RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 GPR182O15218 404 aa23.68■■□□□ 1.38
LINC01960-201ENST00000563759 HSPA1AP0DMV8 641 aaKnown RBP23.68■■□□□ 1.38
LINC01960-201ENST00000563759 HSPA1BP0DMV9 641 aaKnown RBP23.68■■□□□ 1.38
LINC01960-201ENST00000563759 GHRP10912 638 aa23.68■■□□□ 1.38
LINC01960-201ENST00000563759 CTCFP49711 727 aaPredicted RBP23.68■■□□□ 1.38
LINC01960-201ENST00000563759 YARSP54577 528 aaKnown RBP23.68■■□□□ 1.38
LINC01960-201ENST00000563759 JAM2P57087 298 aa23.68■■□□□ 1.38
LINC01960-201ENST00000563759 CDK17Q00537 523 aa23.68■■□□□ 1.38
LINC01960-201ENST00000563759 ASIC2Q16515 512 aa23.68■■□□□ 1.38
LINC01960-201ENST00000563759 SLC10A6Q3KNW5 377 aa23.68■■□□□ 1.38
LINC01960-201ENST00000563759 TDRD12Q587J7 1177 aaKnown RBP23.68■■□□□ 1.38
LINC01960-201ENST00000563759 WDR44Q5JSH3 913 aa23.68■■□□□ 1.38
LINC01960-201ENST00000563759 FBXO47Q5MNV8 452 aa23.68■■□□□ 1.38
LINC01960-201ENST00000563759 RAD9BQ6WBX8 426 aa23.68■■□□□ 1.38
LINC01960-201ENST00000563759 PI4K2AQ9BTU6 479 aa23.68■■□□□ 1.38
LINC01960-201ENST00000563759 STK33Q9BYT3 514 aa23.68■■□□□ 1.38
LINC01960-201ENST00000563759 SNTG2Q9NY99 539 aa23.68■■□□□ 1.38
LINC01960-201ENST00000563759 HES2Q9Y543 173 aa23.68■■□□□ 1.38
LINC01960-201ENST00000563759 F8VZ95 297 aa23.68■■□□□ 1.38
LINC01960-201ENST00000563759 ZC3H11AO75152 810 aaKnown RBP eCLIP23.68■■□□□ 1.38
LINC01960-201ENST00000563759 VNN1O95497 513 aa23.68■■□□□ 1.38
LINC01960-201ENST00000563759 NFICP08651 508 aa23.68■■□□□ 1.38
LINC01960-201ENST00000563759 PAK2Q13177 524 aa23.68■■□□□ 1.38
LINC01960-201ENST00000563759 NCOA4Q13772 614 aa23.68■■□□□ 1.38
LINC01960-201ENST00000563759 ARHGAP44Q17R89 818 aa23.68■■□□□ 1.38
LINC01960-201ENST00000563759 ZNF618Q5T7W0 954 aa23.68■■□□□ 1.38
LINC01960-201ENST00000563759 JADE1Q6IE81 842 aa23.68■■□□□ 1.38
LINC01960-201ENST00000563759 TOGARAM2Q6ZUX3 1019 aa23.68■■□□□ 1.38
LINC01960-201ENST00000563759 APOL6Q9BWW8 343 aa23.68■■□□□ 1.38
LINC01960-201ENST00000563759 IMPG2Q9BZV3 1241 aa23.68■■□□□ 1.38
LINC01960-201ENST00000563759 TFRCP02786 760 aaKnown RBP23.67■■□□□ 1.38
LINC01960-201ENST00000563759 CKBP12277 381 aa23.67■■□□□ 1.38
LINC01960-201ENST00000563759 STAT1P42224 750 aa23.67■■□□□ 1.38
LINC01960-201ENST00000563759 DRAP1Q14919 205 aaPredicted RBP23.67■■□□□ 1.38
LINC01960-201ENST00000563759 FAM26DQ5JW98 314 aa23.67■■□□□ 1.38
LINC01960-201ENST00000563759 TRAPPC11Q7Z392 1133 aa23.67■■□□□ 1.38
LINC01960-201ENST00000563759 U2AF1L4Q8WU68 220 aaKnown RBP23.67■■□□□ 1.38
LINC01960-201ENST00000563759 NHEJ1Q9H9Q4 299 aaPredicted RBP23.67■■□□□ 1.38
LINC01960-201ENST00000563759 AIPL1Q9NZN9 384 aa23.67■■□□□ 1.38
LINC01960-201ENST00000563759 RBAK-RBAKDNI3L0D1 243 aa23.66■■□□□ 1.38
LINC01960-201ENST00000563759 MEFVO15553 781 aaPredicted RBP23.66■■□□□ 1.38
LINC01960-201ENST00000563759 UBXN11Q5T124 520 aa23.66■■□□□ 1.38
LINC01960-201ENST00000563759 FMNL3Q8IVF7 1028 aa23.66■■□□□ 1.38
LINC01960-201ENST00000563759 CD302Q8IX05 232 aa23.66■■□□□ 1.38
LINC01960-201ENST00000563759 DESI2Q9BSY9 194 aa23.66■■□□□ 1.38
LINC01960-201ENST00000563759 DEF6Q9H4E7 631 aa23.66■■□□□ 1.38
LINC01960-201ENST00000563759 KIAA0100Q14667 2235 aaKnown RBP23.66■■□□□ 1.38
LINC01960-201ENST00000563759 ZNF500O60304 480 aaPredicted RBP23.66■■□□□ 1.38
LINC01960-201ENST00000563759 SGPL1O95470 568 aa23.66■■□□□ 1.38
LINC01960-201ENST00000563759 SERPING1P05155 500 aa23.66■■□□□ 1.38
LINC01960-201ENST00000563759 PNMA6AP0CW24 399 aaPredicted RBP23.66■■□□□ 1.38
LINC01960-201ENST00000563759 CD52P31358 61 aa23.66■■□□□ 1.38
LINC01960-201ENST00000563759 CDK7P50613 346 aa23.66■■□□□ 1.38
LINC01960-201ENST00000563759 MFAP3P55082 362 aa23.66■■□□□ 1.38
LINC01960-201ENST00000563759 TMEM132DQ14C87 1099 aa23.66■■□□□ 1.38
LINC01960-201ENST00000563759 FAM126BQ8IXS8 530 aa23.66■■□□□ 1.38
LINC01960-201ENST00000563759 ARMC5Q96C12 935 aa23.66■■□□□ 1.38
LINC01960-201ENST00000563759 CCDC42Q96M95 316 aa23.66■■□□□ 1.38
LINC01960-201ENST00000563759 AGO3Q9H9G7 860 aaKnown RBP23.66■■□□□ 1.38
LINC01960-201ENST00000563759 CHST12Q9NRB3 414 aa23.66■■□□□ 1.38
LINC01960-201ENST00000563759 ARHGAP20Q9P2F6 1191 aa23.66■■□□□ 1.38
LINC01960-201ENST00000563759 TANC1Q9C0D5 1861 aa23.65■■□□□ 1.38
LINC01960-201ENST00000563759 RECQL4O94761 1208 aa23.65■■□□□ 1.38
LINC01960-201ENST00000563759 PLEKP08567 350 aaPredicted RBP23.65■■□□□ 1.38
LINC01960-201ENST00000563759 CYLC1P35663 651 aaPredicted RBP23.65■■□□□ 1.38
LINC01960-201ENST00000563759 SOX5P35711 763 aa23.65■■□□□ 1.38
LINC01960-201ENST00000563759 KLHL30Q0D2K2 578 aa23.65■■□□□ 1.38
LINC01960-201ENST00000563759 TRPC3Q13507 836 aa23.65■■□□□ 1.38
LINC01960-201ENST00000563759 LPIN1Q14693 890 aa23.65■■□□□ 1.38
LINC01960-201ENST00000563759 CCAR2Q8N163 923 aaKnown RBP23.65■■□□□ 1.38
LINC01960-201ENST00000563759 CAGE1Q8TC20 777 aa23.65■■□□□ 1.38
LINC01960-201ENST00000563759 ELMO3Q96BJ8 720 aa23.65■■□□□ 1.38
LINC01960-201ENST00000563759 SNX27Q96L92 541 aa23.65■■□□□ 1.38
LINC01960-201ENST00000563759 CRISPLD2Q9H0B8 497 aa23.65■■□□□ 1.38
LINC01960-201ENST00000563759 PLEKHA5Q9HAU0 1116 aa23.65■■□□□ 1.38
LINC01960-201ENST00000563759 TRMT1Q9NXH9 659 aaKnown RBP23.65■■□□□ 1.38
LINC01960-201ENST00000563759 PADI3Q9ULW8 664 aa23.65■■□□□ 1.38
LINC01960-201ENST00000563759 IPPQ9Y573 584 aa23.65■■□□□ 1.38
LINC01960-201ENST00000563759 CCP110O43303 1012 aa23.64■■□□□ 1.38
LINC01960-201ENST00000563759 CCDC175P0C221 793 aa23.64■■□□□ 1.38
LINC01960-201ENST00000563759 ZSCAN20P17040 1043 aaPredicted RBP23.64■■□□□ 1.38
LINC01960-201ENST00000563759 NOP14P78316 857 aaKnown RBP23.64■■□□□ 1.38
LINC01960-201ENST00000563759 CCDC170Q8IYT3 715 aa23.64■■□□□ 1.38
LINC01960-201ENST00000563759 USP38Q8NB14 1042 aa23.64■■□□□ 1.38
LINC01960-201ENST00000563759 KIF12Q96FN5 646 aa23.64■■□□□ 1.38
LINC01960-201ENST00000563759 GPR88Q9GZN0 384 aa23.64■■□□□ 1.38
LINC01960-201ENST00000563759 ERVK-5Q9HDB9 667 aa23.64■■□□□ 1.38
LINC01960-201ENST00000563759 C2CD2Q9Y426 696 aa23.64■■□□□ 1.38
LINC01960-201ENST00000563759 GFPT2O94808 682 aa23.64■■□□□ 1.37
LINC01960-201ENST00000563759 NDUFA10O95299 355 aa23.64■■□□□ 1.37
LINC01960-201ENST00000563759 IPO7O95373 1038 aaKnown RBP23.64■■□□□ 1.37
LINC01960-201ENST00000563759 FERP16591 822 aa23.64■■□□□ 1.37
LINC01960-201ENST00000563759 AKAP5P24588 427 aa23.64■■□□□ 1.37
LINC01960-201ENST00000563759 HGSNATQ68CP4 663 aa23.64■■□□□ 1.37
LINC01960-201ENST00000563759 NT5DC4Q86YG4 428 aa23.64■■□□□ 1.37
LINC01960-201ENST00000563759 HELQQ8TDG4 1101 aa23.64■■□□□ 1.37
LINC01960-201ENST00000563759 KAT5Q92993 513 aa23.64■■□□□ 1.37
LINC01960-201ENST00000563759 FAM81BQ96LP2 452 aa23.64■■□□□ 1.37
LINC01960-201ENST00000563759 PARP2Q9UGN5 583 aa23.64■■□□□ 1.37
LINC01960-201ENST00000563759 PPP2R2CQ9Y2T4 447 aa23.64■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms