RNA–Protein interactions for RNA: ENST00000563590.2

CCDC187-201, Transcript of coiled-coil domain containing 187, humanhuman

TSL 1 (best)

Gene CCDC187, Length 3,543 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187-201ENST00000563590 JAM2P57087 298 aa13.53□□□□□ -0.24
CCDC187-201ENST00000563590 C2CD6Q53TS8 623 aa13.53□□□□□ -0.24
CCDC187-201ENST00000563590 RFWD3Q6PCD5 774 aa13.53□□□□□ -0.24
CCDC187-201ENST00000563590 ZC3H3Q8IXZ2 948 aaKnown RBP13.53□□□□□ -0.24
CCDC187-201ENST00000563590 PPM1KQ8N3J5 372 aa13.53□□□□□ -0.24
CCDC187-201ENST00000563590 SLC20A1Q8WUM9 679 aa13.53□□□□□ -0.24
CCDC187-201ENST00000563590 ZNF653Q96CK0 615 aa13.53□□□□□ -0.24
CCDC187-201ENST00000563590 CARD9Q9H257 536 aa13.53□□□□□ -0.24
CCDC187-201ENST00000563590 ACP6Q9NPH0 428 aa13.53□□□□□ -0.24
CCDC187-201ENST00000563590 MYH14Q7Z406 1995 aaKnown RBP13.53□□□□□ -0.24
CCDC187-201ENST00000563590 ARHGAP42A6NI28 874 aa13.53□□□□□ -0.24
CCDC187-201ENST00000563590 TPBGLP0DKB5 382 aa13.53□□□□□ -0.24
CCDC187-201ENST00000563590 PYGMP11217 842 aa13.53□□□□□ -0.24
CCDC187-201ENST00000563590 VHLP40337 213 aa13.53□□□□□ -0.24
CCDC187-201ENST00000563590 NPEPPSP55786 919 aa13.53□□□□□ -0.24
CCDC187-201ENST00000563590 THOC5Q13769 683 aaKnown RBP13.53□□□□□ -0.24
CCDC187-201ENST00000563590 KPNB1Q14974 876 aaKnown RBP13.53□□□□□ -0.24
CCDC187-201ENST00000563590 TTC27Q6P3X3 843 aa13.53□□□□□ -0.24
CCDC187-201ENST00000563590 PPP4R3CPQ6ZMV5 832 aa13.53□□□□□ -0.24
CCDC187-201ENST00000563590 MKNK1Q9BUB5 465 aa13.53□□□□□ -0.24
CCDC187-201ENST00000563590 SAYSD1Q9NPB0 183 aa13.53□□□□□ -0.24
CCDC187-201ENST00000563590 NAALADL1Q9UQQ1 740 aa13.53□□□□□ -0.24
CCDC187-201ENST00000563590 ALADP13716 330 aa13.53□□□□□ -0.24
CCDC187-201ENST00000563590 POLD1P28340 1107 aa13.53□□□□□ -0.24
CCDC187-201ENST00000563590 HOXD13P35453 343 aa13.53□□□□□ -0.24
CCDC187-201ENST00000563590 SOX5P35711 763 aa13.53□□□□□ -0.24
CCDC187-201ENST00000563590 SPARCL1Q14515 664 aa13.53□□□□□ -0.24
CCDC187-201ENST00000563590 KNOP1Q1ED39 458 aaKnown RBP13.53□□□□□ -0.24
CCDC187-201ENST00000563590 CYP4X1Q8N118 509 aa13.53□□□□□ -0.24
CCDC187-201ENST00000563590 NEDD1Q8NHV4 660 aa13.53□□□□□ -0.24
CCDC187-201ENST00000563590 CKAP2Q8WWK9 683 aa13.53□□□□□ -0.24
CCDC187-201ENST00000563590 HAUS1Q96CS2 278 aa13.53□□□□□ -0.24
CCDC187-201ENST00000563590 VCX3BQ9H321 246 aa13.53□□□□□ -0.24
CCDC187-201ENST00000563590 CCDC134Q9H6E4 229 aa13.53□□□□□ -0.24
CCDC187-201ENST00000563590 RIOX1Q9H6W3 641 aa13.53□□□□□ -0.24
CCDC187-201ENST00000563590 VCX3AQ9NNX9 186 aa13.53□□□□□ -0.24
CCDC187-201ENST00000563590 USP20Q9Y2K6 914 aa13.53□□□□□ -0.24
CCDC187-201ENST00000563590 ROBO3Q96MS0 1386 aa13.53□□□□□ -0.24
CCDC187-201ENST00000563590 KDM3AQ9Y4C1 1321 aa13.53□□□□□ -0.24
CCDC187-201ENST00000563590 PEX11AO75192 247 aa13.52□□□□□ -0.24
CCDC187-201ENST00000563590 MED24O75448 989 aa13.52□□□□□ -0.24
CCDC187-201ENST00000563590 KRT5P13647 590 aa13.52□□□□□ -0.24
CCDC187-201ENST00000563590 PLS3P13797 630 aa13.52□□□□□ -0.24
CCDC187-201ENST00000563590 NMT1P30419 496 aaKnown RBP13.52□□□□□ -0.24
CCDC187-201ENST00000563590 GSTT1P30711 240 aa13.52□□□□□ -0.24
CCDC187-201ENST00000563590 PIK3CAP42336 1068 aa13.52□□□□□ -0.24
CCDC187-201ENST00000563590 PPATQ06203 517 aa13.52□□□□□ -0.24
CCDC187-201ENST00000563590 MPP2Q14168 576 aa13.52□□□□□ -0.24
CCDC187-201ENST00000563590 KHDC1Q4VXA5 237 aaKnown RBP13.52□□□□□ -0.24
CCDC187-201ENST00000563590 OGFOD1Q8N543 542 aa13.52□□□□□ -0.24
CCDC187-201ENST00000563590 SLC25A41Q8N5S1 370 aa13.52□□□□□ -0.24
CCDC187-201ENST00000563590 ZNF513Q8N8E2 541 aaPredicted RBP13.52□□□□□ -0.24
CCDC187-201ENST00000563590 SLC30A5Q8TAD4 765 aa13.52□□□□□ -0.24
CCDC187-201ENST00000563590 SLC35C1Q96A29 364 aa13.52□□□□□ -0.24
CCDC187-201ENST00000563590 PLVAPQ9BX97 442 aa13.52□□□□□ -0.24
CCDC187-201ENST00000563590 DHX36Q9H2U1 1008 aaKnown RBP13.52□□□□□ -0.24
CCDC187-201ENST00000563590 ZBED4O75132 1171 aa13.52□□□□□ -0.25
CCDC187-201ENST00000563590 COILP38432 576 aaPredicted RBP13.52□□□□□ -0.25
CCDC187-201ENST00000563590 POLGP54098 1239 aaPredicted RBP13.52□□□□□ -0.25
CCDC187-201ENST00000563590 RBBP8NLQ8NC74 664 aaPredicted RBP13.52□□□□□ -0.25
CCDC187-201ENST00000563590 NMD3Q96D46 503 aaKnown RBP13.52□□□□□ -0.25
CCDC187-201ENST00000563590 DDX27Q96GQ7 796 aaKnown RBP13.52□□□□□ -0.25
CCDC187-201ENST00000563590 MOV10L1Q9BXT6 1211 aaKnown RBP13.52□□□□□ -0.25
CCDC187-201ENST00000563590 SCN7AQ01118 1682 aa13.52□□□□□ -0.25
CCDC187-201ENST00000563590 SNED1Q8TER0 1413 aa13.52□□□□□ -0.25
CCDC187-201ENST00000563590 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.52□□□□□ -0.25
CCDC187-201ENST00000563590 FAM47DPA6NHR8 397 aa13.52□□□□□ -0.25
CCDC187-201ENST00000563590 PTGIRP43119 386 aa13.52□□□□□ -0.25
CCDC187-201ENST00000563590 RRP1BQ14684 758 aaKnown RBP13.52□□□□□ -0.25
CCDC187-201ENST00000563590 R3HDM1Q15032 1099 aaKnown RBP13.52□□□□□ -0.25
CCDC187-201ENST00000563590 GALNTL6Q49A17 601 aa13.52□□□□□ -0.25
CCDC187-201ENST00000563590 PHLDB3Q6NSJ2 640 aa13.52□□□□□ -0.25
CCDC187-201ENST00000563590 TRIM74Q86UV6 250 aa13.52□□□□□ -0.25
CCDC187-201ENST00000563590 TRIM73Q86UV7 250 aa13.52□□□□□ -0.25
CCDC187-201ENST00000563590 SP8Q8IXZ3 490 aa13.52□□□□□ -0.25
CCDC187-201ENST00000563590 OLIG1Q8TAK6 271 aa13.52□□□□□ -0.25
CCDC187-201ENST00000563590 MAML1Q92585 1016 aa13.52□□□□□ -0.25
CCDC187-201ENST00000563590 MTMR4Q9NYA4 1195 aa13.52□□□□□ -0.25
CCDC187-201ENST00000563590 COG5Q9UP83 839 aa13.52□□□□□ -0.25
CCDC187-201ENST00000563590 O00370 1275 aa13.51□□□□□ -0.25
CCDC187-201ENST00000563590 RNF8O76064 485 aa13.51□□□□□ -0.25
CCDC187-201ENST00000563590 OAS1P00973 400 aaKnown RBP13.51□□□□□ -0.25
CCDC187-201ENST00000563590 TMEM253P0C7T8 217 aa13.51□□□□□ -0.25
CCDC187-201ENST00000563590 ALAS1P13196 640 aa13.51□□□□□ -0.25
CCDC187-201ENST00000563590 CETN1Q12798 172 aa13.51□□□□□ -0.25
CCDC187-201ENST00000563590 PPP1R18Q6NYC8 613 aa13.51□□□□□ -0.25
CCDC187-201ENST00000563590 CCDC125Q86Z20 511 aa13.51□□□□□ -0.25
CCDC187-201ENST00000563590 GALNT15Q8N3T1 639 aa13.51□□□□□ -0.25
CCDC187-201ENST00000563590 ZNF277Q9NRM2 450 aaPredicted RBP13.51□□□□□ -0.25
CCDC187-201ENST00000563590 FBXO28Q9NVF7 368 aa13.51□□□□□ -0.25
CCDC187-201ENST00000563590 FZD1Q9UP38 647 aa13.51□□□□□ -0.25
CCDC187-201ENST00000563590 GJA3Q9Y6H8 435 aa13.51□□□□□ -0.25
CCDC187-201ENST00000563590 HAUS5O94927 633 aa13.51□□□□□ -0.25
CCDC187-201ENST00000563590 VCAM1P19320 739 aa13.51□□□□□ -0.25
CCDC187-201ENST00000563590 FOXN2P32314 431 aa13.51□□□□□ -0.25
CCDC187-201ENST00000563590 MYL7Q01449 175 aa13.51□□□□□ -0.25
CCDC187-201ENST00000563590 DBN1Q16643 649 aa13.51□□□□□ -0.25
CCDC187-201ENST00000563590 NLRP9Q7RTR0 991 aa13.51□□□□□ -0.25
CCDC187-201ENST00000563590 ZDHHC14Q8IZN3 488 aa13.51□□□□□ -0.25
CCDC187-201ENST00000563590 ERMNQ8TAM6 284 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms