RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 APBB1IPQ7Z5R6 666 aaPredicted RBP20.56■□□□□ 0.88
NME3-204ENST00000563498 LTB4R2Q9NPC1 389 aa20.56■□□□□ 0.88
NME3-204ENST00000563498 AVENQ9NQS1 362 aaPredicted RBP20.56■□□□□ 0.88
NME3-204ENST00000563498 SPATA6Q9NWH7 488 aaPredicted RBP20.56■□□□□ 0.88
NME3-204ENST00000563498 HCFC1R1Q9NWW0 138 aa20.56■□□□□ 0.88
NME3-204ENST00000563498 GDE1Q9NZC3 331 aa20.56■□□□□ 0.88
NME3-204ENST00000563498 USP20Q9Y2K6 914 aa20.56■□□□□ 0.88
NME3-204ENST00000563498 GDAQ9Y2T3 454 aa20.56■□□□□ 0.88
NME3-204ENST00000563498 CDY1Q9Y6F8 540 aa20.56■□□□□ 0.88
NME3-204ENST00000563498 SPTLC1O15269 473 aa20.55■□□□□ 0.88
NME3-204ENST00000563498 LAMTOR5O43504 91 aa20.55■□□□□ 0.88
NME3-204ENST00000563498 ECI2O75521 394 aa20.55■□□□□ 0.88
NME3-204ENST00000563498 CLCNKBP51801 687 aa20.55■□□□□ 0.88
NME3-204ENST00000563498 UBXN2BQ14CS0 331 aa20.55■□□□□ 0.88
NME3-204ENST00000563498 CD300LGQ6UXG3 332 aa20.55■□□□□ 0.88
NME3-204ENST00000563498 DGLUCYQ7Z3D6 616 aa20.55■□□□□ 0.88
NME3-204ENST00000563498 IFT74Q96LB3 600 aa20.55■□□□□ 0.88
NME3-204ENST00000563498 NELL2Q99435 816 aa20.55■□□□□ 0.88
NME3-204ENST00000563498 KXD1Q9BQD3 176 aa20.55■□□□□ 0.88
NME3-204ENST00000563498 MRPS23Q9Y3D9 190 aaKnown RBP20.55■□□□□ 0.88
NME3-204ENST00000563498 MTF2Q9Y483 593 aaPredicted RBP20.55■□□□□ 0.88
NME3-204ENST00000563498 FRYLO94915 3013 aa20.55■□□□□ 0.88
NME3-204ENST00000563498 PATJQ8NI35 1801 aa20.55■□□□□ 0.88
NME3-204ENST00000563498 NOTCH4Q99466 2003 aa20.54■□□□□ 0.88
NME3-204ENST00000563498 FAM170BA6NMN3 283 aa20.54■□□□□ 0.88
NME3-204ENST00000563498 JAK2O60674 1132 aa20.54■□□□□ 0.88
NME3-204ENST00000563498 LIG1P18858 919 aa20.54■□□□□ 0.88
NME3-204ENST00000563498 SAFBQ15424 915 aaKnown RBP eCLIP20.54■□□□□ 0.88
NME3-204ENST00000563498 GLRA4Q5JXX5 417 aa20.54■□□□□ 0.88
NME3-204ENST00000563498 NT5DC1Q5TFE4 455 aa20.54■□□□□ 0.88
NME3-204ENST00000563498 ATF7IP2Q5U623 682 aa20.54■□□□□ 0.88
NME3-204ENST00000563498 ZNF461Q8TAF7 563 aa20.54■□□□□ 0.88
NME3-204ENST00000563498 KIFAP3Q92845 792 aa20.54■□□□□ 0.88
NME3-204ENST00000563498 DDX27Q96GQ7 796 aaKnown RBP20.54■□□□□ 0.88
NME3-204ENST00000563498 DLL3Q9NYJ7 618 aa20.54■□□□□ 0.88
NME3-204ENST00000563498 PCDHGA2Q9Y5H1 932 aa20.54■□□□□ 0.88
NME3-204ENST00000563498 COL4A3Q01955 1670 aa20.54■□□□□ 0.88
NME3-204ENST00000563498 OR52Z1P0C646 297 aa20.53■□□□□ 0.88
NME3-204ENST00000563498 IGFBP6P24592 240 aaPredicted RBP20.53■□□□□ 0.88
NME3-204ENST00000563498 TKTP29401 623 aaKnown RBP20.53■□□□□ 0.88
NME3-204ENST00000563498 FOSBP53539 338 aa20.53■□□□□ 0.88
NME3-204ENST00000563498 ZBTB41Q5SVQ8 909 aa20.53■□□□□ 0.88
NME3-204ENST00000563498 HAUS3Q68CZ6 603 aa20.53■□□□□ 0.88
NME3-204ENST00000563498 SLC8B1Q6J4K2 584 aa20.53■□□□□ 0.88
NME3-204ENST00000563498 CLDN23Q96B33 292 aa20.53■□□□□ 0.88
NME3-204ENST00000563498 KIFC3Q9BVG8 833 aa20.53■□□□□ 0.88
NME3-204ENST00000563498 TNFSF13BQ9Y275 285 aa20.53■□□□□ 0.88
NME3-204ENST00000563498 SMIM28A0A1B0GU29 152 aa20.52■□□□□ 0.88
NME3-204ENST00000563498 ARHGEF37A1IGU5 675 aa20.52■□□□□ 0.88
NME3-204ENST00000563498 NCAM2O15394 837 aa20.52■□□□□ 0.88
NME3-204ENST00000563498 RHOP08100 348 aa20.52■□□□□ 0.88
NME3-204ENST00000563498 RPS9P46781 194 aaKnown RBP20.52■□□□□ 0.88
NME3-204ENST00000563498 XKR4Q5GH76 650 aa20.52■□□□□ 0.88
NME3-204ENST00000563498 DCLK2Q8N568 766 aa20.52■□□□□ 0.88
NME3-204ENST00000563498 ZBTB44Q8NCP5 570 aa20.52■□□□□ 0.88
NME3-204ENST00000563498 C3orf58Q8NDZ4 430 aa20.52■□□□□ 0.88
NME3-204ENST00000563498 ING5Q8WYH8 240 aa20.52■□□□□ 0.88
NME3-204ENST00000563498 TOPORSQ9NS56 1045 aaPredicted RBP20.52■□□□□ 0.88
NME3-204ENST00000563498 DNAH14Q0VDD8 3507 aa20.52■□□□□ 0.88
NME3-204ENST00000563498 MED19A0JLT2 244 aaPredicted RBP20.51■□□□□ 0.87
NME3-204ENST00000563498 K7ERI5 159 aa20.51■□□□□ 0.87
NME3-204ENST00000563498 ABLIM3O94929 683 aa20.51■□□□□ 0.87
NME3-204ENST00000563498 PTPN2P17706 415 aa20.51■□□□□ 0.87
NME3-204ENST00000563498 GRM5P41594 1212 aa20.51■□□□□ 0.87
NME3-204ENST00000563498 YARSP54577 528 aaKnown RBP20.51■□□□□ 0.87
NME3-204ENST00000563498 ROR1Q01973 937 aa20.51■□□□□ 0.87
NME3-204ENST00000563498 SLC5A9Q2M3M2 681 aa20.51■□□□□ 0.87
NME3-204ENST00000563498 ALKAL1Q6UXT8 129 aa20.51■□□□□ 0.87
NME3-204ENST00000563498 TPRG1Q6ZUI0 275 aa20.51■□□□□ 0.87
NME3-204ENST00000563498 ATRIPQ8WXE1 791 aa20.51■□□□□ 0.87
NME3-204ENST00000563498 NELL1Q92832 810 aa20.51■□□□□ 0.87
NME3-204ENST00000563498 ELSPBP1Q96BH3 223 aa20.51■□□□□ 0.87
NME3-204ENST00000563498 MCRS1Q96EZ8 462 aa20.51■□□□□ 0.87
NME3-204ENST00000563498 GOLGA2P5Q9HBQ8 144 aa20.51■□□□□ 0.87
NME3-204ENST00000563498 SLC38A7Q9NVC3 462 aa20.51■□□□□ 0.87
NME3-204ENST00000563498 MRPS17Q9Y2R5 130 aaKnown RBP20.51■□□□□ 0.87
NME3-204ENST00000563498 I3L4J1 428 aa20.5■□□□□ 0.87
NME3-204ENST00000563498 MICAL2O94851 1124 aa20.5■□□□□ 0.87
NME3-204ENST00000563498 LRG1P02750 347 aa20.5■□□□□ 0.87
NME3-204ENST00000563498 CD72P21854 359 aa20.5■□□□□ 0.87
NME3-204ENST00000563498 TARSP26639 723 aaKnown RBP20.5■□□□□ 0.87
NME3-204ENST00000563498 BRCC3P46736 316 aa20.5■□□□□ 0.87
NME3-204ENST00000563498 CSTF1Q05048 431 aaKnown RBP20.5■□□□□ 0.87
NME3-204ENST00000563498 ZNF174Q15697 407 aa20.5■□□□□ 0.87
NME3-204ENST00000563498 VARS2Q5ST30 1063 aaKnown RBP20.5■□□□□ 0.87
NME3-204ENST00000563498 ZNF852Q6ZMS4 543 aa20.5■□□□□ 0.87
NME3-204ENST00000563498 GPR161Q8N6U8 529 aaKnown RBP20.5■□□□□ 0.87
NME3-204ENST00000563498 DNASE1L2Q92874 299 aa20.5■□□□□ 0.87
NME3-204ENST00000563498 CCDC94Q9BW85 323 aaPredicted RBP20.5■□□□□ 0.87
NME3-204ENST00000563498 BHMT2Q9H2M3 363 aa20.5■□□□□ 0.87
NME3-204ENST00000563498 FOXP1Q9H334 677 aaPredicted RBP20.5■□□□□ 0.87
NME3-204ENST00000563498 PTPRHQ9HD43 1115 aa20.5■□□□□ 0.87
NME3-204ENST00000563498 ZSCAN32Q9NX65 697 aa20.5■□□□□ 0.87
NME3-204ENST00000563498 PHLPP2Q6ZVD8 1323 aa20.5■□□□□ 0.87
NME3-204ENST00000563498 CEP250Q9BV73 2442 aa20.49■□□□□ 0.87
NME3-204ENST00000563498 SYN3O14994 580 aa20.49■□□□□ 0.87
NME3-204ENST00000563498 TBC1D4O60343 1298 aa20.49■□□□□ 0.87
NME3-204ENST00000563498 ATF2P15336 505 aa20.49■□□□□ 0.87
NME3-204ENST00000563498 ELF1P32519 619 aa20.49■□□□□ 0.87
NME3-204ENST00000563498 CCT6AP40227 531 aaKnown RBP20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms