RNA–Protein interactions for RNA: ENST00000564247.1

CMTM3-208, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,127 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-208ENST00000564247 RGS18Q9NS28 235 aa18.39■□□□□ 0.53
CMTM3-208ENST00000564247 C1orf112Q9NSG2 853 aa18.39■□□□□ 0.53
CMTM3-208ENST00000564247 RNF216Q9NWF9 866 aaPredicted RBP18.39■□□□□ 0.53
CMTM3-208ENST00000564247 RBAKQ9NYW8 714 aaPredicted RBP18.39■□□□□ 0.53
CMTM3-208ENST00000564247 LMCD1Q9NZU5 365 aa18.39■□□□□ 0.53
CMTM3-208ENST00000564247 CPSF3Q9UKF6 684 aaKnown RBP18.39■□□□□ 0.53
CMTM3-208ENST00000564247 MTUS1Q9ULD2 1270 aa18.39■□□□□ 0.53
CMTM3-208ENST00000564247 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.39■□□□□ 0.53
CMTM3-208ENST00000564247 PES1O00541 588 aaKnown RBP18.38■□□□□ 0.53
CMTM3-208ENST00000564247 STX10O60499 249 aa18.38■□□□□ 0.53
CMTM3-208ENST00000564247 MGEA5O60502 916 aa18.38■□□□□ 0.53
CMTM3-208ENST00000564247 VAMP7P51809 220 aa18.38■□□□□ 0.53
CMTM3-208ENST00000564247 COPB1P53618 953 aaKnown RBP18.38■□□□□ 0.53
CMTM3-208ENST00000564247 UBASH3AP57075 661 aa18.38■□□□□ 0.53
CMTM3-208ENST00000564247 ENPEPQ07075 957 aa18.38■□□□□ 0.53
CMTM3-208ENST00000564247 CYP24A1Q07973 514 aa18.38■□□□□ 0.53
CMTM3-208ENST00000564247 BFSP1Q12934 665 aa18.38■□□□□ 0.53
CMTM3-208ENST00000564247 DSC3Q14574 896 aa18.38■□□□□ 0.53
CMTM3-208ENST00000564247 MAN2A1Q16706 1144 aa18.38■□□□□ 0.53
CMTM3-208ENST00000564247 SEZ6Q53EL9 994 aa18.38■□□□□ 0.53
CMTM3-208ENST00000564247 UBXN11Q5T124 520 aa18.38■□□□□ 0.53
CMTM3-208ENST00000564247 TCERG1LQ5VWI1 586 aa18.38■□□□□ 0.53
CMTM3-208ENST00000564247 CRELD2Q6UXH1 353 aaPredicted RBP18.38■□□□□ 0.53
CMTM3-208ENST00000564247 SLC24A5Q71RS6 500 aa18.38■□□□□ 0.53
CMTM3-208ENST00000564247 TRIM59Q8IWR1 403 aa18.38■□□□□ 0.53
CMTM3-208ENST00000564247 FIBCD1Q8N539 461 aa18.38■□□□□ 0.53
CMTM3-208ENST00000564247 TMC2Q8TDI7 906 aa18.38■□□□□ 0.53
CMTM3-208ENST00000564247 PPM1EQ8WY54 764 aa18.38■□□□□ 0.53
CMTM3-208ENST00000564247 ANP32BQ92688 251 aaKnown RBP18.38■□□□□ 0.53
CMTM3-208ENST00000564247 PGBD4Q96DM1 585 aa18.38■□□□□ 0.53
CMTM3-208ENST00000564247 FAM212AQ96EL1 285 aa18.38■□□□□ 0.53
CMTM3-208ENST00000564247 BORCS6Q96GS4 357 aa18.38■□□□□ 0.53
CMTM3-208ENST00000564247 FNBP1Q96RU3 617 aa18.38■□□□□ 0.53
CMTM3-208ENST00000564247 TRAIPQ9BWF2 469 aa18.38■□□□□ 0.53
CMTM3-208ENST00000564247 TRIM5Q9C035 493 aa18.38■□□□□ 0.53
CMTM3-208ENST00000564247 VPS16Q9H269 839 aa18.38■□□□□ 0.53
CMTM3-208ENST00000564247 PCDHB2Q9Y5E7 798 aa18.38■□□□□ 0.53
CMTM3-208ENST00000564247 IL18RAPO95256 599 aa18.37■□□□□ 0.53
CMTM3-208ENST00000564247 PSMD6Q15008 389 aa18.37■□□□□ 0.53
CMTM3-208ENST00000564247 CCDC85BQ15834 202 aaPredicted RBP18.37■□□□□ 0.53
CMTM3-208ENST00000564247 VWA3BQ502W6 1294 aa18.37■□□□□ 0.53
CMTM3-208ENST00000564247 EPC2Q52LR7 807 aa18.37■□□□□ 0.53
CMTM3-208ENST00000564247 DCAF17Q5H9S7 520 aaPredicted RBP18.37■□□□□ 0.53
CMTM3-208ENST00000564247 BRSK2Q8IWQ3 736 aa18.37■□□□□ 0.53
CMTM3-208ENST00000564247 CD302Q8IX05 232 aa18.37■□□□□ 0.53
CMTM3-208ENST00000564247 TMEM192Q8IY95 271 aa18.37■□□□□ 0.53
CMTM3-208ENST00000564247 FBXO22Q8NEZ5 403 aa18.37■□□□□ 0.53
CMTM3-208ENST00000564247 GDPD5Q8WTR4 605 aa18.37■□□□□ 0.53
CMTM3-208ENST00000564247 CCDC127Q96BQ5 260 aa18.37■□□□□ 0.53
CMTM3-208ENST00000564247 TOPORSQ9NS56 1045 aaPredicted RBP18.37■□□□□ 0.53
CMTM3-208ENST00000564247 FAM105AQ9NUU6 356 aa18.37■□□□□ 0.53
CMTM3-208ENST00000564247 SNTG2Q9NY99 539 aa18.37■□□□□ 0.53
CMTM3-208ENST00000564247 TAB2Q9NYJ8 693 aa18.37■□□□□ 0.53
CMTM3-208ENST00000564247 C9IYK1 514 aa18.36■□□□□ 0.53
CMTM3-208ENST00000564247 FAM189A1O60320 539 aa18.36■□□□□ 0.53
CMTM3-208ENST00000564247 ZNF623O75123 536 aa18.36■□□□□ 0.53
CMTM3-208ENST00000564247 ADRB2P07550 413 aa18.36■□□□□ 0.53
CMTM3-208ENST00000564247 ITGA4P13612 1032 aa18.36■□□□□ 0.53
CMTM3-208ENST00000564247 TNFSF9P41273 254 aa18.36■□□□□ 0.53
CMTM3-208ENST00000564247 FAM189BP81408 668 aa18.36■□□□□ 0.53
CMTM3-208ENST00000564247 BTG3Q14201 252 aaPredicted RBP18.36■□□□□ 0.53
CMTM3-208ENST00000564247 FNDC1Q4ZHG4 1894 aaPredicted RBP18.36■□□□□ 0.53
CMTM3-208ENST00000564247 ZBTB41Q5SVQ8 909 aa18.36■□□□□ 0.53
CMTM3-208ENST00000564247 SARM1Q6SZW1 724 aa18.36■□□□□ 0.53
CMTM3-208ENST00000564247 MRPL10Q7Z7H8 261 aaKnown RBP18.36■□□□□ 0.53
CMTM3-208ENST00000564247 CMTR2Q8IYT2 770 aaKnown RBP18.36■□□□□ 0.53
CMTM3-208ENST00000564247 CEP120Q8N960 986 aa18.36■□□□□ 0.53
CMTM3-208ENST00000564247 PARD3BQ8TEW8 1205 aa18.36■□□□□ 0.53
CMTM3-208ENST00000564247 CLP1Q92989 425 aaKnown RBP18.36■□□□□ 0.53
CMTM3-208ENST00000564247 APOL6Q9BWW8 343 aa18.36■□□□□ 0.53
CMTM3-208ENST00000564247 PLEKHA5Q9HAU0 1116 aa18.36■□□□□ 0.53
CMTM3-208ENST00000564247 IFNKQ9P0W0 207 aa18.36■□□□□ 0.53
CMTM3-208ENST00000564247 PARP2Q9UGN5 583 aa18.36■□□□□ 0.53
CMTM3-208ENST00000564247 LRFN2Q9ULH4 789 aa18.36■□□□□ 0.53
CMTM3-208ENST00000564247 RWDD3Q9Y3V2 267 aa18.36■□□□□ 0.53
CMTM3-208ENST00000564247 IPPQ9Y573 584 aa18.36■□□□□ 0.53
CMTM3-208ENST00000564247 PCDHB7Q9Y5E2 793 aa18.36■□□□□ 0.53
CMTM3-208ENST00000564247 XIRP2A4UGR9 3374 aa18.36■□□□□ 0.53
CMTM3-208ENST00000564247 VCANP13611 3396 aa18.36■□□□□ 0.53
CMTM3-208ENST00000564247 A0A0U1RQF3 1178 aa18.35■□□□□ 0.53
CMTM3-208ENST00000564247 AFPP02771 609 aaKnown RBP18.35■□□□□ 0.53
CMTM3-208ENST00000564247 LINC00271P0C7V0 271 aa18.35■□□□□ 0.53
CMTM3-208ENST00000564247 DLATP10515 647 aaKnown RBP18.35■□□□□ 0.53
CMTM3-208ENST00000564247 TNNI1P19237 187 aa18.35■□□□□ 0.53
CMTM3-208ENST00000564247 KCNH2Q12809 1159 aa18.35■□□□□ 0.53
CMTM3-208ENST00000564247 ENOX2Q16206 610 aaKnown RBP18.35■□□□□ 0.53
CMTM3-208ENST00000564247 FKBP15Q5T1M5 1219 aa18.35■□□□□ 0.53
CMTM3-208ENST00000564247 MICALL1Q8N3F8 863 aa18.35■□□□□ 0.53
CMTM3-208ENST00000564247 SMG8Q8ND04 991 aaKnown RBP18.35■□□□□ 0.53
CMTM3-208ENST00000564247 NDST4Q9H3R1 872 aa18.35■□□□□ 0.53
CMTM3-208ENST00000564247 ASB7Q9H672 318 aa18.35■□□□□ 0.53
CMTM3-208ENST00000564247 ELAC1Q9H777 363 aaKnown RBP18.35■□□□□ 0.53
CMTM3-208ENST00000564247 UBN1Q9NPG3 1134 aa18.35■□□□□ 0.53
CMTM3-208ENST00000564247 C5orf67F2Z3F1 127 aa18.34■□□□□ 0.53
CMTM3-208ENST00000564247 H3BNC9 293 aa18.34■□□□□ 0.53
CMTM3-208ENST00000564247 EOMESO95936 686 aa18.34■□□□□ 0.53
CMTM3-208ENST00000564247 RB1P06400 928 aa18.34■□□□□ 0.53
CMTM3-208ENST00000564247 CXCL8P10145 99 aa18.34■□□□□ 0.53
CMTM3-208ENST00000564247 GTF2H1P32780 548 aa18.34■□□□□ 0.53
CMTM3-208ENST00000564247 AP3M2P53677 418 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms