RNA–Protein interactions for RNA: ENST00000563672.5

CMTM3-206, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 460 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-206ENST00000563672 CLEC1BQ9P126 229 aa22.12■■□□□ 1.13
CMTM3-206ENST00000563672 CPSF3Q9UKF6 684 aaKnown RBP22.12■■□□□ 1.13
CMTM3-206ENST00000563672 CIZ1Q9ULV3 898 aaPredicted RBP22.12■■□□□ 1.13
CMTM3-206ENST00000563672 PVALEFA0A1B0GWK0 134 aa22.11■■□□□ 1.13
CMTM3-206ENST00000563672 TMEM189-UBE2V1I3L0A0 370 aa22.11■■□□□ 1.13
CMTM3-206ENST00000563672 CLASP2O75122 1294 aaKnown RBP22.11■■□□□ 1.13
CMTM3-206ENST00000563672 KIF4AO95239 1232 aa22.11■■□□□ 1.13
CMTM3-206ENST00000563672 SYKP43405 635 aa22.11■■□□□ 1.13
CMTM3-206ENST00000563672 RBM10P98175 930 aaKnown RBP22.11■■□□□ 1.13
CMTM3-206ENST00000563672 POSTNQ15063 836 aa22.11■■□□□ 1.13
CMTM3-206ENST00000563672 ENOX2Q16206 610 aaKnown RBP22.11■■□□□ 1.13
CMTM3-206ENST00000563672 UPP1Q16831 310 aa22.11■■□□□ 1.13
CMTM3-206ENST00000563672 KIAA0319Q5VV43 1072 aa22.11■■□□□ 1.13
CMTM3-206ENST00000563672 DCLRE1AQ6PJP8 1040 aa22.11■■□□□ 1.13
CMTM3-206ENST00000563672 FSIP1Q8NA03 581 aa22.11■■□□□ 1.13
CMTM3-206ENST00000563672 MSLNLQ96KJ4 702 aa22.11■■□□□ 1.13
CMTM3-206ENST00000563672 GOLPH3LQ9H4A5 285 aa22.11■■□□□ 1.13
CMTM3-206ENST00000563672 GOLGA2P5Q9HBQ8 144 aa22.11■■□□□ 1.13
CMTM3-206ENST00000563672 TCHHQ07283 1943 aa22.11■■□□□ 1.13
CMTM3-206ENST00000563672 PRPF6O94906 941 aaKnown RBP22.1■■□□□ 1.13
CMTM3-206ENST00000563672 NDUFV1P49821 464 aa22.1■■□□□ 1.13
CMTM3-206ENST00000563672 CLCNKBP51801 687 aa22.1■■□□□ 1.13
CMTM3-206ENST00000563672 DSG1Q02413 1049 aa22.1■■□□□ 1.13
CMTM3-206ENST00000563672 FAM26FQ5R3K3 315 aa22.1■■□□□ 1.13
CMTM3-206ENST00000563672 CD300LGQ6UXG3 332 aa22.1■■□□□ 1.13
CMTM3-206ENST00000563672 EPM2AIP1Q7L775 607 aaPredicted RBP22.1■■□□□ 1.13
CMTM3-206ENST00000563672 GPR65Q8IYL9 337 aa22.1■■□□□ 1.13
CMTM3-206ENST00000563672 DDX27Q96GQ7 796 aaKnown RBP22.1■■□□□ 1.13
CMTM3-206ENST00000563672 TMEM206Q9H813 350 aa22.1■■□□□ 1.13
CMTM3-206ENST00000563672 RPF1Q9H9Y2 349 aaKnown RBP22.1■■□□□ 1.13
CMTM3-206ENST00000563672 MRPL17Q9NRX2 175 aaKnown RBP22.1■■□□□ 1.13
CMTM3-206ENST00000563672 AGO2Q9UKV8 859 aaKnown RBP22.1■■□□□ 1.13
CMTM3-206ENST00000563672 SSX2IPQ9Y2D8 614 aa22.1■■□□□ 1.13
CMTM3-206ENST00000563672 CUL9Q8IWT3 2517 aa22.1■■□□□ 1.13
CMTM3-206ENST00000563672 SF3B1O75533 1304 aaKnown RBP eCLIP22.09■■□□□ 1.13
CMTM3-206ENST00000563672 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.09■■□□□ 1.13
CMTM3-206ENST00000563672 LACTBL1A8MY62 500 aa22.09■■□□□ 1.13
CMTM3-206ENST00000563672 B3GAT3O94766 335 aa22.09■■□□□ 1.13
CMTM3-206ENST00000563672 URODP06132 367 aa22.09■■□□□ 1.13
CMTM3-206ENST00000563672 IGFBP6P24592 240 aaPredicted RBP22.09■■□□□ 1.13
CMTM3-206ENST00000563672 CA8P35219 290 aa22.09■■□□□ 1.13
CMTM3-206ENST00000563672 HOXD13P35453 343 aa22.09■■□□□ 1.13
CMTM3-206ENST00000563672 GLUD2P49448 558 aa22.09■■□□□ 1.13
CMTM3-206ENST00000563672 ZBTB6Q15916 424 aa22.09■■□□□ 1.13
CMTM3-206ENST00000563672 USP41Q3LFD5 358 aa22.09■■□□□ 1.13
CMTM3-206ENST00000563672 PUS10Q3MIT2 529 aaKnown RBP22.09■■□□□ 1.13
CMTM3-206ENST00000563672 STXBP4Q6ZWJ1 553 aa22.09■■□□□ 1.13
CMTM3-206ENST00000563672 ZNF507Q8TCN5 953 aa22.09■■□□□ 1.13
CMTM3-206ENST00000563672 HASPINQ8TF76 798 aa22.09■■□□□ 1.13
CMTM3-206ENST00000563672 POMGNT1Q8WZA1 660 aa22.09■■□□□ 1.13
CMTM3-206ENST00000563672 C18orf25Q96B23 403 aaPredicted RBP22.09■■□□□ 1.13
CMTM3-206ENST00000563672 KLHL5Q96PQ7 755 aa22.09■■□□□ 1.13
CMTM3-206ENST00000563672 TSPAN18Q96SJ8 248 aa22.09■■□□□ 1.13
CMTM3-206ENST00000563672 COL25A1Q9BXS0 654 aaPredicted RBP22.09■■□□□ 1.13
CMTM3-206ENST00000563672 BARX2Q9UMQ3 279 aaPredicted RBP22.09■■□□□ 1.13
CMTM3-206ENST00000563672 GRXCR2A6NFK2 248 aa22.08■■□□□ 1.13
CMTM3-206ENST00000563672 EIF3DO15371 548 aaKnown RBP eCLIP22.08■■□□□ 1.13
CMTM3-206ENST00000563672 KLRC4O43908 158 aa22.08■■□□□ 1.13
CMTM3-206ENST00000563672 MYL1P05976 194 aa22.08■■□□□ 1.13
CMTM3-206ENST00000563672 CNPP09543 421 aaKnown RBP22.08■■□□□ 1.13
CMTM3-206ENST00000563672 GARTP22102 1010 aa22.08■■□□□ 1.13
CMTM3-206ENST00000563672 ACOT2P49753 483 aa22.08■■□□□ 1.13
CMTM3-206ENST00000563672 POU5F1Q01860 360 aaKnown RBP22.08■■□□□ 1.13
CMTM3-206ENST00000563672 PPP2R3AQ06190 1150 aa22.08■■□□□ 1.13
CMTM3-206ENST00000563672 PTCRAQ6ISU1 281 aaPredicted RBP22.08■■□□□ 1.13
CMTM3-206ENST00000563672 CRELD2Q6UXH1 353 aaPredicted RBP22.08■■□□□ 1.13
CMTM3-206ENST00000563672 CD302Q8IX05 232 aa22.08■■□□□ 1.13
CMTM3-206ENST00000563672 SYCP3Q8IZU3 236 aa22.08■■□□□ 1.13
CMTM3-206ENST00000563672 SLC22A17Q8WUG5 538 aa22.08■■□□□ 1.13
CMTM3-206ENST00000563672 B3GALT6Q96L58 329 aa22.08■■□□□ 1.13
CMTM3-206ENST00000563672 EMILIN2Q9BXX0 1053 aa22.08■■□□□ 1.13
CMTM3-206ENST00000563672 RXFP1Q9HBX9 757 aa22.08■■□□□ 1.13
CMTM3-206ENST00000563672 CD207Q9UJ71 328 aa22.08■■□□□ 1.13
CMTM3-206ENST00000563672 HCFC2Q9Y5Z7 792 aa22.08■■□□□ 1.13
CMTM3-206ENST00000563672 C2CD2LO14523 706 aa22.07■■□□□ 1.12
CMTM3-206ENST00000563672 RPL9P32969 192 aaKnown RBP22.07■■□□□ 1.12
CMTM3-206ENST00000563672 SPAG1Q07617 926 aa22.07■■□□□ 1.12
CMTM3-206ENST00000563672 TPRNQ4KMQ1 711 aa22.07■■□□□ 1.12
CMTM3-206ENST00000563672 KIAA1841Q6NSI8 718 aa22.07■■□□□ 1.12
CMTM3-206ENST00000563672 LLGL2Q6P1M3 1020 aa22.07■■□□□ 1.12
CMTM3-206ENST00000563672 TMEM87AQ8NBN3 555 aa22.07■■□□□ 1.12
CMTM3-206ENST00000563672 C3orf58Q8NDZ4 430 aa22.07■■□□□ 1.12
CMTM3-206ENST00000563672 KIF12Q96FN5 646 aa22.07■■□□□ 1.12
CMTM3-206ENST00000563672 TRIP11Q15643 1979 aa22.07■■□□□ 1.12
CMTM3-206ENST00000563672 PODXLO00592 558 aa22.06■■□□□ 1.12
CMTM3-206ENST00000563672 ZNF202O95125 648 aa22.06■■□□□ 1.12
CMTM3-206ENST00000563672 SRGAP2BP0DMP2 458 aa22.06■■□□□ 1.12
CMTM3-206ENST00000563672 CYP3A5P20815 502 aa22.06■■□□□ 1.12
CMTM3-206ENST00000563672 ANP32AP39687 249 aaKnown RBP22.06■■□□□ 1.12
CMTM3-206ENST00000563672 ELAVL2Q12926 359 aaKnown RBP22.06■■□□□ 1.12
CMTM3-206ENST00000563672 CLUL1Q15846 466 aa22.06■■□□□ 1.12
CMTM3-206ENST00000563672 RTP2Q5QGT7 225 aa22.06■■□□□ 1.12
CMTM3-206ENST00000563672 FAM171A1Q5VUB5 890 aa22.06■■□□□ 1.12
CMTM3-206ENST00000563672 KRBA2Q6ZNG9 492 aa22.06■■□□□ 1.12
CMTM3-206ENST00000563672 SMRP1Q8NCR6 262 aa22.06■■□□□ 1.12
CMTM3-206ENST00000563672 ADAMTS19Q8TE59 1207 aa22.06■■□□□ 1.12
CMTM3-206ENST00000563672 SCFD1Q8WVM8 642 aa22.06■■□□□ 1.12
CMTM3-206ENST00000563672 ASB7Q9H672 318 aa22.06■■□□□ 1.12
CMTM3-206ENST00000563672 TUBGCP4Q9UGJ1 667 aa22.06■■□□□ 1.12
CMTM3-206ENST00000563672 GTF3C5Q9Y5Q8 519 aaPredicted RBP22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms