RNA–Protein interactions for RNA: ENST00000564260.1

RNF40-206, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-206ENST00000564260 DMAC2Q9NW81 257 aa18.13■□□□□ 0.49
RNF40-206ENST00000564260 RBAKQ9NYW8 714 aaPredicted RBP18.13■□□□□ 0.49
RNF40-206ENST00000564260 DNAJB4Q9UDY4 337 aa18.13■□□□□ 0.49
RNF40-206ENST00000564260 EPOPA6NHQ4 379 aa18.12■□□□□ 0.49
RNF40-206ENST00000564260 TISP43B9A030 160 aa18.12■□□□□ 0.49
RNF40-206ENST00000564260 PSMA7O14818 248 aa18.12■□□□□ 0.49
RNF40-206ENST00000564260 TRAPPC3O43617 180 aa18.12■□□□□ 0.49
RNF40-206ENST00000564260 NCK2O43639 380 aa18.12■□□□□ 0.49
RNF40-206ENST00000564260 LRPAP1P30533 357 aa18.12■□□□□ 0.49
RNF40-206ENST00000564260 TNFSF9P41273 254 aa18.12■□□□□ 0.49
RNF40-206ENST00000564260 OR1G1P47890 313 aa18.12■□□□□ 0.49
RNF40-206ENST00000564260 ACOT2P49753 483 aa18.12■□□□□ 0.49
RNF40-206ENST00000564260 MORC3Q14149 939 aa18.12■□□□□ 0.49
RNF40-206ENST00000564260 SNRNP35Q16560 246 aaKnown RBP18.12■□□□□ 0.49
RNF40-206ENST00000564260 CENPPQ6IPU0 288 aa18.12■□□□□ 0.49
RNF40-206ENST00000564260 DCLRE1AQ6PJP8 1040 aa18.12■□□□□ 0.49
RNF40-206ENST00000564260 ADSSL1Q8N142 457 aa18.12■□□□□ 0.49
RNF40-206ENST00000564260 BEST2Q8NFU1 509 aa18.12■□□□□ 0.49
RNF40-206ENST00000564260 GDPD5Q8WTR4 605 aa18.12■□□□□ 0.49
RNF40-206ENST00000564260 CACTINQ8WUQ7 758 aaKnown RBP18.12■□□□□ 0.49
RNF40-206ENST00000564260 TLR9Q9NR96 1032 aa18.12■□□□□ 0.49
RNF40-206ENST00000564260 MAN1B1Q9UKM7 699 aa18.12■□□□□ 0.49
RNF40-206ENST00000564260 ADAM28Q9UKQ2 775 aa18.12■□□□□ 0.49
RNF40-206ENST00000564260 IRAK3Q9Y616 596 aa18.12■□□□□ 0.49
RNF40-206ENST00000564260 SF3B1O75533 1304 aaKnown RBP eCLIP18.12■□□□□ 0.49
RNF40-206ENST00000564260 LACTBL1A8MY62 500 aa18.11■□□□□ 0.49
RNF40-206ENST00000564260 EFEMP2O95967 443 aa18.11■□□□□ 0.49
RNF40-206ENST00000564260 MCM4P33991 863 aa18.11■□□□□ 0.49
RNF40-206ENST00000564260 TMEM132DQ14C87 1099 aa18.11■□□□□ 0.49
RNF40-206ENST00000564260 UPP1Q16831 310 aa18.11■□□□□ 0.49
RNF40-206ENST00000564260 ZCWPW2Q504Y3 356 aa18.11■□□□□ 0.49
RNF40-206ENST00000564260 CT47A1Q5JQC4 288 aaPredicted RBP18.11■□□□□ 0.49
RNF40-206ENST00000564260 ZBTB41Q5SVQ8 909 aa18.11■□□□□ 0.49
RNF40-206ENST00000564260 SPATA1Q5VX52 437 aa18.11■□□□□ 0.49
RNF40-206ENST00000564260 SPRED2Q7Z698 418 aa18.11■□□□□ 0.49
RNF40-206ENST00000564260 RNF168Q8IYW5 571 aaPredicted RBP18.11■□□□□ 0.49
RNF40-206ENST00000564260 POF1BQ8WVV4 589 aa18.11■□□□□ 0.49
RNF40-206ENST00000564260 KIF12Q96FN5 646 aa18.11■□□□□ 0.49
RNF40-206ENST00000564260 FAM161BQ96MY7 647 aa18.11■□□□□ 0.49
RNF40-206ENST00000564260 ZMAT2Q96NC0 199 aaKnown RBP18.11■□□□□ 0.49
RNF40-206ENST00000564260 TSG101Q99816 390 aa18.11■□□□□ 0.49
RNF40-206ENST00000564260 MKNK1Q9BUB5 465 aa18.11■□□□□ 0.49
RNF40-206ENST00000564260 HCSTQ9UBK5 93 aa18.11■□□□□ 0.49
RNF40-206ENST00000564260 FRMD4BQ9Y2L6 1034 aa18.11■□□□□ 0.49
RNF40-206ENST00000564260 MTCH2Q9Y6C9 303 aa18.11■□□□□ 0.49
RNF40-206ENST00000564260 NLRC5Q86WI3 1866 aa18.11■□□□□ 0.49
RNF40-206ENST00000564260 BICDL2A1A5D9 508 aa18.1■□□□□ 0.49
RNF40-206ENST00000564260 ARHGEF37A1IGU5 675 aa18.1■□□□□ 0.49
RNF40-206ENST00000564260 MEFVO15553 781 aaPredicted RBP18.1■□□□□ 0.49
RNF40-206ENST00000564260 B4GALT3O60512 393 aa18.1■□□□□ 0.49
RNF40-206ENST00000564260 EXOC3O60645 756 aa18.1■□□□□ 0.49
RNF40-206ENST00000564260 C1RP00736 705 aa18.1■□□□□ 0.49
RNF40-206ENST00000564260 NR3C1P04150 777 aa18.1■□□□□ 0.49
RNF40-206ENST00000564260 SOD2P04179 222 aa18.1■□□□□ 0.49
RNF40-206ENST00000564260 PRCPP42785 496 aa18.1■□□□□ 0.49
RNF40-206ENST00000564260 AP3M2P53677 418 aa18.1■□□□□ 0.49
RNF40-206ENST00000564260 CREMQ03060 361 aa18.1■□□□□ 0.49
RNF40-206ENST00000564260 SEZ6Q53EL9 994 aa18.1■□□□□ 0.49
RNF40-206ENST00000564260 PDXDC1Q6P996 788 aa18.1■□□□□ 0.49
RNF40-206ENST00000564260 SAAL1Q96ER3 474 aa18.1■□□□□ 0.49
RNF40-206ENST00000564260 CDCA3Q99618 268 aaPredicted RBP18.1■□□□□ 0.49
RNF40-206ENST00000564260 IKZF4Q9H2S9 585 aa18.1■□□□□ 0.49
RNF40-206ENST00000564260 MARCH5Q9NX47 278 aa18.1■□□□□ 0.49
RNF40-206ENST00000564260 FSCN2O14926 492 aa18.09■□□□□ 0.49
RNF40-206ENST00000564260 GRM6O15303 877 aa18.09■□□□□ 0.49
RNF40-206ENST00000564260 TADA2AO75478 443 aa18.09■□□□□ 0.49
RNF40-206ENST00000564260 CTSAP10619 480 aa18.09■□□□□ 0.49
RNF40-206ENST00000564260 MCCD1P59942 119 aaPredicted RBP18.09■□□□□ 0.49
RNF40-206ENST00000564260 ADGRE1Q14246 886 aa18.09■□□□□ 0.49
RNF40-206ENST00000564260 SMC1AQ14683 1233 aaKnown RBP18.09■□□□□ 0.49
RNF40-206ENST00000564260 PSMD6Q15008 389 aa18.09■□□□□ 0.49
RNF40-206ENST00000564260 GLRA4Q5JXX5 417 aa18.09■□□□□ 0.49
RNF40-206ENST00000564260 RBM43Q6ZSC3 357 aaKnown RBP18.09■□□□□ 0.49
RNF40-206ENST00000564260 WDR49Q8IV35 697 aa18.09■□□□□ 0.49
RNF40-206ENST00000564260 MLKLQ8NB16 471 aa18.09■□□□□ 0.49
RNF40-206ENST00000564260 MYLIPQ8WY64 445 aa18.09■□□□□ 0.49
RNF40-206ENST00000564260 MFSD14AQ96MC6 490 aa18.09■□□□□ 0.49
RNF40-206ENST00000564260 HERC2P3Q9BVR0 1158 aa18.09■□□□□ 0.49
RNF40-206ENST00000564260 PCIF1Q9H4Z3 704 aa18.09■□□□□ 0.49
RNF40-206ENST00000564260 NSUN3Q9H649 340 aaKnown RBP18.09■□□□□ 0.49
RNF40-206ENST00000564260 ALG13Q9NP73 1137 aaKnown RBP18.09■□□□□ 0.49
RNF40-206ENST00000564260 PRG3Q9Y2Y8 225 aaPredicted RBP18.09■□□□□ 0.49
RNF40-206ENST00000564260 KIAA1671Q9BY89 1806 aa18.08■□□□□ 0.48
RNF40-206ENST00000564260 CASTOR2A6NHX0 329 aa18.08■□□□□ 0.48
RNF40-206ENST00000564260 PODXLO00592 558 aa18.08■□□□□ 0.48
RNF40-206ENST00000564260 B3GAT3O94766 335 aa18.08■□□□□ 0.48
RNF40-206ENST00000564260 NR2F2P24468 414 aa18.08■□□□□ 0.48
RNF40-206ENST00000564260 CCNE1P24864 410 aa18.08■□□□□ 0.48
RNF40-206ENST00000564260 PNPLA4P41247 253 aa18.08■□□□□ 0.48
RNF40-206ENST00000564260 FKBP3Q00688 224 aaKnown RBP18.08■□□□□ 0.48
RNF40-206ENST00000564260 CYP24A1Q07973 514 aa18.08■□□□□ 0.48
RNF40-206ENST00000564260 CAMK1Q14012 370 aa18.08■□□□□ 0.48
RNF40-206ENST00000564260 CAMK4Q16566 473 aa18.08■□□□□ 0.48
RNF40-206ENST00000564260 JADE1Q6IE81 842 aa18.08■□□□□ 0.48
RNF40-206ENST00000564260 INTS8Q75QN2 995 aaKnown RBP18.08■□□□□ 0.48
RNF40-206ENST00000564260 CBWD2Q8IUF1 395 aa18.08■□□□□ 0.48
RNF40-206ENST00000564260 ZC3H3Q8IXZ2 948 aaKnown RBP18.08■□□□□ 0.48
RNF40-206ENST00000564260 GPT2Q8TD30 523 aa18.08■□□□□ 0.48
RNF40-206ENST00000564260 SYAP1Q96A49 352 aaPredicted RBP18.08■□□□□ 0.48
RNF40-206ENST00000564260 FNBP1Q96RU3 617 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms