RNA–Protein interactions for RNA: ENST00000564353.5

CLK3-215, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 2,847 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-215ENST00000564353 RGS20O76081 388 aa14.41□□□□□ -0.1
CLK3-215ENST00000564353 ACTN3Q08043 901 aaPredicted RBP14.41□□□□□ -0.1
CLK3-215ENST00000564353 CALCOCO2Q13137 446 aa14.41□□□□□ -0.1
CLK3-215ENST00000564353 ZKSCAN8Q15776 578 aaPredicted RBP14.41□□□□□ -0.1
CLK3-215ENST00000564353 TMEM270Q6UE05 265 aa14.41□□□□□ -0.1
CLK3-215ENST00000564353 TAS1R3Q7RTX0 852 aa14.41□□□□□ -0.1
CLK3-215ENST00000564353 MAP4K3Q8IVH8 894 aa14.41□□□□□ -0.1
CLK3-215ENST00000564353 TLCD1Q96CP7 247 aa14.41□□□□□ -0.1
CLK3-215ENST00000564353 MOV10L1Q9BXT6 1211 aaKnown RBP14.41□□□□□ -0.1
CLK3-215ENST00000564353 POLR3FQ9H1D9 316 aaPredicted RBP14.41□□□□□ -0.1
CLK3-215ENST00000564353 WNT8AQ9H1J5 351 aa14.41□□□□□ -0.1
CLK3-215ENST00000564353 XPNPEP1Q9NQW7 623 aa14.41□□□□□ -0.1
CLK3-215ENST00000564353 ZNRF3Q9ULT6 936 aa14.41□□□□□ -0.1
CLK3-215ENST00000564353 SUFUQ9UMX1 484 aa14.41□□□□□ -0.1
CLK3-215ENST00000564353 PCDHA10Q9Y5I2 948 aa14.41□□□□□ -0.1
CLK3-215ENST00000564353 LRRIQ4A6NIV6 560 aa14.4□□□□□ -0.1
CLK3-215ENST00000564353 WDR46O15213 610 aaKnown RBP14.4□□□□□ -0.1
CLK3-215ENST00000564353 DRD4P21917 467 aa14.4□□□□□ -0.1
CLK3-215ENST00000564353 MUTP22033 750 aa14.4□□□□□ -0.1
CLK3-215ENST00000564353 FAM133BQ5BKY9 247 aaKnown RBP14.4□□□□□ -0.1
CLK3-215ENST00000564353 EMC10Q5UCC4 262 aa14.4□□□□□ -0.1
CLK3-215ENST00000564353 GKAP1Q5VSY0 366 aaPredicted RBP14.4□□□□□ -0.1
CLK3-215ENST00000564353 MMS22LQ6ZRQ5 1243 aa14.4□□□□□ -0.1
CLK3-215ENST00000564353 EEPD1Q7L9B9 569 aa14.4□□□□□ -0.1
CLK3-215ENST00000564353 CHMP6Q96FZ7 201 aa14.4□□□□□ -0.1
CLK3-215ENST00000564353 C9orf72Q96LT7 481 aa14.4□□□□□ -0.1
CLK3-215ENST00000564353 CEP89Q96ST8 783 aa14.4□□□□□ -0.1
CLK3-215ENST00000564353 CXorf56Q9H5V9 222 aa14.4□□□□□ -0.1
CLK3-215ENST00000564353 INTS9Q9NV88 658 aaKnown RBP14.4□□□□□ -0.1
CLK3-215ENST00000564353 DIS3Q9Y2L1 958 aaKnown RBP14.4□□□□□ -0.1
CLK3-215ENST00000564353 MROH7Q68CQ1 1323 aa14.4□□□□□ -0.1
CLK3-215ENST00000564353 RBBP6Q7Z6E9 1792 aaKnown RBP14.4□□□□□ -0.1
CLK3-215ENST00000564353 A6NNZ2 444 aa14.4□□□□□ -0.1
CLK3-215ENST00000564353 VWA5AO00534 786 aa14.4□□□□□ -0.1
CLK3-215ENST00000564353 GH1P01241 217 aa14.4□□□□□ -0.1
CLK3-215ENST00000564353 CYP1A2P05177 515 aa14.4□□□□□ -0.1
CLK3-215ENST00000564353 MAPTP10636 758 aaKnown RBP14.4□□□□□ -0.1
CLK3-215ENST00000564353 RALAP11233 206 aa14.4□□□□□ -0.1
CLK3-215ENST00000564353 KRT10P13645 584 aa14.4□□□□□ -0.1
CLK3-215ENST00000564353 LIG4P49917 911 aa14.4□□□□□ -0.1
CLK3-215ENST00000564353 PRKCEQ02156 737 aa14.4□□□□□ -0.1
CLK3-215ENST00000564353 ADCY2Q08462 1091 aa14.4□□□□□ -0.1
CLK3-215ENST00000564353 TUBB8Q3ZCM7 444 aa14.4□□□□□ -0.1
CLK3-215ENST00000564353 ACAD10Q6JQN1 1059 aa14.4□□□□□ -0.1
CLK3-215ENST00000564353 DYDC1Q8WWB3 177 aa14.4□□□□□ -0.1
CLK3-215ENST00000564353 FNBP1Q96RU3 617 aa14.4□□□□□ -0.1
CLK3-215ENST00000564353 PCYOX1Q9UHG3 505 aa14.4□□□□□ -0.1
CLK3-215ENST00000564353 PGAP2Q9UHJ9 254 aa14.4□□□□□ -0.1
CLK3-215ENST00000564353 GTF3C4Q9UKN8 822 aa14.4□□□□□ -0.1
CLK3-215ENST00000564353 TTLL13PA6NNM8 815 aa14.39□□□□□ -0.11
CLK3-215ENST00000564353 ZBED4O75132 1171 aa14.39□□□□□ -0.11
CLK3-215ENST00000564353 CPP00450 1065 aa14.39□□□□□ -0.11
CLK3-215ENST00000564353 RFX1P22670 979 aa14.39□□□□□ -0.11
CLK3-215ENST00000564353 ADCY8P40145 1251 aa14.39□□□□□ -0.11
CLK3-215ENST00000564353 PIK3CAP42336 1068 aa14.39□□□□□ -0.11
CLK3-215ENST00000564353 TAS2R40P59535 323 aa14.39□□□□□ -0.11
CLK3-215ENST00000564353 C6orf89Q6UWU4 347 aa14.39□□□□□ -0.11
CLK3-215ENST00000564353 KCTD17Q8N5Z5 321 aa14.39□□□□□ -0.11
CLK3-215ENST00000564353 PSPC1Q8WXF1 523 aaKnown RBP14.39□□□□□ -0.11
CLK3-215ENST00000564353 RPS6KC1Q96S38 1066 aa14.39□□□□□ -0.11
CLK3-215ENST00000564353 AAASQ9NRG9 546 aa14.39□□□□□ -0.11
CLK3-215ENST00000564353 C1orf112Q9NSG2 853 aa14.39□□□□□ -0.11
CLK3-215ENST00000564353 DONSONQ9NYP3 566 aa14.39□□□□□ -0.11
CLK3-215ENST00000564353 EXOC7Q9UPT5 735 aa14.39□□□□□ -0.11
CLK3-215ENST00000564353 PASKQ96RG2 1323 aa14.39□□□□□ -0.11
CLK3-215ENST00000564353 TP73O15350 636 aa14.39□□□□□ -0.11
CLK3-215ENST00000564353 GZMAP12544 262 aa14.39□□□□□ -0.11
CLK3-215ENST00000564353 ITGA8P53708 1063 aa14.39□□□□□ -0.11
CLK3-215ENST00000564353 SP2Q02086 613 aa14.39□□□□□ -0.11
CLK3-215ENST00000564353 AUHQ13825 339 aaKnown RBP14.39□□□□□ -0.11
CLK3-215ENST00000564353 CLEC16AQ2KHT3 1053 aa14.39□□□□□ -0.11
CLK3-215ENST00000564353 CYP4F22Q6NT55 531 aa14.39□□□□□ -0.11
CLK3-215ENST00000564353 CDR2LQ86X02 465 aaPredicted RBP14.39□□□□□ -0.11
CLK3-215ENST00000564353 GPD1LQ8N335 351 aa14.39□□□□□ -0.11
CLK3-215ENST00000564353 TEPSINQ96N21 525 aa14.39□□□□□ -0.11
CLK3-215ENST00000564353 HAPLN2Q9GZV7 340 aa14.39□□□□□ -0.11
CLK3-215ENST00000564353 C10orf88Q9H8K7 445 aa14.39□□□□□ -0.11
CLK3-215ENST00000564353 ZSCAN5DPP0CG00 497 aa14.38□□□□□ -0.11
CLK3-215ENST00000564353 DSG3P32926 999 aa14.38□□□□□ -0.11
CLK3-215ENST00000564353 GPC3P51654 580 aa14.38□□□□□ -0.11
CLK3-215ENST00000564353 ERMARDQ5T6L9 678 aa14.38□□□□□ -0.11
CLK3-215ENST00000564353 TDRD10Q5VZ19 366 aaKnown RBP14.38□□□□□ -0.11
CLK3-215ENST00000564353 ZBTB33Q86T24 672 aa14.38□□□□□ -0.11
CLK3-215ENST00000564353 SPIRE2Q8WWL2 714 aa14.38□□□□□ -0.11
CLK3-215ENST00000564353 KIFAP3Q92845 792 aa14.38□□□□□ -0.11
CLK3-215ENST00000564353 TARS2Q9BW92 718 aaKnown RBP14.38□□□□□ -0.11
CLK3-215ENST00000564353 FAM129AQ9BZQ8 928 aa14.38□□□□□ -0.11
CLK3-215ENST00000564353 PODXLO00592 558 aa14.38□□□□□ -0.11
CLK3-215ENST00000564353 P4HA2O15460 535 aa14.38□□□□□ -0.11
CLK3-215ENST00000564353 HLA-DRAP01903 254 aa14.38□□□□□ -0.11
CLK3-215ENST00000564353 EDN1P05305 212 aa14.38□□□□□ -0.11
CLK3-215ENST00000564353 ETS1P14921 441 aa14.38□□□□□ -0.11
CLK3-215ENST00000564353 NSFP46459 744 aaKnown RBP14.38□□□□□ -0.11
CLK3-215ENST00000564353 EIF3BP55884 814 aaKnown RBP14.38□□□□□ -0.11
CLK3-215ENST00000564353 MYBPC2Q14324 1141 aa14.38□□□□□ -0.11
CLK3-215ENST00000564353 RTKN2Q8IZC4 609 aa14.38□□□□□ -0.11
CLK3-215ENST00000564353 MCOLN2Q8IZK6 566 aa14.38□□□□□ -0.11
CLK3-215ENST00000564353 GLIS1Q8NBF1 620 aa14.38□□□□□ -0.11
CLK3-215ENST00000564353 C1orf131Q8NDD1 294 aaKnown RBP14.38□□□□□ -0.11
CLK3-215ENST00000564353 ATXN2LQ8WWM7 1075 aaKnown RBP14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms