RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 UIMC1Q96RL1 719 aa6.05□□□□□ -1.44
SMG1-206ENST00000562668 SOX7Q9BT81 388 aa6.05□□□□□ -1.44
SMG1-206ENST00000562668 CD2APQ9Y5K6 639 aa6.05□□□□□ -1.44
SMG1-206ENST00000562668 MEGF6O75095 1541 aa6.04□□□□□ -1.44
SMG1-206ENST00000562668 ZNF891A8MT65 544 aaPredicted RBP6.04□□□□□ -1.44
SMG1-206ENST00000562668 GOLGA6L6A8MZA4 724 aa6.04□□□□□ -1.44
SMG1-206ENST00000562668 NRP1O14786 923 aa6.04□□□□□ -1.44
SMG1-206ENST00000562668 POU3F2P20265 443 aaPredicted RBP6.04□□□□□ -1.44
SMG1-206ENST00000562668 AMPHP49418 695 aa6.04□□□□□ -1.44
SMG1-206ENST00000562668 MTHFSP49914 203 aa6.04□□□□□ -1.44
SMG1-206ENST00000562668 LRRC32Q14392 662 aa6.04□□□□□ -1.44
SMG1-206ENST00000562668 HOMER1Q86YM7 354 aa6.04□□□□□ -1.44
SMG1-206ENST00000562668 PASD1Q8IV76 773 aa6.04□□□□□ -1.44
SMG1-206ENST00000562668 UNC5BQ8IZJ1 945 aa6.04□□□□□ -1.44
SMG1-206ENST00000562668 MDGA1Q8NFP4 955 aa6.04□□□□□ -1.44
SMG1-206ENST00000562668 CHTF18Q8WVB6 975 aa6.04□□□□□ -1.44
SMG1-206ENST00000562668 PGBD4Q96DM1 585 aa6.04□□□□□ -1.44
SMG1-206ENST00000562668 PRRX2Q99811 253 aa6.04□□□□□ -1.44
SMG1-206ENST00000562668 PIF1Q9H611 641 aa6.04□□□□□ -1.44
SMG1-206ENST00000562668 PRKRIP1Q9H875 184 aaPredicted RBP6.04□□□□□ -1.44
SMG1-206ENST00000562668 GPRC5BQ9NZH0 403 aa6.04□□□□□ -1.44
SMG1-206ENST00000562668 USP36Q9P275 1121 aaKnown RBP6.04□□□□□ -1.44
SMG1-206ENST00000562668 THRAP3Q9Y2W1 955 aaKnown RBP6.04□□□□□ -1.44
SMG1-206ENST00000562668 KDRP35968 1356 aa6.04□□□□□ -1.44
SMG1-206ENST00000562668 SBF2Q86WG5 1849 aa6.04□□□□□ -1.44
SMG1-206ENST00000562668 IGSF1Q8N6C5 1336 aa6.03□□□□□ -1.44
SMG1-206ENST00000562668 OVOS2A0A0G2JMS6 1433 aa6.03□□□□□ -1.44
SMG1-206ENST00000562668 MFAP3LO75121 409 aa6.03□□□□□ -1.44
SMG1-206ENST00000562668 PCDH8O95206 1070 aa6.03□□□□□ -1.44
SMG1-206ENST00000562668 GAAP10253 952 aa6.03□□□□□ -1.44
SMG1-206ENST00000562668 GNAT2P19087 354 aa6.03□□□□□ -1.44
SMG1-206ENST00000562668 PTGS2P35354 604 aa6.03□□□□□ -1.44
SMG1-206ENST00000562668 NEK4P51957 841 aa6.03□□□□□ -1.44
SMG1-206ENST00000562668 DCAF17Q5H9S7 520 aaPredicted RBP6.03□□□□□ -1.44
SMG1-206ENST00000562668 MRGPRGQ86SM5 289 aa6.03□□□□□ -1.44
SMG1-206ENST00000562668 LRRTM3Q86VH5 581 aa6.03□□□□□ -1.44
SMG1-206ENST00000562668 NXPE1Q8N323 547 aa6.03□□□□□ -1.44
SMG1-206ENST00000562668 TCP11L2Q8N4U5 519 aa6.03□□□□□ -1.44
SMG1-206ENST00000562668 PPP1R14CQ8TAE6 165 aa6.03□□□□□ -1.44
SMG1-206ENST00000562668 FERMT2Q96AC1 680 aa6.03□□□□□ -1.44
SMG1-206ENST00000562668 RNPC3Q96LT9 517 aaKnown RBP6.03□□□□□ -1.44
SMG1-206ENST00000562668 DRC1Q96MC2 740 aa6.03□□□□□ -1.44
SMG1-206ENST00000562668 MNTQ99583 582 aa6.03□□□□□ -1.44
SMG1-206ENST00000562668 NRDE2Q9H7Z3 1164 aa6.03□□□□□ -1.44
SMG1-206ENST00000562668 IFT57Q9NWB7 429 aa6.03□□□□□ -1.44
SMG1-206ENST00000562668 THG1LQ9NWX6 298 aaKnown RBP6.03□□□□□ -1.44
SMG1-206ENST00000562668 PCDHB6Q9Y5E3 794 aa6.03□□□□□ -1.44
SMG1-206ENST00000562668 TNS1Q9HBL0 1735 aaKnown RBP6.02□□□□□ -1.45
SMG1-206ENST00000562668 TOGARAM1Q9Y4F4 1720 aa6.02□□□□□ -1.45
SMG1-206ENST00000562668 XDHP47989 1333 aa6.02□□□□□ -1.45
SMG1-206ENST00000562668 TNS2Q63HR2 1409 aa6.02□□□□□ -1.45
SMG1-206ENST00000562668 ADAMTS7Q9UKP4 1686 aa6.02□□□□□ -1.45
SMG1-206ENST00000562668 ELL2O00472 640 aaPredicted RBP6.02□□□□□ -1.45
SMG1-206ENST00000562668 FAM20BO75063 409 aa6.02□□□□□ -1.45
SMG1-206ENST00000562668 RPS6KA4O75676 772 aa6.02□□□□□ -1.45
SMG1-206ENST00000562668 STC2O76061 302 aa6.02□□□□□ -1.45
SMG1-206ENST00000562668 EVA1CP58658 441 aa6.02□□□□□ -1.45
SMG1-206ENST00000562668 RALBP1Q15311 655 aa6.02□□□□□ -1.45
SMG1-206ENST00000562668 TKFCQ3LXA3 575 aa6.02□□□□□ -1.45
SMG1-206ENST00000562668 RABL3Q5HYI8 236 aa6.02□□□□□ -1.45
SMG1-206ENST00000562668 ZBTB41Q5SVQ8 909 aa6.02□□□□□ -1.45
SMG1-206ENST00000562668 NAIF1Q69YI7 327 aaPredicted RBP6.02□□□□□ -1.45
SMG1-206ENST00000562668 PCSK4Q6UW60 755 aa6.02□□□□□ -1.45
SMG1-206ENST00000562668 ESPNLQ6ZVH7 1005 aa6.02□□□□□ -1.45
SMG1-206ENST00000562668 TOM1L2Q6ZVM7 507 aa6.02□□□□□ -1.45
SMG1-206ENST00000562668 APBB1IPQ7Z5R6 666 aaPredicted RBP6.02□□□□□ -1.45
SMG1-206ENST00000562668 CDYL2Q8N8U2 506 aa6.02□□□□□ -1.45
SMG1-206ENST00000562668 PIK3C3Q8NEB9 887 aa6.02□□□□□ -1.45
SMG1-206ENST00000562668 SLC25A43Q8WUT9 341 aaPredicted RBP6.02□□□□□ -1.45
SMG1-206ENST00000562668 ST8SIA2Q92186 375 aa6.02□□□□□ -1.45
SMG1-206ENST00000562668 LTV1Q96GA3 475 aaPredicted RBP6.02□□□□□ -1.45
SMG1-206ENST00000562668 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.02□□□□□ -1.45
SMG1-206ENST00000562668 TRPS1Q9UHF7 1281 aa6.02□□□□□ -1.45
SMG1-206ENST00000562668 PLEKHG2Q9H7P9 1386 aa6.02□□□□□ -1.45
SMG1-206ENST00000562668 MYPNQ86TC9 1320 aa6.01□□□□□ -1.45
SMG1-206ENST00000562668 BCL9O00512 1426 aa6.01□□□□□ -1.45
SMG1-206ENST00000562668 PPM1GO15355 546 aaPredicted RBP6.01□□□□□ -1.45
SMG1-206ENST00000562668 TGM5O43548 720 aa6.01□□□□□ -1.45
SMG1-206ENST00000562668 ALDH1A2O94788 518 aa6.01□□□□□ -1.45
SMG1-206ENST00000562668 PFKMP08237 780 aa6.01□□□□□ -1.45
SMG1-206ENST00000562668 KPNA1P52294 538 aaPredicted RBP6.01□□□□□ -1.45
SMG1-206ENST00000562668 C21orf62-AS1Q17RA5 79 aa6.01□□□□□ -1.45
SMG1-206ENST00000562668 FAM214AQ32MH5 1076 aa6.01□□□□□ -1.45
SMG1-206ENST00000562668 CCDC184Q52MB2 194 aa6.01□□□□□ -1.45
SMG1-206ENST00000562668 GPR158Q5T848 1215 aa6.01□□□□□ -1.45
SMG1-206ENST00000562668 Q6ZPA2 131 aa6.01□□□□□ -1.45
SMG1-206ENST00000562668 C16orf86Q6ZW13 317 aa6.01□□□□□ -1.45
SMG1-206ENST00000562668 ULK2Q8IYT8 1036 aa6.01□□□□□ -1.45
SMG1-206ENST00000562668 NINJ1Q92982 152 aa6.01□□□□□ -1.45
SMG1-206ENST00000562668 MTFR1LQ9H019 292 aa6.01□□□□□ -1.45
SMG1-206ENST00000562668 ENKD1Q9H0I2 346 aa6.01□□□□□ -1.45
SMG1-206ENST00000562668 ING3Q9NXR8 418 aa6.01□□□□□ -1.45
SMG1-206ENST00000562668 USP35Q9P2H5 1018 aa6.01□□□□□ -1.45
SMG1-206ENST00000562668 MSRAQ9UJ68 235 aa6.01□□□□□ -1.45
SMG1-206ENST00000562668 VIRMAQ69YN4 1812 aaKnown RBP6.01□□□□□ -1.45
SMG1-206ENST00000562668 MYBBP1AQ9BQG0 1328 aaKnown RBP6□□□□□ -1.45
SMG1-206ENST00000562668 DOT1LQ8TEK3 1739 aa6□□□□□ -1.45
SMG1-206ENST00000562668 GRXCR1A8MXD5 290 aa6□□□□□ -1.45
SMG1-206ENST00000562668 RAMP2O60895 175 aa6□□□□□ -1.45
SMG1-206ENST00000562668 SEC24DO94855 1032 aaPredicted RBP6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms