P15382 129 aa10.83□□□□□ -0.68
CDH1-206ENST00000564676 TNFSF9P41273 254 aa10.83□□□□□ -0.68
CDH1-206ENST00000564676 GLUD2P49448 558 aa10.83□□□□□ -0.68
CDH1-206ENST00000564676 CASP5P51878 434 aa10.83□□□□□ -0.68
CDH1-206ENST00000564676 NDUFA8P51970 172 aa10.83□□□□□ -0.68
CDH1-206ENST00000564676 DLX2Q07687 328 aaPredicted RBP10.83□□□□□ -0.68
CDH1-206ENST00000564676 KCNA1Q09470 495 aa10.83□□□□□ -0.68
CDH1-206ENST00000564676 CUL4BQ13620 913 aa10.83□□□□□ -0.68
CDH1-206ENST00000564676 PTPN14Q15678 1187 aa10.83□□□□□ -0.68
CDH1-206ENST00000564676 NAB2Q15742 525 aa10.83□□□□□ -0.68
CDH1-206ENST00000564676 USP41Q3LFD5 358 aa10.83□□□□□ -0.68
CDH1-206ENST00000564676 PUS10Q3MIT2 529 aaKnown RBP10.83□□□□□ -0.68
CDH1-206ENST00000564676 FAM26FQ5R3K3 315 aa10.83□□□□□ -0.68
CDH1-206ENST00000564676 ZBTB41Q5SVQ8 909 aa10.83□□□□□ -0.68
CDH1-206ENST00000564676 PTCRAQ6ISU1 281 aaPredicted RBP10.83□□□□□ -0.68
CDH1-206ENST00000564676 LLGL2Q6P1M3 1020 aa10.83□□□□□ -0.68
CDH1-206ENST00000564676 CNNM4Q6P4Q7 775 aa10.83□□□□□ -0.68
CDH1-206ENST00000564676 DCLRE1AQ6PJP8 1040 aa10.83□□□□□ -0.68
CDH1-206ENST00000564676 UNC13DQ70J99 1090 aa10.83□□□□□ -0.68
CDH1-206ENST00000564676 TAS1R1Q7RTX1 841 aa10.83□□□□□ -0.68
CDH1-206ENST00000564676 GRAMD1CQ8IYS0 662 aa10.83□□□□□ -0.68
CDH1-206ENST00000564676 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.83□□□□□ -0.68
CDH1-206ENST00000564676 POMGNT1Q8WZA1 660 aa10.83□□□□□ -0.68
CDH1-206ENST00000564676 HPS3Q969F9 1004 aa10.83□□□□□ -0.68
CDH1-206ENST00000564676 DDX27Q96GQ7 796 aaKnown RBP10.83□□□□□ -0.68
CDH1-206ENST00000564676 PAGE5Q96GU1 130 aa10.83□□□□□ -0.68
CDH1-206ENST00000564676 UROC1Q96N76 676 aa10.83□□□□□ -0.68
CDH1-206ENST00000564676 ZMAT2Q96NC0 199 aaKnown RBP10.83□□□□□ -0.68
CDH1-206ENST00000564676 STRA6Q9BX79 667 aa10.83□□□□□ -0.68
CDH1-206ENST00000564676 EMILIN2Q9BXX0 1053 aa10.83□□□□□ -0.68
CDH1-206ENST00000564676 FGFBP2Q9BYJ0 223 aa10.83□□□□□ -0.68
CDH1-206ENST00000564676 GPR62Q9BZJ7 368 aa10.83□□□□□ -0.68
CDH1-206ENST00000564676 TMEM206Q9H813 350 aa10.83□□□□□ -0.68
CDH1-206ENST00000564676 CNTN3Q9P232 1028 aa10.83□□□□□ -0.68
CDH1-206ENST00000564676 CD207Q9UJ71 328 aa10.83□□□□□ -0.68
CDH1-206ENST00000564676 AGO2Q9UKV8 859 aaKnown RBP10.83□□□□□ -0.68
CDH1-206ENST00000564676 BARX2Q9UMQ3 279 aaPredicted RBP10.83□□□□□ -0.68
CDH1-206ENST00000564676 HPSEQ9Y251 543 aa10.83□□□□□ -0.68
CDH1-206ENST00000564676 IRAK3Q9Y616 596 aa10.83□□□□□ -0.68
CDH1-206ENST00000564676 SF3B1O75533 1304 aaKnown RBP eCLIP10.83□□□□□ -0.68
CDH1-206ENST00000564676 PVALEFA0A1B0GWK0 134 aa10.82□□□□□ -0.68
CDH1-206ENST00000564676 LACTBL1A8MY62 500 aa10.82□□□□□ -0.68
CDH1-206ENST00000564676 DLL1O00548 723 aa10.82□□□□□ -0.68
CDH1-206ENST00000564676 ACTN4O43707 911 aaKnown RBP10.82□□□□□ -0.68
CDH1-206ENST00000564676 GLP2RO95838 553 aa10.82□□□□□ -0.68
CDH1-206ENST00000564676 KLRC2P26717 231 aa10.82□□□□□ -0.68
CDH1-206ENST00000564676 ACOT2P49753 483 aa10.82□□□□□ -0.68
CDH1-206ENST00000564676 CLCNKBP51801 687 aa10.82□□□□□ -0.68
CDH1-206ENST00000564676 RBM10P98175 930 aaKnown RBP10.82□□□□□ -0.68
CDH1-206ENST00000564676 PPP2R3AQ06190 1150 aa10.82□□□□□ -0.68
CDH1-206ENST00000564676 SOX4Q06945 474 aaPredicted RBP10.82□□□□□ -0.68
CDH1-206ENST00000564676 SPAG1Q07617 926 aa10.82□□□□□ -0.68
CDH1-206ENST00000564676 ELAVL2Q12926 359 aaKnown RBP10.82□□□□□ -0.68
CDH1-206ENST00000564676 ENOX2Q16206 610 aaKnown RBP10.82□□□□□ -0.68
CDH1-206ENST00000564676 FAM171A1Q5VUB5 890 aa10.82□□□□□ -0.68
CDH1-206ENST00000564676 PPFIBP1Q86W92 1011 aa10.82□□□□□ -0.68
CDH1-206ENST00000564676 CEP57Q86XR8 500 aa10.82□□□□□ -0.68
CDH1-206ENST00000564676 RNF168Q8IYW5 571 aaPredicted RBP10.82□□□□□ -0.68
CDH1-206ENST00000564676 ADAMTS19Q8TE59 1207 aa10.82□□□□□ -0.68
CDH1-206ENST00000564676 RIN2Q8WYP3 895 aaPredicted RBP10.82□□□□□ -0.68
CDH1-206ENST00000564676 CASP10Q92851 521 aa10.82□□□□□ -0.68
CDH1-206ENST00000564676 C18orf25Q96B23 403 aaPredicted RBP10.82□□□□□ -0.68
CDH1-206ENST00000564676 B3GALT6Q96L58 329 aa10.82□□□□□ -0.68
CDH1-206ENST00000564676 KLHL5Q96PQ7 755 aa10.82□□□□□ -0.68
CDH1-206ENST00000564676 COL25A1Q9BXS0 654 aaPredicted RBP10.82□□□□□ -0.68
CDH1-206ENST00000564676 IKZF4Q9H2S9 585 aa10.82□□□□□ -0.68
CDH1-206ENST00000564676 GOLGA2P5Q9HBQ8 144 aa10.82□□□□□ -0.68
CDH1-206ENST00000564676 CIZ1Q9ULV3 898 aaPredicted RBP10.82□□□□□ -0.68
CDH1-206ENST00000564676 FAM50BQ9Y247 325 aa10.82□□□□□ -0.68
CDH1-206ENST00000564676 HCFC2Q9Y5Z7 792 aa10.82□□□□□ -0.68
CDH1-206ENST00000564676 STYXL1Q9Y6J8 313 aa10.82□□□□□ -0.68
CDH1-206ENST00000564676 FAM237AA0A1B0GTK4 181 aa10.81□□□□□ -0.68
CDH1-206ENST00000564676 TTC26A0AVF1 554 aa10.81□□□□□ -0.68
CDH1-206ENST00000564676 GRXCR2A6NFK2 248 aa10.81□□□□□ -0.68
CDH1-206ENST00000564676 TMEM189-UBE2V1I3L0A0 370 aa10.81□□□□□ -0.68
CDH1-206ENST00000564676 PODXLO00592 558 aa10.81□□□□□ -0.68
CDH1-206ENST00000564676 MEFVO15553 781 aaPredicted RBP10.81□□□□□ -0.68
CDH1-206ENST00000564676 XPOTO43592 962 aaKnown RBP10.81□□□□□ -0.68
CDH1-206ENST00000564676 TRAPPC3O43617 180 aa10.81□□□□□ -0.68
CDH1-206ENST00000564676 LILRB3O75022 631 aa10.81□□□□□ -0.68
CDH1-206ENST00000564676 ZNF202O95125 648 aa10.81□□□□□ -0.68
CDH1-206ENST00000564676 CNPP09543 421 aaKnown RBP10.81□□□□□ -0.68
CDH1-206ENST00000564676 RPL9P32969 192 aaKnown RBP10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms